Eleginops maclovinus (Patagonian blennie): 134869446
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Entry
134869446 CDS
T09869
Symbol
rorca
Name
(RefSeq) LOW QUALITY PROTEIN: RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emac03000
]
134869446 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
emac03310
]
134869446 (rorca)
Transcription factors [BR:
emac03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134869446 (rorca)
Nuclear receptors [BR:
emac03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
134869446 (rorca)
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134869446
NCBI-ProteinID:
XP_063747137
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Position
9:23337127..23350959
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AA seq
474 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAALGVREENTDTAD
HSRTYRRVSSTTLSDLDDITMLQEGLLFDLPLTPEDAGREYCNLDMLGGSAGSSSSAQSS
PEQTSLDFAEGNHSIKHEYQLLHDSDXFSHAILNPLPEGCSMLEIERITQSVLKSHIETS
HYSTEELKRMAWTLYSPEETRSFQTKSAEVMWQQCAVHITNAIQYVVEFAKRISGFLDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFATAHLFKALGCDDLVNGVFDLAK
SLSRIQMSEEEMALFSAAVLLSPDRPWLTDVQKIQKLQEKVYVALQRCLQKEGASEQKLA
KMVSKLPVLKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtaataccgtgtaaaatatgtggggacaaatcatctgggatt
cactatggtgtcattacctgtgaaggctgcaagggttttttccgccgcagccagcagaac
aatgctatgtactcctgctcgcgacagaggaactgtttaattgacaggaccaaccgtaac
cgttgtcagcactgcaggctgcagaagtgtctcgctcttggcatgagccgtgatgcggtt
aagtttggccgaatgtccaaaaagcagcgtgacagcctgtatgcagaggtccagaagcac
cagcagtcccaggagtgtgcggcgctcggagtccgcgaggagaataccgacacggccgac
cacagccgcacctacagaagagtctccagcaccacgctcagcgatctggacgacattact
atgctgcaagaaggcctgcttttcgacctgccgctgaccccggaggacgcggggagagag
tactgtaacctggacatgctgggcggcagtgcaggcagcagctcctccgctcagagttca
ccagaacagaccagcttggactttgcagaaggcaaccacagcatcaagcatgagtaccag
ctgttgcacgactcggacntcttctcacatgctatcctcaacccgctgcctgagggctgc
tccatgctcgagatagagcgtatcactcagagtgtcctgaagtcccatattgagacgagc
cattacagcacagaggagctgaagaggatggcgtggaccctgtacagcccggaggagacg
cgctcattccagaccaagtcagctgaggtgatgtggcaacaatgtgccgttcacatcact
aatgcaatccagtacgtggtggagtttgccaagcgcatctctggcttcctggacctgtgt
cagaacgatcagatcatcctcctcaaagcaggctgcatggatgttcttctaatccgcatg
tgtcgggcctataaccccatcaacaacacaatgctgtttgatggaaagtttgccactgca
catctcttcaaagctctcggctgtgacgaccttgtgaatggagttttcgacttagctaaa
agcctgagtcgtattcagatgtcagaggaagagatggctctcttcagcgctgctgtgctg
ctctctccagaccgcccctggctgacagatgttcagaagatacagaagttgcaggagaaa
gtgtacgtggctctgcagcgctgcctacagaaagagggagcgtcagaacagaaactagct
aagatggtgtctaagcttcccgttctgaagtccatttgcaaccttcacatcgacaaactg
gagtttttccgtctggtccaccccgagacagcgtacaccttccctcctctgtacagggag
gtatttggcagcgaaatcaccttcccagactccacagagggctag
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