Eleginops maclovinus (Patagonian blennie): 134870749
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Entry
134870749 CDS
T09869
Symbol
pms2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03430
Mismatch repair
emac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134870749 (pms2)
03460 Fanconi anemia pathway
134870749 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emac03400
]
134870749 (pms2)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134870749 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
134870749
NCBI-ProteinID:
XP_063749205
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Position
10:complement(4639275..4644488)
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AA seq
848 aa
AA seq
DB search
MSDACTAEPAGAIKAIDKQSVHQICSGQVVLTLATAVKELVENSIDAGATNVDVRLKECG
AELVEVSDNGKGVEEANFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSGLSV
VTCHESSQVGTKLVFDLKGHLVQQSPHPRQHGTTVSLQQLFYTLPVRYKEFQRNIKKEYA
KMIHVLQSYCIISTGVRITCSNQNGQGKRSTVLSTTGSQSMRDNIGAIFGPKQLQSLLPF
QQVSPAENIIEEYGLTEADLPKQLFTMSGFVSRADHGVGRSSTDRQFFFINNRPCDPVKV
TKLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLINM
YESGVNKISLNYTLKSMNTKSASEICQVFPSNENTPEPAEEKEHVTRCPKSSVNFAGLKA
AFSSNHTSSHGNKTSVAKAANSGPTQKTLQTFFKDTVRPPTCNSKASPLKATRDLAEFSP
VGKSVLDGFRYGKMSCSDADSEKDSTVTVPSADIQVSGLEIRTSEPDTDCVKHEEESDDI
DTVPEHLKTEPHTSNEDCPVSPDAKRARKEKPDSQIEDKSNTFSESASTVDAPMSLPKRA
VPSSFSLQDLSGRVKRLQDLQRQRDSDELRYRRFRAKINPGENNSAEEELKKEISKDMFK
EMEIIGQFNLGFIIAKLNSDIFMIDQHATDEKYNFEMLQQHTVLQGQKLIVPQKLHLTAV
SENVLMENIEIFRKNGFEFLIDEDGQVMERVKLVSLPTSKNWTFGPGDIEELIFMLSDSP
GVMCRPSRVRQMFASRACRKSVMIGTALSVTEMKKLLVHMGEIEQPWNCPHGRPTMRHLA
NLDIISQD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttgcactgctgaacctgcaggagccatcaaggccattgacaagcaatca
gtgcatcagatctgctcaggacaggtggtgctgactttggccactgctgtcaaagagctg
gtggagaacagcatcgatgcaggggccaccaacgttgatgtcaggctgaaggagtgtgga
gctgaactagtggaagtgtcagacaatggcaaaggagtagaagaggcaaactttgaggga
ttgacattgaagcatcacacgtctaagctgagggacttctccgatctcatccatgtggaa
acatttggcttcagaggtgaagccctcagctctttatgtgctctgagtggcctgagtgtg
gtgacatgccatgagtccagccaggtgggcaccaagctggtgtttgatctcaaaggccac
ctggtgcagcaatcccctcatccccggcagcatggcaccaccgtcagtctgcagcagctc
ttctacaccctgcctgttcggtacaaggagttccagcgcaatattaagaaggagtatgcc
aagatgatacatgtcctacagtcctactgtatcatctctacaggagtgcggatcacctgc
tccaaccaaaatgggcaggggaagcgtagcacggtgctcagcaccactggcagccagagt
atgagggacaacataggggccatatttggaccaaaacagctgcagagtcttctacctttt
cagcaagtgtctcctgcagaaaatatcattgaggaatatggactgacagaggcagatcta
cccaaacagctttttaccatgtcaggctttgtgtcccgagcggaccatggagttgggagg
agttcgacagacaggcagttctttttcatcaacaaccggccgtgtgatcctgttaaggtg
accaaacttgtgaatgaagtgtatcacatgtacaacagacatcaatatccctttgttgcc
ttgaacatagctgtagcctcagagtgtgtggatgtgaacgtaaccccagacaaacgacag
attttccttcaggaggagaaactcctgctggctattctcaagacctctctcatcaacatg
tatgagtccggagtcaataagatcagcctgaactacacactgaaaagcatgaatacaaag
tctgcgtctgaaatctgtcaggttttcccatctaatgagaacacgccagagcctgcagaa
gagaaggaacatgtgactcgatgcccaaagtcgtctgtaaactttgccggtctaaaagct
gctttttcaagtaatcacacatcaagtcatgggaacaagacaagtgtggccaaagctgcc
aacagtggcccgacacaaaaaaccctgcagacttttttcaaggacacagtcagacctcct
acctgcaactcgaaagcatctcctttgaaagccactagagatttagctgaattctccccg
gtgggaaagtcagtgctagatgggttcaggtacggaaaaatgtcatgcagtgatgcagac
tctgaaaaagacagcactgtcactgtgccatcagcagatattcaggtttctggactggag
atcagaacttctgagccagacactgactgtgttaaacacgaagaagagtcagatgatatt
gacactgttcctgagcacctaaagactgagcctcacacttccaatgaggactgtcctgtt
agcccagatgctaagagagccaggaaagagaaaccagattcccaaatagaagacaaatcc
aacactttttcagaatcggcctctacggtggatgctccaatgtctctaccgaagagggca
gtgccctccagcttctctttacaagatctgtcggggagggtgaagaggttacaggacctg
cagagacagagggacagtgacgagctgcgctatcgacgcttcagggccaagatcaacccc
ggagaaaacaacagtgcagaggaagagctgaagaaagagatcagtaaagacatgtttaaa
gagatggagatcatcggtcagtttaacctgggcttcattatcgccaaactgaactctgac
atcttcatgatcgaccagcacgccacagatgagaaatacaactttgagatgctgcagcag
cacactgtgctccagggacagaaactcatagtccctcagaagcttcacctcactgctgtc
agtgaaaatgtgctcatggaaaacattgagattttcaggaagaatggctttgagtttctt
attgatgaggacggtcaggtgatggagagggtaaagctggtatctctgcccaccagtaaa
aactggacctttggccctggcgacatagaagagctgatcttcatgttgagtgacagcccg
ggggtcatgtgtcgaccgtcccgcgtcaggcagatgtttgcctcccgagcttgtcggaaa
tctgtgatgatcggcactgctctgagcgtcactgagatgaagaagctcctggttcatatg
ggggagatcgagcaaccctggaactgtcctcacggcaggcccaccatgagacacctcgcc
aacctggacatcatctcacaagactga
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