Eleginops maclovinus (Patagonian blennie): 134868766
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Entry
134868766 CDS
T09869
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134868766 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134868766 (prpf4)
Spliceosome [BR:
emac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134868766 (prpf4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
eIF2A
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_like
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
134868766
NCBI-ProteinID:
XP_063746137
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All DBs
Position
8:193047..199891
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AA seq
505 aa
AA seq
DB search
MSDDDDAPVMKRSRVYYGSLEERERERLGGERGRGGDALKAGIKAGNINISSGETMEMEE
RVSEHQHEALAAFERRRRARQITVSTDDAEVKAGLRALGEPIILFGEGPADRRERLRGVL
SVVGPDALKKSRREDERSKRSQEECQQTWYHEGSASLKDARLWLAKYSLPRAMRRLEEAR
VQKDVAEATRAIRQQEQQKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGLCKL
WSVPDCSLLRTLRGHNTNVGAIVFRPQAGVSLDQSDVSLASCAGDGSVKLWNLESDEPVA
DIEGHSERVSRVSWHPSGRFLGTSSYDKSWRLWDLEVQEEILHQEGHSKGVHDLSFHPDG
SLAATGGLDSFGRVWDLRTGRCVMFLEGHLKEIYTLHFSPNGHHLATGSGDNTCKVWELR
NRKCLYTVPAHQNLVSAVRFQPTDGHFLLTGAYDNTAKVWSHPGWTPLKTLAGHEGKVMG
VDVSPDGKLIATSSYDRTFKLWLTE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgatgatgctccggtgatgaagaggagtcgagtttactatggcagcctg
gaggagagagagagggagaggctggggggagagcgagggagagggggggacgccctgaaa
gccggcatcaaggcaggaaacatcaacatctcctcaggagagacgatggagatggaggag
cgtgtcagcgagcatcagcacgaggcgctggcagcgtttgagcggcggcggcgagcgcgg
cagatcaccgtctccaccgacgacgccgaggtgaaggccggtctccgagcgctgggagag
ccaatcatattgttcggagagggaccagctgaccgcagggagagactaagaggagtcctc
tcggtggtcggacctgacgctctgaagaaatccaggcgagaggatgagaggagcaagagg
agccaggaggagtgccagcagacctggtaccacgaaggctctgcctccctgaaagatgct
cgcctctggttggccaaatactctctgccacgggcgatgaggcgtctggaggaggcacgt
gttcagaaggatgttgccgaggcgaccagagcgatccgacaacaagagcagcaaaagagc
ctgaggaatctgaataatttctgcagtcagatcggagacgatcgtccaatcagcttctgc
catttcagccccgactctaagatgctcgccacagcctcgtggagcggtctgtgtaagctg
tggtccgtccccgactgcagcctgctgcgcactctgagaggacacaataccaacgtgggc
gccatcgtgttccgcccacaggccggagtctctctggaccaatcagatgtcagcttagcc
tcctgtgctggagacggctccgtgaagctgtggaacctcgagagtgatgagccggtggcg
gacatagagggtcacagtgagagagtgtctcgcgtctcctggcatccatcagggagattc
ctggggacatccagctatgacaagtcgtggcgtctgtgggacctggaggtccaggaggag
atcctccatcaggagggtcacagcaaaggagtccatgacctcagcttccaccccgacggc
tcgctggctgccaccggagggctggattcgttcggcagggtgtgggatcttcggaccgga
cgctgcgtcatgttcctggagggacacctgaaggagatctacaccctacacttctccccc
aacgggcatcacctggcgacaggaagtggagacaacacctgtaaggtgtgggagctgagg
aacaggaagtgtctgtacacagtccccgcccaccagaacctggtctctgcggtccgcttc
cagcccacagacggtcacttcctgttgaccggcgcctacgacaacacggcgaaggtctgg
agccacccgggctggacgccgctgaagacactcgccggacacgaggggaaggtgatgggc
gtcgacgtttccccggacgggaaactgatcgcgacgagttcatatgaccgcaccttcaaa
ctgtggctgaccgagtga
DBGET
integrated database retrieval system
