Eleginops maclovinus (Patagonian blennie): 134868016
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Entry
134868016 CDS
T09869
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emac03009
]
134868016 (ddx56)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134868016 (ddx56)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Pre-60S particles
Helicases
134868016 (ddx56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4495
AAA_22
Motif
Other DBs
NCBI-GeneID:
134868016
NCBI-ProteinID:
XP_063744941
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All DBs
Position
8:complement(14761374..14766741)
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AA seq
560 aa
AA seq
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MAAEMLHFHEMGFDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPVIQRILASKQSVREQDVRALILVPTKELGQQVQAMMRQLTAYCSRDVRVADITGKAD
LSAQRPILMEKPDVVVGTPSRVLAHLNAQNLVLHSSLEMLVVDEADLLFSFGFEADLKNL
LCHLPKIYQSFLMSATLTEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYGLKCEEEDK
FLLIYTLLKLRLVQGKTLVFVGAVDRSYRLKLFLEQFGIPACVLNSELPVQSRCHIITQF
NQGFYDYIIATDEQSLADPAAAPQATAGKGKKKKNTDKGGRVKDKEYGVSRGVDFQNVSN
VINFDFPMTVESYIHRVGRTARADNPGTALSFIAHTEIGLLSEVEDALTGDNSDCVLKPY
EFKMEEIEGFRYRCRDAMRSVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLLRH
DKDLHPAVIKPHLRNVPEYLIPETLKGVVNPLSNRRKKKKVKSKPDGVIKSSFKNIQGKN
PLKSFRYSGGRNRQSKPVKS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaatgcttcattttcatgaaatgggctttgacgaccgtcttttaaaggcg
gttgcagatctgggttggtcccagcccactctgatccaggagaaagcgatccctctggct
ctggaggggaaagaccttctagcacgagccaggactggttctggaaagaccgctgcttat
gctatccccgttatccagcgcattctggcctccaaacagagcgttagagagcaggacgtg
agagctctgatcttggtcccgaccaaagaactgggtcagcaggttcaggccatgatgaga
cagttaacagcgtactgctccagggacgtccgagtggccgacatcactggaaaagctgac
ctgtcagcacagaggcctattttgatggagaaacccgatgtggttgtgggaaccccgtca
cgtgtgctcgcccacctcaatgcccagaacctggttctgcattcgtcccttgagatgctg
gtggtagatgaggccgacctgctcttctcttttggcttcgaggcagacctgaagaacttg
ttgtgtcatttgccaaagatctaccagtcgttcctgatgtcggctactctcacagaagat
gttcaggccttaaaggagctgctgctgcacaaccctgtgatcctgaagcttcagggctct
cagctcccagacagcagccagctgcagcagtacggcctcaaatgtgaggaggaggataag
ttcctgctcatctacacgctgctgaagctgcggctggttcaggggaagacgctggtcttt
gtaggagcggtggaccgaagctacagactcaaactgttcctcgagcagtttggtattcct
gcctgtgtgctcaattctgagctgcccgtccagtccaggtgtcacatcatcactcagttt
aaccagggcttctacgactacatcattgccacagatgaacagagtttggccgaccccgct
gctgctccacaggcgacggcaggcaaaggaaagaagaagaagaacacagacaagggagga
agagtgaaggacaaagagtatggggtctccagaggggtggacttccaaaatgtttccaat
gtcatcaactttgatttcccaatgactgtagaatcatacattcatcgagttgggagaacg
gcgcgagctgacaaccccggcaccgctctgtccttcatcgctcacactgagattggtttg
ctgtcagaggtggaggacgctctcacaggagataactccgactgtgttctgaaaccgtac
gagtttaagatggaagagatagagggcttcaggtacaggtgcagggatgccatgcgttca
gtgacaaagcaggcggtgagggaggccagactgaaggagatcaaacaggagctgctcaat
tcagaaaaactcaagacatattttgaggacaaccccagagacctgcagctgctcagacac
gacaaagatctccatcctgctgtcatcaaaccccacctgaggaatgtgcctgagtacctc
attcccgagacactgaagggtgtcgtgaatccgttgtcaaacaggaggaagaagaagaag
gttaaatcaaaaccagatggagtcatcaagagcagcttcaagaacatccaggggaagaac
ccactgaagagtttccgatacagcggcgggaggaacagacaaagcaaaccagttaagtca
tag
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