KEGG   Eleginops maclovinus (Patagonian blennie): 134868562
Entry
134868562         CDS       T09869                                 
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:emac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emac03021]
    134868562 (chd1)
   03036 Chromosome and associated proteins [BR:emac03036]
    134868562 (chd1)
Transcription machinery [BR:emac03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     134868562 (chd1)
Chromosome and associated proteins [BR:emac03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     134868562 (chd1)
    SLIK complex
     134868562 (chd1)
SSDB
Motif
Pfam: SNF2-rel_dom HTH_Hrp3 CDH1_2_SANT_HL1 CHD1-like_C Helicase_C Chromo HDA2-3 DEAD CHDCT2
Other DBs
NCBI-GeneID: 134868562
NCBI-ProteinID: XP_063745862
LinkDB
Position
8:2596936..2617053
AA seq 1841 aa
MAGRSEEESVSNSGGESSNSDDESGSGSGSASGSASGSSSSSSSSSSQSGSSDSGSGSDS
GSGSDSDTEKAKEKIEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQQQ
QQQRQSSSNSGSDEDSSSSDGSDSSSGSKRRRNSGSSGSGSGSGSGSGSGSDSSAEEKSE
ETASDYEPSHKIKSRKPPTKMNYRNGKKSSNQKKKKSQNHSSSDDEDDEYKKAASAGPRR
QATVNVSYKEDDDLKTDSDDLVEVLGEDVPQPEEDEFETLERVMECRIGRKRATGSVTTV
YAIEADGDPNANYNPNKEPGDVQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKK
KDAEKKRWLKAASPEDIEYFNCQEELMDDLHSQYQIVERIIGMLSTSHVPLNTFNAFLGF
LPLNASLCAGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALIGKKFQKCIDNYMSRNQS
KNIPFRDCKVLKQRPRFVPMKKQPTYIGGEGLELRDYQLDSLNWMAHSWCKGHSCILADE
MGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSWQREIQLWAPHLNFVVYLGDISS
RNMIRTHEWMHVHNKRLKFNILLTTYEILLKDKSFLGAVSWAFIGVDEAHRLKNDDSLLY
KTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEEAHGKGRDSGYASLH
KELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSG
FLNVMMELKKCCNHCYLIKTPDEIEFLNRAEALQQLIRSSGKLVLLDKLLVRLKDRGHRV
LIFSQMVRMLDILAEYLKSRQFLFQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAG
GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTKSSVEEEIIERAK
KKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEELSSILKFGAEELFKEPEGEEQEP
QEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMDEEDLDMDSERSQRSWDDII
PEEQRRRMEEEERQKELEEIYLLPRMRNCAKQTSFNASSGRQSRNRRYSGSDSDSPSDRK
RPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPLERLDAIARDAELVDKSEHDLKR
LAETVHNGCVRTLRENPCGPEKSSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHK
AIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTH
KLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGTANSRKRKPRSKKSKTQKP
IKTEEVPKSTSSDPPSDKRSDDEDEIEEEKEVTPVKTPSRRARADRTVLKEEEDDEEEEE
EEEEEDEDEEPEQEEVSSSGETEIKEKEIKKESKKEKKEDSWDTQAKEPKEKKEPKPLEA
VYKEESLEKNEVKTKKAGDVPVDITVSGETGPVSEESEELDQRTFSVCKERMRPVKAALK
QLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTEFD
ARKLHKLYKHAIKKRQENAQAMEQNTRNANTHGYKNTDIERLKDNSHQDDSSRDSYSSDR
YPPSGRHHESSSKDRHSSEPHRKSSGGESRKRPYTSFSNGKDHRDRDHYRPDSRDRDRDR
DRDRDRQDRYYNDSKHRKLDEFRSRDHRLDMKDHSHSDHRSSYRYHSDWQAEQRASASGP
RSPRDQRSPYDSRSPMGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq 5526 nt   +upstreamnt  +downstreamnt
atggctggacgcagtgaggaggaaagtgtaagcaacagtggtggagaatcaagtaattct
gatgatgaatccggttctggatcgggctcagcgtcagggtccgcctcagggtccagttcc
agctcctccagcagcagcagccaatcagggagcagtgactcaggaagtggctcagactct
ggcagcgggtcagattctgacacagagaaagccaaggaaaagatcgaaccgccaaataag
tcaaacatcgacggagctgagttctggaaatccaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacagcagcttcagcaacagcaacaacagcagcagcagcagcag
caacagcagagacaaagctcctcaaacagtggatctgatgaggactcgtcaagtagcgat
ggatccgactcatcgagtggatccaaaaggagaagaaattcaggctcctctgggtccgga
tcaggctctggatctgggagtggttcaggatcagactcatccgccgaggagaagagtgaa
gagacggcatcagactatgagccgagtcacaaaatcaaaagcagaaagcccccgacaaag
atgaattatcggaacgggaagaagagcagtaaccagaagaagaagaagtcccagaatcat
tcttcttctgacgacgaggacgacgagtacaagaaggcggcgtcggcggggccacggcgg
caggccacggtcaacgtcagctacaaggaggacgacgacctgaagacggattccgacgac
ctggtggaggttctcggtgaagatgtcccgcagcctgaggaggacgagtttgagacgctg
gagagagtaatggaatgcaggatagggaggaaaagagcaacgggaagtgtcaccactgtg
tacgccatagaagcagacggggaccccaacgccaactacaatcccaacaaagagcccggt
gacgtccagtatctgataaagtggaagaactgggcgcacatccacaacacctgggagacg
gaggagacgctcaagttacagaacgtcaagggcatgaagaaactggacaacttcaagaag
aaggacgcggagaagaagagatggttaaaggcggcgtcaccggaggatatcgagtatttc
aactgtcaggaagagttaatggacgacttgcactctcagtaccagattgtggagcgaatc
ataggtatgctctccacatcacatgttcctctgaatactttcaatgctttccttggtttc
ctgccactaaatgcatctctctgtgcaggacattcaaaccagaagtcagcagcgggttac
ccagactacctgtgcaagtggcagggtcttccatattcggagtgcagctgggaggacggc
gctctgatcggcaagaagttccagaagtgcatcgacaactacatgagcagaaaccagtcc
aagaacattcctttcagagactgcaaggtgctcaaacagagacccaggtttgtgccgatg
aagaagcagccaacgtacatagggggtgaaggactggagctccgagactaccagctggac
agtttgaactggatggcccactcgtggtgcaaaggccacagttgcattcttgcggatgag
atgggtttagggaagaccatccagacaatctccttcctcaattacctgttcaacgagcac
cagctgtacggacccttcctgttggttgtgcctctctccacgctcacctcctggcagaga
gagatccagctttgggcccctcatttgaactttgtcgtctacctgggagacatcagcagc
aggaacatgatcaggacacacgagtggatgcatgttcataacaagaggctaaagtttaac
atccttctcacaacgtacgagattctcctcaaagacaagtcgtttctgggcgccgtcagc
tgggccttcatcggcgtggacgaggcgcatcgactgaagaacgacgactccctcctgtac
aagaccatgatggagttcaagtccaatcacaggcttctgatcacgggaacgccgctgcag
aactccctgaaggagctgtggtccctgctgcacttcatcatgccagagaagtttcactcc
tgggagctgtttgaggaggcgcacggtaaaggcagggactcgggctacgccagtctgcac
aaagagctggaaccttttctactgcggagagtcaagaaggacgtggagaaatctctccct
gccaaagtggagcagatcctccgagtggagatgagcgccatccagaaacagtattacaag
tggatcctgaccaggaactacaaggctctgagtaaaggtactaaaggcagcacgtcgggc
ttcctgaacgtcatgatggagctaaagaagtgttgcaaccactgctaccttatcaagacc
cctgacgaaatcgagttcctcaacagagcggaagccttacagcaactgatccgcagcagt
gggaagctggtgctgctggacaagctgctggtgcgtctgaaggacagaggccaccgggtc
ctgatcttctcccagatggttcggatgctggatatcctggctgaatacctgaagagccga
cagttcctctttcagagattagacggctccatcaaaggggagatgaggaagcaggcgttg
gatcacttcaacgccgagggctcggaggatttctgcttcttgttgtcaacgcgtgccggg
ggtctgggtatcaatctggcatccgcagacacagtcgtcatctttgactccgactggaac
