| Entry |
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| Symbol |
taf1c
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| Name |
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
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| KO |
| K15214 | TATA box-binding protein-associated factor RNA polymerase I subunit C |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:emac03021]
134868903 (taf1c)
Transcription machinery [BR:emac03021]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
134868903 (taf1c)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(2870198..2880612)
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| AA seq |
1061 aa
MTNKMDYQFPKQLFPSFYNCGPPDLVLKHCAGNWGCYDRVRPQGGSGPLSSWTFTSRHQV
GGEAWRHTEPVPVPLLSPKNSFPWLSTPPDPQDFTEHMQNFFMDHCQDAFGSISGILSEN
LNLKPGRKGKSRSDSVYMTKMENIIKKVKLKRCPFSFDSTVLDRYGTLLSDVLPAVPPEL
LGSLLYEELEEQRERMLFCEAATGGALAFIPFSQSGSDPQRGCLLYPGNQGLDFLNFHRV
ELQQHRGTPSCLDASSCELSTFQLQGPVRQISAASLINDCCVAVRSDHLCGVWRFSEGNK
PQLMEVVNTKEVGTCISVSPHVLGEVLVASESGAVNLWTVGKRMQKVRKEEEYLYFNAKS
SWRWCEFSAHPRVMQYADRTGVELCDIRMSPVSNHTLFRIGNTSECRSGERLILSRYLAD
VHPFHHLITTQYSAYIMDERFPCMPVLKWDHMMQSPPMFCHTVPGSDPSRTAKVLLGSHS
SQEITLLQYSGGRAEACSSRGPPQALLRPRDSLRHLPVQIPHRLELATSRLSIPAAGLTC
IHKRGGGGEECICILQLTEAGDIFYQILEPEQPHTPPQAPERNTPSGIKVAERPPHSLNL
TSATSSDEDIIGPNQVLSYVPETPERERPELEIYSSSSESESQSKTRYMKRLHMQLQVID
NVNVDHGNESDTAGVSAETVSEEKAEIPEESSRMEEPSSSVQKLSDGVVVTWKQWLQKLM
QKSRENKPRPQRRQPYKVPTEDLLHLSGVQARGEDSAEKERMENLRRDLRACMTSRSLLV
HSAVSASLGDQEVVAVPNAVDTDTWKDPTSERFTVSWQGEGAWQAWWEENLGLNRGKKVE
ALRRKRKREKEARRSSSQQSVLSGSFTSSLCYQSDLSDFSNLSGWSSTASQGVWSDSGGA
LSQAEDSIENGSRRATTPSSVQTDAPVPTLTPTPTPTPQRDKQASQTPSSTRAPPPTPKS
LKKSKRQTDYLSALFAPQDEPSQHGGYFLEEDSTVHHKPPPVASSSYQLHSSQSASLRSV
RTGFSQSLTPSRSLTPSQSSQGRPGLSQTSQTKKKKPRMGF |
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| NT seq |
3186 nt +upstreamnt +downstreamnt
atgacaaataaaatggattaccagttcccaaagcaacttttcccttcgttctacaactgc
ggacctccagacctggtcctgaaacactgcgcaggaaactggggctgctacgaccgagtc
cgacctcagggcggttctggtcctctctccagctggacatttacctccaggcatcaggtc
ggaggggaggcatggcgtcacacggagccggtaccagttcccctcctgtcccctaaaaac
tctttcccctggctttcgacgcctccagatccacaggatttcaccgaacatatgcagaac
ttcttcatggaccactgccaggacgccttcgggagcatcagtggaattctgagtgaaaac
ttaaacttaaaaccaggacgaaaagggaaatctcgcagcgactccgtctacatgacgaaa
atggaaaacatcatcaaaaaggtgaagctcaaaaggtgtccgttctcctttgactccacg
gtgctggacaggtacggcaccctgctgtcggacgtgctgcccgccgtgccccccgaactg
ctgggctccctgctgtacgaggagctggaggaacagagggaacgcatgctgttctgtgaa
gcagccacagggggcgctctggccttcatccctttctcacagagcggcagcgaccctcag
cgcggctgcctcctctaccccgggaaccaggggctggacttcctcaacttccaccgggtg
