Eleginops maclovinus (Patagonian blennie): 134870874
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Entry
134870874 CDS
T09869
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134870874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134870874
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134870874
Spliceosome [BR:
emac03041
]
Complex C
Other components
Step II factors
134870874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
T2SSE
AAA_16
Flavi_DEAD
PhoH
TsaE
ABC_tran
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
134870874
NCBI-ProteinID:
XP_063749441
LinkDB
All DBs
Position
10:complement(14704756..14714759)
Genome browser
AA seq
1226 aa
AA seq
DB search
MADGGVDELSQLEYLSLVSKVCTELDNHLGISDKDLAEFVIDLAEKQPTFDGFKALLLQN
GAEFTDSLIGNLLRLIQTMRPPSKASMSKATETLVKPKTEKEKLKELFPALCRADEPVPK
KLLDEDDVKVAADAMKALEMFMPSVSGSDTKSSKSRSEKSRRQSRSRSKSRERDRHRDRD
RDRDRDRDRDRDRDRDRKRRHRSRSRSRSRDRERHRDGDRDRDRDRGKRREKSIRLTERS
YSPEKDQDKDSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLV
HISELRREGRVANVADVVSKGQRVKIKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVG
PDGGEEITMRNPDRPSNLNLGHVPEMEQDDTLERKRLTKISDPEKWEIKQMIAANVLSKE
EFPDFDDETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQ
AAMMQSALAKERRELKQAAREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPND
IPEWKKHAFGGNKASYGKKTAMSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGK
TTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSP
ETVIKYMTDGMLLRECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVMKRTDMKLI
VTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPG
DVLVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK
VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT
GPGKTYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETL
ITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSV
QNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR
AQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVY
IHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQKK
QQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtggagttgacgagctttcgcagcttgaatatttgtctttggtgtccaag
gtctgcacggagcttgacaaccatctgggaataagtgacaaagatttagctgaatttgtc
atcgaccttgctgaaaaacagccgacgttcgatggctttaaagctcttttgctccaaaat
ggagccgaattcacagattctctcatcggtaatttgctccggctcatccagacaatgcgt
cctccatccaaagcatctatgagtaaagccactgaaactttagtcaagccgaagacggaa
aaggaaaagctgaaggagctgtttcctgcattgtgtagagctgatgaaccagtgccaaag
aagctactagatgaagatgatgtgaaagtagctgctgatgccatgaaagcgctggagatg
tttatgcccagtgtcagtggatcagacaccaaaagcagcaagagcaggtcagaaaagagc
agacgccaaagccgaagtcgcagcaaaagcagagagcgggacagacacagagatagagac
cgtgatcgcgacagggatcgcgacagggatcgggacagggatcgggacaggaagagacgg
catcgctcaaggtccaggtctcgctccagggatcgtgaacgccatagagatggagacaga
gatagagacagagatcgcggaaaaagaagagaaaaatctatccgcttgactgagcgctcg
tatagtcccgaaaaagaccaagacaaagactctgaccgctggaaagacaaacacgtggac
cgcccaccacctgaggagccttctgtcggtgacatatacaatggcaaagtcaccagtatc