ccccagaacgacctgcaggctcaggcccgagcacacaggatcgggcagaagagacaggtg
aatatctaccgtctggtgacgaaaagctcggtagaggaggagatcatcgagagggcgaag
aagaaaatggtgctggatcacctggtgattcagaggatggacacgacggggaaaaccgtc
ctccatacgggatctgctccctccagttctgccccgttcaacaaggaggagctgtcctcc
atcctgaagttcggggctgaggagctgttcaaagagccagagggcgaggagcaggagcct
caggaaatggacatcgatgagatcctgaaaagagccgagacccgggagaacgaccccggc
ccctccacagtgggggaggaactgctgtctcagttcaaggtggccaacttctccatgatg
gacgaagaggatctggacatggactcggagcgcagtcagaggagctgggacgatatcatt
cccgaggagcagaggaggcggatggaggaggaggagaggcagaaggagctggaggagatc
tacctgctgccccgaatgaggaattgtgccaaacagacaagctttaacgccagctcgggt
cggcagagcaggaacaggcggtactcgggctccgacagcgactccccctcggaccggaag
aggccaaagaagcgggggcggcctcggactataccaagagagaacatcaagggcttcagt
gacgctgagatccggaggtttgtcaagagctacaaaaaatttggaggaccgctggaaagg
ttggatgctatcgctcgtgatgcagagctcgtggataagtccgagcacgacctgaagcgc
ctggcggagacggtgcacaacggctgtgtgagaacactacgagaaaacccctgcggaccg
gagaagagctcaggaggcaggagagggaaggtaaagggcccgaccttcaggatctctggg
gtccaggtgaatgcaaagctggtcatctcccatgaggaagagctggctccgctccacaag
gccattcctgctgacccagaggagaggaagaagtatatgattccatgccactcgaaggca
gcacactttgatatcgagtgggggaaggaggacgactccagcctcctgataggaatatat
gagtacggttacggcagctgggagatgataaagatggacccggacctcaacctcacacac
aagctcctacctgacgaccctgacaagaagccacaagcaaaacagttgcagaccagagct
gactacctcatcaagttgctaagcaaggacctggccaagaaggaagcacagaagcaggca
gggacggccaactcacggaagaggaaaccgagaagtaagaagagcaaaacccagaagcca
attaagaccgaagaggtgccgaagagcacgtcctcggaccccccgtcggacaagaggtcg
gacgacgaggacgagatcgaggaggaaaaggaagtgacaccggtgaagacgccaagccga
cgggcccgagcagaccggacggtgctgaaggaggaggaggacgacgaggaggaagaggag
gaggaggaggaggaggatgaagatgaggagcccgagcaggaagaggtgtcttcgtcgggg
gagacggagattaaagaaaaggagatcaaaaaagaaagcaaaaaggagaagaaggaggac
agctgggacacacaagcaaaggagccaaaggagaagaaggagccaaagcctctggaggcg
gtgtataaagaggagagcctggagaagaacgaagtgaagactaagaaagccggggacgtg
ccggtcgacataacagtgagtggagaaactgggccggtgtctgaggagtccgaggagctg
gaccagaggaccttcagtgtgtgtaaggagaggatgcggccggtgaaagcagcgctgaag
cagctggaccgaccggagaaagggctgtcggagcgcgagcagctggaacacacgagacag
tgcctcatcaagatcggtgaccacatcaccgagtgtctgaaggagtactcgaaccctgag
cagatcaagcagtggagaaaaaacctgtggatatttgtttctaaattcacggagtttgac
gccaggaaactacataaactgtataagcatgcaatcaagaagagacaggagaatgcccag
gcaatggagcagaacactagaaatgcaaacacacacggctacaaaaacacagatatcgaa
cggctgaaggacaactctcaccaggacgacagcagcagggacagctacagctcggacaga
tacccgccgtcggggcgacaccacgagagcagcagcaaggaccgacacagctccgagccg
cacaggaagtcgtcgggaggggagtccaggaaaagaccgtatacctccttcagcaacggc
aaagaccacagagacagagaccactacagaccggacagcagggacagagaccgagaccga
gacagggaccgagaccgacaggacagatactacaacgacagcaagcacaggaagctggac
gagttccgctccagagaccaccggctggacatgaaggaccactcccactcggaccaccgc
tcctcctaccgctaccactcggactggcaggcggagcagcgggcctcggccagcgggccc
cgctccccccgggaccagcgctcgccctacgactcccgctcgcccatgggacaccgctcg
cccttcgactactcgtcggaccacaagagcacaccggagcagatctggagcagccgcaag
acataa

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