gagctgcagcagcacagagggaccccctcctgtttggacgccagcagctgtgagctttcg
accttccagctgcagggccccgtcagacagatcagcgccgcctcgctgatcaatgactgt
tgtgtggcagtgcgctcggatcacctgtgtggagtttggaggttcagtgagggaaacaag
cctcagctgatggaagtggtcaacactaaagaggtcgggacctgcatcagtgtcagtcct
catgttctgggtgaagttctggtggcgagtgagagcggagcagtgaacctgtggaccgtc
ggcaaaaggatgcagaaggtccggaaggaggaggagtacctgtacttcaacgccaagtct
tcgtggcgatggtgcgagttctccgcccatcccagggtgatgcagtatgcggacaggacg
ggggtggagctctgtgacatccggatgagtcccgtctcaaatcacactctgtttcgtatc
ggcaacacctcagagtgtcgcagcggagagagactcatcctgtccagatacctggcagac
gtccaccccttccaccacctcatcaccactcagtactcggcctacatcatggacgagcgt
ttcccctgcatgcccgtgctcaagtgggatcacatgatgcagtctccgcccatgttctgt
cacactgtcccgggctccgacccctccaggaccgccaaggtgctgctgggctcccacagc
tcgcaggaaatcaccctgctgcagtactcaggagggagagcagaagcctgttccagtcgg
ggtcctcctcaggcactgctcagacccagggacagcctgagacaccttcctgtccaaatc
ccccaccgcctggagcttgccaccagcagactgtctataccggcggcaggtctgacttgt
atccacaagagaggaggaggtggtgaggagtgtatctgtatcctgcagctgacggaggca
ggggatattttctaccagatcctggagcccgagcagccacacacccctccacaggctccg
gaaagaaacacaccttcagggataaaagtagccgagcgaccaccgcattctctcaatctc
acatcggccacatcgagcgacgaagacatcatcggccctaatcaggtgctgagctacgtg
cctgaaactccggagagggaacgaccagaactggagatttactcttcctctagcgagtcc
gagtcccagagtaagactcgttacatgaagcgtctgcatatgcagctgcaggtcatcgac
aatgtcaacgtggatcatgggaatgaatcggatacagcgggtgtgagtgcagagacagtg
agtgaagaaaaagctgagatcccagaggaatccagcaggatggaggaacccagcagcagc
gtccagaagctcagtgacggtgttgtggtcacgtggaaacagtggctgcagaaattgatg
caaaagagtcgtgagaataagccccgcccacagcgcaggcagccctacaaggtcccgact
gaagacctcctccacctgtctggcgttcaagcgagaggagaggactctgcagagaaggaa
cgcatggagaacctgaggcgggatctccgagcgtgcatgactagtcgctcgctgctggtt
cacagcgccgtctccgcctccctcggggatcaggaggtggtggcagtgcccaacgccgtg
gataccgacacatggaaagatccgacgagcgagcgcttcacggtgtcctggcagggcgag
ggggcctggcaggcgtggtgggaggagaacctggggctgaaccgggggaagaaggtggag
gctctgaggaggaagaggaagagggagaaggaggcgaggaggtcgtctagtcagcaatcg
gtgctgtccggcagcttcacctcgtccctctgctaccagtcggacctgagcgacttttca
aatctgtccggctggtcctccaccgccagccagggggtgtggtccgacagcgggggggca
ctgtcccaggcggaggactcgatcgagaatgggtcgcgacgggctacgacaccctcatcc
gttcaaacagacgctccagtccccacgctgacccccacgccgacccccacgcctcagagg
gataaacaagcaagccagaccccaagcagcactcgcgccccgccccctaccccaaagagt
ctgaagaagagcaaacgccagacagactacctcagcgctctgttcgctccgcaggatgag
ccctcgcagcacggcggttatttcctggaagaggacagcacggtgcaccacaagcctcca
cctgtggcctcgtcctcctaccagctccacagctcccagtccgcctctctgaggagcgtc
aggaccggtttctcccagtccctgaccccctcccggtccctgaccccctcccaaagctcc
caggggagaccggggctttcccagacatcacagaccaagaagaagaagcctcggatggga
ttctga |
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