atgcagtttggatgctttgttcagctggagggactaaggaaacgatgggagggtttggtc
catatttccgagctgcgcagagagggccgtgtggccaatgttgctgatgttgtcagcaaa
ggccaaagagtcaagatcaaggtgctctcattcaccggctccaagaccagcctcagtatg
aaggatgtggaccaggagacaggagaagacctgaaccccaaccggaggaggaacgtgggc
cctgacggaggggaggagatcaccatgaggaaccccgatcggccgagcaacctgaacctc
ggccacgtccccgaaatggagcaggacgacaccctggagcgcaagaggctcaccaagatt
tctgacccagagaagtgggagatcaaacagatgatagcagccaacgtgttgtccaaagaa
gagttccctgattttgatgacgagacaggaattcttcctaaagttgatgatgaagaggat
gaagatttggaaattgagctggttgaagaagaacccccattcctgaggggacacaccaaa
cagagcatggacatgagccctgtcaagattgtcaagaatccagatggctctctgtctcaa
gcggccatgatgcagagcgctctggctaaggagaggcgggagctgaagcaggcggcacga
gaggcagagatggactccatccccatggggctgaataaacactgggtggaccctctgcca
gatgttgacggcaggcagattgcagctaacatgagaggcattgggatgatgcctaatgac
atccctgagtggaagaagcatgcttttggaggcaacaaggcctcctatggaaagaagacc
gcgatgtccatcctggagcagagggaaagtctgcccatctacaaactgaaggagcagctc
attcaggctgttcatgacaaccagatcctgattgtgattggagagacggggtccggtaag
acgacgcagatcactcagtacctggcggaggccggctacaccacccgggggaagatcggc
tgtacgcagccccgtcgtgtggccgccatgtccgtggccaagagagtctctgaggagtac
ggttgctgtctaggccaagaggtgggttacaccatccgtttcgaggactgcaccagccca
gagacggtcatcaagtacatgacggacggtatgctgttgagagagtgtctgatcgactct
gaattgggccagtacgccatcattatgttggatgaagctcacgagaggacaatccacact
gatgtgctttttggtttgctcaagaagactgtaatgaaacgcacggacatgaagctgatc
gtcacatcagccacactggacgccgtgaagttctcccagtatttctatgaagcgcccatc
ttcaccatcccaggaagaacttacccagtggaggttctctacacaaaggagcctgagacg
gactacctggatgccagtcttatcacagtcatgcagatccatctgacagaacccccaggg
gacgtcctggtgtttctgacgggacaggaagagattgacaccgcatgtgagatcctgtac
gagagaatgaagtccctgggtcccgatgtccctgaactgatcattctgccagtttactct
gccctgcccagtgagatgcagaccaggatctttgaccccgcaccccccggcagcagaaag
gtggtcattgccacaaacattgcagagacctctctgaccatcgatggaatctactacgtg
gtggaccctggctttgtgaagcagaaagtgtacaactcaaagactggcatcgaccagctg
gtggtgactcccatctcccaggcccaggccaagcagagggcgggtcgagctggcagaacg
ggccccgggaagacttaccggctctacactgagagagcctacagagacgagatgctgacc
accaacgtgcctgagatccagagaaccaacttggccagcactgtgctctctctgaaggcc
atgggcatcaacgacctgctgtcctttgacttcatggacgctccccccatggagactctg
atcacagccatggagcagctgtacactctgggagcgctggatgatgaaggcttactcaca
cggctgggaagaaggatggcggagtttcctctggagcccatgctgtgtaagatgttgatc
atgtccgtccatctgggctgcagtgaagagatgctcaccatcgtctccatgctgtctgta
cagaatgtcttctacaggcctaaggacaagcaagccctggcagaccagaagaaggcaaag
tttcatcagcctgagggagaccacctgaccctgctggctgtctacaactcctggaagaac
aacaagttctccaacccctggtgttatgagaacttcatccaggctcgctccctacgcaga
gcccaggacatccgcaagcagatgctgggtatcatggacagacataaactggacgtggta
tcgtgtggtaaggccacagtacgggtccagaaagccatctgcagtggcttcttcaggaat
gctgccaaaaaggatcctcaggaaggttaccgcacccttatagaccaacaagttgtgtat
atccacccctccagtgctctgttcaaccgccagcctgagtgggttgtgtaccacgagttg
gtgctgaccaccaaggagtacatgcgggaggtgaccaccatcgacccccgctggctggtg
gagttttcgcctgccttcttcaaagtgtccgaccccacgcgcctcagcaagcagaagaaa
caacagcgcctcgagcctctgtacaaccgctacgaggaacccaacgcttggagaatctcc
cgagccttcaggcgccgttaa
DBGET
integrated database retrieval system
