Eleginops maclovinus (Patagonian blennie): 134871305
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Entry
134871305 CDS
T09869
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134871305 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emac03400
]
134871305 (msh2)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
134871305 (msh2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
134871305
NCBI-ProteinID:
XP_063750092
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Position
10:complement(11850150..11860787)
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AA seq
935 aa
AA seq
DB search
MAVQPKHNLSMDSAAESGFLSFIFSMPEKPDTTFRVFDRNDFYTVHGKDAVFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKMNFEAFVRDLLLVRQYRVEVYKNHNKSSKEHDWKLEYKA
SPGNLTQFEEILFGGGTGAVGGAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGNTDNNKLREVVERGGVLVSERKRAEFSSKDTIQDL
NRLLRAKKGESVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTSLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
MVESFVCDSELRQTCQEDLLRRFPDLNRLSKKFHRHSATLQDCYRVYQAVSHLPALVGAL
ERYSGSYEVLLEAVFLSPLRDLHSDFVKYQEMIETTLDMNQIDHHEFLVKASFDPMLSEL
REKMDELEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKGLRNNKKFST
LDVQKNGVRFTNGKLSSLNEEYTKNREEYEEAQDAIVKEIINIASGYVDPLQTLSDVIAQ
LDAVVSFAVASVSAPVPYVRPRLLAEGCRRMELTQARHPCMETDADTAFIPNDITFIQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFA
THFHELTAMAAQQSTVHNLHVTALTTHNTLTMLYRIKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAAELEEFQEPAGEKPELEEEPEAKRRRTDKQEGETLIQKFLENAKSLPAATMSD
EEVKTALRKMKQELLSKNNTYITEILSRYIPAKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacacaacctgtctatggacagtgcagccgaaagtggctttcta
agcttcattttctccatgccggagaaaccggacactactttcagagtgtttgatcgtaac
gacttctacactgtacacggaaaagatgccgtattcgcggcgaaagaagttttcaagacg
aatggggtcatcaaatatttgggctcagggagtcgcaagctggaaagtgtggtcctgagc
aagatgaatttcgaggcctttgtgagagacttgctgctggtgaggcagtacagagtggaa
gtttacaaaaaccacaacaagagcagcaaagagcacgactggaagctcgagtacaaggcc
tctccaggaaacttgactcagtttgaggagattctgttcggtgggggaaccggagcagtg
ggcggtgcaggagttgtagctgtgcgttttgctacaggagctgatggacagcgcgtggtc
ggcgtcggctatgtggacgcggcccagagaacgatgggagtgtgtgagtttcctgacaac
gagatcttctccaacctggagtcccttcttgtgcaaatcagccccaaagagtgtctcttg
gcccagggtgaaggcaacactgacaacaataaactacgggaggtggtagagcgaggcggc
gtgctggtctccgagaggaagagagcagagttcagcagcaaagacacgatccaggatctg
aaccggctgctgagggccaagaaaggagagagcgtggcgagcaacacgctgcctgagctg
gacaaacaggtggccatgtcgtgcttggccgcagtggtgcgtttccttgagctgctctct
gacgagtccaactttaactccttcagtttgacctctctggacctgggtcagtacatgagg
ctggacaacgctgccgtcagggctctcaacctcttccagggatcccctgatgacaccagt
ggagctcattcattggccggtctgttgaacaagtgccgcacgccgcagggtcagcgtctg
gtcaaccagtggatcaaacagccactcatggacaaaaccaaaatagaggagaggctggac
atggtggagagctttgtttgtgactctgagctcagacagacttgccaggaggatttgctg
cggcgttttccggaccttaaccgcctgtccaagaagttccaccgtcactctgccactctt
caggactgctaccgtgtctaccaggctgtgagccacctccctgccctagtcggcgccctg
gagagatactcgggtagctacgaggttctgttggaggcggtgttcctctctcctctcaga
gacctgcactctgactttgttaaataccaggagatgattgaaaccacgctggacatgaac
cagattgaccaccatgagttcttggtgaaggcgtcattcgacccaatgttgagcgagctg
agagaaaagatggacgagctggagaagagcatgcaggcggtgctgaacagtgcagccaga
gaactaggtctggatgctggtaagacggtgaagctggaatctaacgccatgctgggcttc
tacctgagagtcacctgcaaggaggagaagggcctgaggaacaacaagaagttcagcacg
ctggacgttcagaagaacggagtgcgcttcacaaacggaaagctgagctctctgaacgag
gagtacacaaagaaccgggaggagtacgaggaggcccaggacgccattgtcaaagagatc
atcaacatagcctcaggctacgtggatcccctccagacgctgagtgatgtgatagcccag
ctggatgccgtggtgagttttgccgtggcatcagtatccgctcctgtgccgtacgtgcgg
cctcgtctgctggcggaaggctgcaggcgtatggagctgacgcaggccagacatccctgc
atggagactgacgcagacactgccttcatacccaacgatatcaccttcatccagggagag
aagaacttctacataattacaggaccaaatatgggcggcaagtcgacgttcatccgtcag
gtgggagtgatcgctctgatggctcagatcggctgctttgtgccatgtgagaaggcggag
cttagtgtgattgacagcgtcctagccagggtgggagcgggagatagccaggtcaaagga
gtgtccacttttatgtccgagatgctggagacggctgccatactgcgctcggccacagag
aactctctcatcataatcgacgagctcggaagaggcacgtccacgtacgacggctttggt
ctggcctgggccataagcgaacacatcgcctctaaaatcagctgcttctgtctgtttgcc
actcacttccacgagctgacggcaatggcagcgcagcagtccaccgtccacaacctgcac
gtcaccgctctgaccacacacaacactctgaccatgctgtacaggatcaaaccaggtgtg
tgtgaccagagtttcggtatccatgttgcggagttggcttgcttcccgccatcggtggtg
gccatggcgaaggaaaaggcggcggagctggaggagttccaagaacctgcaggggagaaa
ccggagctggaggaagagcccgaggccaagagacgacggacggacaaacaagagggggaa
accctgatccagaagtttctggagaatgccaagtctctcccggctgccaccatgagtgac
gaagaggtgaagacagcgctcaggaagatgaagcaggagctcctttccaaaaacaacaca
tacatcacagagatcctgtcacgctacattcctgcaaaaacagcttga
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