KEGG   Eleginops maclovinus (Patagonian blennie): 134868766
Entry
134868766         CDS       T09869                                 
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134868766 (prpf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:emac03041]
    134868766 (prpf4)
Spliceosome [BR:emac03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    134868766 (prpf4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st NBCH_WD40 PRP4 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT122_1st WD_LRWD1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 eIF2A Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_like WD40_RFWD3 Beta-prop_WDR11_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 134868766
NCBI-ProteinID: XP_063746137
LinkDB
Position
8:193047..199891
AA seq 505 aa
MSDDDDAPVMKRSRVYYGSLEERERERLGGERGRGGDALKAGIKAGNINISSGETMEMEE
RVSEHQHEALAAFERRRRARQITVSTDDAEVKAGLRALGEPIILFGEGPADRRERLRGVL
SVVGPDALKKSRREDERSKRSQEECQQTWYHEGSASLKDARLWLAKYSLPRAMRRLEEAR
VQKDVAEATRAIRQQEQQKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGLCKL
WSVPDCSLLRTLRGHNTNVGAIVFRPQAGVSLDQSDVSLASCAGDGSVKLWNLESDEPVA
DIEGHSERVSRVSWHPSGRFLGTSSYDKSWRLWDLEVQEEILHQEGHSKGVHDLSFHPDG
SLAATGGLDSFGRVWDLRTGRCVMFLEGHLKEIYTLHFSPNGHHLATGSGDNTCKVWELR
NRKCLYTVPAHQNLVSAVRFQPTDGHFLLTGAYDNTAKVWSHPGWTPLKTLAGHEGKVMG
VDVSPDGKLIATSSYDRTFKLWLTE
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctgacgatgatgatgctccggtgatgaagaggagtcgagtttactatggcagcctg
gaggagagagagagggagaggctggggggagagcgagggagagggggggacgccctgaaa
gccggcatcaaggcaggaaacatcaacatctcctcaggagagacgatggagatggaggag
cgtgtcagcgagcatcagcacgaggcgctggcagcgtttgagcggcggcggcgagcgcgg
cagatcaccgtctccaccgacgacgccgaggtgaaggccggtctccgagcgctgggagag
ccaatcatattgttcggagagggaccagctgaccgcagggagagactaagaggagtcctc
tcggtggtcggacctgacgctctgaagaaatccaggcgagaggatgagaggagcaagagg
agccaggaggagtgccagcagacctggtaccacgaaggctctgcctccctgaaagatgct
cgcctctggttggccaaatactctctgccacgggcgatgaggcgtctggaggaggcacgt
gttcagaaggatgttgccgaggcgaccagagcgatccgacaacaagagcagcaaaagagc
ctgaggaatctgaataatttctgcagtcagatcggagacgatcgtccaatcagcttctgc
catttcagccccgactctaagatgctcgccacagcctcgtggagcggtctgtgtaagctg
tggtccgtccccgactgcagcctgctgcgcactctgagaggacacaataccaacgtgggc
gccatcgtgttccgcccacaggccggagtctctctggaccaatcagatgtcagcttagcc
tcctgtgctggagacggctccgtgaagctgtggaacctcgagagtgatgagccggtggcg
gacatagagggtcacagtgagagagtgtctcgcgtctcctggcatccatcagggagattc
ctggggacatccagctatgacaagtcgtggcgtctgtgggacctggaggtccaggaggag
atcctccatcaggagggtcacagcaaaggagtccatgacctcagcttccaccccgacggc
tcgctggctgccaccggagggctggattcgttcggcagggtgtgggatcttcggaccgga
cgctgcgtcatgttcctggagggacacctgaaggagatctacaccctacacttctccccc
aacgggcatcacctggcgacaggaagtggagacaacacctgtaaggtgtgggagctgagg
aacaggaagtgtctgtacacagtccccgcccaccagaacctggtctctgcggtccgcttc
cagcccacagacggtcacttcctgttgaccggcgcctacgacaacacggcgaaggtctgg
agccacccgggctggacgccgctgaagacactcgccggacacgaggggaaggtgatgggc
gtcgacgtttccccggacgggaaactgatcgcgacgagttcatatgaccgcaccttcaaa
ctgtggctgaccgagtga

DBGET integrated database retrieval system