Eleginops maclovinus (Patagonian blennie): 134870539
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Entry
134870539 CDS
T09869
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134870539 (rnf40)
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134870539 (rnf40)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
134870539 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
134870539
NCBI-ProteinID:
XP_063748803
LinkDB
All DBs
Position
10:complement(5738372..5749759)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPAPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLDENVQVLRKRIEPGTPL
SSTPAPPAPPLPEPTPMEEDGVNLASPTCTVPPPPLPASPNGGELAEKQDEHQEERLEGQ
KQPPLPTGSEDLTPKEPPQDSTTDASSPPPPLSDNAKGFLVTLEHSSEEELSLHLQDRMQ
FSKEAIACLVCVFDRLHSRIDSMCKQVQAAACDDDSQSDIINENHTLLDENTRLRDLAIL
LQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQ
LKSGYSTGSSGGISGGQITLNIQKFESLNAELEHNAELANSRMAELEKLQAELQEAVRES
EKLKMDLRNIPEDVVKETVEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQI
EHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLI
SSLQNHNLQLKGDVQRYKRKLRETQMEINKMRCQSGDTGVLILEETAADSVDVKKEDDED
QEEEEERRKELERQRAREREREREAERERERERERERQRSDELKRKDSDTLKMLRVELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKL
ADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLRE
KDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQST
LAALEKELTVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERE
SSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVLT
KCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgccgggggaggaaaacgtccctcaggaggggacagcccccctgccccacct
gagaagaagagcaaaaaggaggagaagaccacaaccactcttatagagcccatacgcata
gcaggagtgtcgtctacggaggaaatggacatgaaggtcctccagttcaagaataagaag
ctatgcgagcgtttggagcagagacaaacgatggaggacgagttgcgagagaaaattgag
aagctggagaagagacaggccacagatgacaccaccctgctgattgtcaaccgctactgg
tcgcagttggacgaaaatgtgcaagttctgcggaaacgtatcgagccaggcactccattg
tcatcaacccctgccccacctgcaccccctctccctgaaccaacaccaatggaggaagat
ggtgtcaatctggcctcaccaacttgtactgttcctccacctcctctaccagcgagtcca
aatgggggggagctggcagaaaagcaggacgagcatcaggaagagcggctggaagggcag
aagcagccccctcttcccactgggtcagaagatttgacccccaaggagccgccacaggac
tcaacaacagatgcatcgtcgccccctcctcctctaagtgacaacgctaagggcttcctg
gttacattggagcacagcagcgaggaggagctcagcctgcacctccaagatcgcatgcag
ttcagcaaggaagccatcgcctgtttggtctgcgtctttgacagactacacagccgcatc
gacagcatgtgcaagcaggtccaggctgcagcatgtgatgacgatagccagtccgacatc
atcaatgaaaaccacactctgctggatgaaaacactcgactgcgagacctggccattctg
ctgcagggccgacaccacaagatgtccatggagtacaacgagttagtggacaaggtgaca
agctctgagaccaaggtgtctgagatggagacgacggtggaggacctgcagtgggacatc
gagaaactccgcaatagggaacagaagctcaacaaacatctggcagaagccatggagcag
ctgaagtccggatacagcaccggcagctcaggaggaatctctggaggccagattactctg
aacattcagaagtttgagagtctcaacgcagagttggaacacaacgcggagttggcgaat
agccgcatggcagagctggagaaactgcaggcggagctgcaggaggcagtgagggagagt
gagaagctcaagatggatttgcggaatattccagaagacgttgtgaaggagactgtcgag
tacaaatgtctgcagtcgcagttctccctgctgtacaacgagtccctgggggtgaaaacc
cagctggatgaagcacgcgccctcctgctcaccgccaagaacgcccacctccgacagatc
gagcacatggagagtgatgagctgtcccttcagaagaagctgcgcactgaggttatccag
ctagaggacaccctggcccaggtgcgcaaggaatacgagatgctgcggatcgagtttgag
cagaacctggcagccaacgagcaagcagggccaatcaacagagagatgcggcatttgatc
agcagccttcagaaccacaacttgcagctgaagggtgacgtgcagcgctacaagaggaag
ctgcgggaaacccagatggagatcaacaagatgcgttgtcaaagtggcgacacgggggtt
ctgatcctcgaggagacggcggctgacagcgtcgacgtgaagaaagaggacgatgaggac
caggaggaagaggaggagaggaggaaggagctggagaggcagcgggcccgggagagagag
agggaaagggaggccgagcgagagcgggaaagggagcgggagagagagaggcagcgcagc
gacgagctgaagaggaaggactcggacacgctgaagatgctcagagtagaactcaagaaa
gctcaggagtcccagaaagagatgaagcttttgttggacatgtacaaatcagccccaaaa
gagcagagggacaaagtgcagctcatggcggctgaacgtaaatctaaagctgaggtggat
gagctgaggatgcgggtgcgagagctggaggagcgggagaggaaggagagcaagaagctg
gcggatgaagatgccctcaggaagatccgagtggcggaggagaccattgagcatctgcag
aagaaactggctgcaactaaacaggaggaggaagccctgctgagtgagatggatgttaca
ggccaggccttcgaggacatgcaggagcagaacagccgcttgttgcaacagcttcgagag
aaagacgacgccaacttcaagctgatgagcgagcgaatcaaatccaaccagatctacaag
ctgctgaaagaggagaaggaggagctggctgaccaagttctcacattcaaaacccaggtg
gatgcacagctgctggttgtgcagaaactcgaggagaaagagggcgtcctgcagagcaca
ctcgccgctctggagaaggagctgacggtccggacacaagcactagaactcaacaagagg
aaggcggtggaggctgcccagctggcagaggacctgaaggtgcagctggaacacacgcag
gccaagctaaaggagatccaggtctctgtggctgagaaccgcaccgcccgggagagggag
agctccaacctgaagagagcacaggaggatctgtcgaggctgaggcggaagctggagaag
cagaagaaggtggaggtgtactctgacgctgatgagatcctgcaggaggagatcaaccag
tacaaggccaagctgcgctgcccctgctgcaacacacgagacaaggagacggtgctcacc
aagtgtttccacgtgttctgctacgaatgtctgaagatgcgttacgacacccggcagagg
aagtgccccaagtgcaactgcgccttcggggccaacgactttcaccgaatctacatcacc
tag
DBGET
integrated database retrieval system
