Eleginops maclovinus (Patagonian blennie): 134871379
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Entry
134871379 CDS
T09869
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134871379 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134871379 (smarcd2)
03036 Chromosome and associated proteins [BR:
emac03036
]
134871379 (smarcd2)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134871379 (smarcd2)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134871379 (smarcd2)
PBAF complex
134871379 (smarcd2)
GBAF(ncBAF) complex
134871379 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
134871379
NCBI-ProteinID:
XP_063750215
LinkDB
All DBs
Position
10:7571614..7582161
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AA seq
503 aa
AA seq
DB search
MASRGGGGFTPMGLNVNPMNVGHAAGMRMPGMPQPPGGYSRSMNNVPQYPQRQGMPSNRV
GGPMGSMGGQLPGPSYGSGNMSMRQGMGPPGMDASRKRFLHMHQQQQQQEALGGLRRGPK
RRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRI
YISNTYTPSKPEGEEAEKVSSWELRVEGKLLEETGKQKRKFSSFFKSLVIELDKELYGPD
NHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTR
ASIMQALWLYIKNNKLQDCHEKEFINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPII
INHMISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEVKIHETIEYIN
QLKTERDFMLSFSNKPQDFIQDWLKSQCRDLKLMTDVTGNPEEERRTEFYEGPWVPEAVG
RYIYSKVQQRRQDLEQVLGIRLT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagaggaggaggaggattcactccgatgggtctgaatgtgaaccccatgaat
gtggggcatgctgcgggcatgaggatgccaggtatgccccaaccaccggggggatactcc
cggagcatgaacaacgttccccagtacccacagcgccaagggatgccatctaacagagtt
gggggccccatgggatctatggggggtcagctgcctggcccttcttatggcagtgggaac
atgtccatgcggcaaggcatggggcctccaggcatggacgcttcgagaaaacgctttctt
catatgcatcaacaacagcagcagcaagaggcgctgggaggccttagacgagggccaaaa
agacgaaagatggcagacaaggttctcccacagaggatcagagacctggtcccagagtcc
caggcctacatggatctcttggcctttgagaggaaactggaccagaccatcgcccgaaag
cgtatggagatccaggaagccatcaagaagcccattatgcaaaaacgcaagctgaggatc
tacatttctaacacgtacacccccagcaagccggagggcgaggaggcagagaaagtgtcc
tcctgggaactgagagtggagggaaaacttctagaggaaactggcaagcagaagcggaag
ttctcatctttcttcaaaagcctggtgattgagcttgataaggagctctatggacctgac
aatcacctggtagagtggcacagaatgcccaccactcaggaaacggatggcttccaggtc
aaaaggcctggcgatgtgaatgtgaaatgcaccctgctgctcatgctcgaccaccagccc
cctcagtacaaactggacccgcggttggctcgtctgctcggtgttcacacacagacgcgg
gccagcattatgcaggctctttggctctacatcaagaacaacaagctgcaggactgtcat
gagaaggagttcatcaactgcaaccgctacttcagacagatcttcggctgtccccgcatg
aggttctctgagattcccatgaaactggcgggcctgctgcagcaccctgaccccatcatt
atcaatcacatgataagtgtggaccccacggatcagaagaagacagcatgctatgacatt
gatgtggaggtggatgacccactgaagggccaaatgaacagtttcctgtcctctacaacc
aaccaacaggaaattgctgcgctggaggtgaagattcatgaaacgattgagtacatcaac
cagctgaagactgagagggacttcatgctgagcttcagcaataaacctcaggacttcatc
caagactggctcaagtctcagtgcagagatctgaagttgatgactgatgtgacaggaaac
ccagaggaggagaggaggactgagttctacgaggggccctgggtaccagaggctgtggga
agatacatctactccaaggtgcagcagagaagacaagacttggagcaggtgttgggaatc
cgtctcacctaa
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