Eleginops maclovinus (Patagonian blennie): 134869474
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Entry
134869474 CDS
T09869
Symbol
ptbp1b
Name
(RefSeq) polypyrimidine tract-binding protein 1b isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134869474 (ptbp1b)
03041 Spliceosome [BR:
emac03041
]
134869474 (ptbp1b)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
134869474 (ptbp1b)
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134869474 (ptbp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
134869474
NCBI-ProteinID:
XP_063747191
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All DBs
Position
9:complement(26117169..26135766)
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AA seq
545 aa
AA seq
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MDGPGLSLSKLSYSSTEMQFQRGSEELFPSVSSAPYIMSTTANGNDSKKFKGDIRGPGVP
SRVIHIRKLPTDISEAEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTL
VPIIRHHPVYIQFSNHKELKTDNSPNQERAQAALRALTSSHVDAAVVAPSTVLRVVVENL
IYPVTLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYADGTSAQSAKLSLDGQNIYNGCC
TLRISFSKLTSLNVKYNNEKSRDFTRPDLPSGDSQPTMEHPGMATAFTPGIISAGPYGAA
THAFPPAFTLQPTMSSHYPGLVPTMPGGALASLSLPGASRLGFPHISAGVSVLLVSNLNP
ERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDCTQAQLAMSHLSGQQLHGKPLRI
TPSKHTSVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVV
EDDLKMLFSTSGAMVKAFKFFQKDHKMALIQMGSVEEAIESLIEFHNHDLGENHHLRVSF
SKSSI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcctggtctctctctctctaaattaagttactcttctaccgagatgcaattt
cagagaggatctgaagagctcttccccagcgtctccagcgccccgtatatcatgagcacc
acagccaatggcaacgacagtaagaagttcaaaggtgacataagaggtcccggtgtgccg
tccagggtcatccacatccgaaagcttccgactgacatcagcgaggccgaggtcatcagc
ctcggtctgcccttcggagacgtcaccaacctgctgatgctcaaagccaaaaaccaggcc
ttcttagagatgaactcggaggaagcggctcagaacatggtgggatattactccaccctg
gtgcccatcatcaggcaccacccggtctacatccagttctccaaccacaaggagctgaag
accgacaactcccccaaccaggagagggcccaggcggctcttcgggccctcacttcatca
catgtggacgcggccgtggtggctccgagcaccgtgctgagggtggtggtggagaacttg
atctaccccgtcacactggacgccctctgccagatcttctcaaagttcggcacggtgctg
aggatcatcgtcttcactaagaacagtcagttccaggctctgctgcagtacgccgacgga
acctccgcccagtcggccaaactgtctctggacggacagaacatctataacggctgctgc
actctgaggatcagcttctccaaactcaccagcctcaacgtcaagtacaacaacgagaag
agccgcgacttcaccagaccagacctgcccagcggggacagccagcccaccatggagcac
cccggcatggccaccgccttcactccaggtatcatctcagccgggccgtacggagcagcg
acccacgccttcccccccgccttcaccctgcagcctacaatgtcctcccactatccaggc
ctggtccccacgatgcccgggggagccctggcctccctatccctccctggagcctccagg
ctgggcttcccccacatctctgcaggagtctctgtcctgctggtcagcaacctgaaccca
gagagagttacgccccactgcctctttattctcttcggtgtttatggtgacgtgatgaga
gtgaagatcctgttcaacaagaaggagaacgctctggttcagatgtcagactgcacacag
gctcagctagccatgagccacctgagcgggcagcagctgcacgggaagcctctgcgcatc
acgccgtccaaacacacgagcgttcagcttccccgtgaaggccacgaggaccagggcctg
accaaagactacagcaactcccctctgcaccgcttcaagaagcccggctccaaaaactac
tccaacatcttcccaccttctgccaccctgcacctctccaacatcccgccgtctgtggtg
gaggacgacctcaagatgctgttttccacatcaggagccatggtcaaggccttcaagttc
ttccagaaggaccacaagatggctctgatccagatgggttcggtggaggaggccatcgag
tccctcatcgagttccacaaccacgacctgggagaaaaccaccacctgcgggtctccttc
tccaagtcctccatctga
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