Eleginops maclovinus (Patagonian blennie): 134872011
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Entry
134872011 CDS
T09869
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134872011 (gemin5)
03041 Spliceosome [BR:
emac03041
]
134872011 (gemin5)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134872011 (gemin5)
mRNA cycle factors
P-body specific factors
134872011 (gemin5)
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
134872011 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_GEMI5
GEMI5_RBS
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
TPR_IF140-IFT172
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
134872011
NCBI-ProteinID:
XP_063751139
LinkDB
All DBs
Position
11:complement(14472937..14488121)
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AA seq
1459 aa
AA seq
DB search
MHERSLPASPNWYCSRSSDVNSSGLLGVGAKNIIYLIDVSASSCRVVGELVGHKDLVSGF
SFCQHAGQSNICVSSSCDGSIRFWDSENKVLIREQAAHQSSVSAVHWSPVDKNLVVSGDE
KGIVVCHWYNTGDTTSFFPEPRTIFCLTCSPHTWSTVAVGYKDGMIVLIDVSKKGEVMHR
LRGHEDEIHSLAWSPVASEDTLYISEATSGTSAGDEKGCFLASGSKDQTMRIWSSAKGKS
VMTLKLPYLKKRGSAVDPGVKERLWLHVHWPKGRPSQLVSSCFGGELVIWDLTRTGKQRW
TLLGTSSEGQNHNRIVFNVSSFHLQDDRELIISTSMDREIKCWDLASLDCCWTLPTLGGF
VYALTFSPVGTGCLALGVGDNMIRVWNTLTTQNQYDTRSFWQGIKSKVTALAWHPKKEGS
LSFGTDDGKVGIYEVFSNRPPQISSSYHRKTVYTLAWGPPVPPMSFGAAGGKPSFSLYSC
AGEGTILQHDPFKLSGEAADIDKLIRDTNHIKHKLSPHTDFSWKPDGKVVAIGNEDGCID
VYEAPSLKLLCSIQQHHKIINTLRWHHDHGSPPELHCLLASGSSNATVYVHDLRSIIENP
PESPVVLTEPYRRLCGHTAKITGMVWSPHHEARLVTVSYDGTAQVWDVLQEAAICNYRGH
VGFLLCVDWSPVDPDVIWTGGKDFTLHEWTVSKQEFTKPPKGKKMVNLKEKKKKNKKVSG
PGGAVPLEMNGGSVTGGVKAAKAQELSGEDEEDEVSSTSISVPPPAIIETQRKPFIAVKS
KDKPDLLKKKKPRSMLPVSTSMDHRPKEDLLKDCITLASVKHSSALPAGCVPGQGEHIHL
GLFSDRQALYRMFEAEEEGHVEAGHFESVVYLRLWSGDLEGALQLATEKGELNDHLLSLA
PMAGFQVWSRTVEAFVKQLCLQEQYLKAASHLLSINKLYEAIDLLRSHKLYREAIALVKA
RLPAEEPVLKELCTSWAAVLEKDGHFSAAAKCYLAAGASFDAAKVIARKNDVSSLSTAAS
LARISGEVALALSLAQRCAKDLAAAQDWIAAQEVLSSQESLLAHRLHLCVAELLAVLLAD
SQAASPPCISTHPWASPGECHISIQERVRAVWEEQFGVSQSSAGHRSVAALLQELKSLES
PTPTANIPLRQVQLYSSLHLTRAVLSWLSDDDGQLIKELWQALAWLRDAGHFCVSAELCR
LLFPDGDVSVCSKKHLHHSEVLHHTEEEAKAAADSLQAFVHYHRLYQHWWSNPTQIQSRY
SLAAAECSPGDEVKDKVVNGDRAVSDSGESVTPETRTFDDLDFDASVLLSEHHAACQASQ
RSVKEIQERIAALVLRHSRGQAGQLDSGETEAADRPLQISSSREDCSGAQGSADAGQRPE
EQETLLSLSTKMSEHQKQLADLPNTTKMYPHPDVVECCLVVLHLSKSSVSVLIQQEAKDL
LRKYGTNPSAHKTAQQFHS
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaaggtcgctccccgcctctcccaactggtactgctcccgcagcagtgacgtc
aacagcagcggtttgctgggcgttggagccaaaaacatcatctatttgattgatgtgtct
gcatcctcctgcagggttgtaggtgagcttgttggccacaaagacttggtgtctggcttt
tcattctgtcagcatgcagggcagagcaacatctgtgtcagctcctcctgtgatgggagc
attcgcttctgggactccgaaaacaaggttcttataagggagcaggcagctcatcagagc
tccgtatcagcggtgcactggtctccggtggataaaaacctggtggtgtcgggggatgag
aagggcatcgtggtgtgtcactggtacaacacaggagacaccaccagcttcttcccagag
cccaggaccatcttctgcctcacctgctcccctcacacctggagcactgtggctgtcggg
tacaaagatgggatgatcgtgctgatagatgtgagtaagaaaggcgaggtgatgcaccgt
ctgcgtggacacgaagatgagattcactcgctggcctggtcgcctgtagccagtgaggac
accctctacatcagtgaagcaaccagtggaacgtctgcaggagatgagaagggctgcttt
ctagcatctgggagcaaagaccagacaatgaggatctggagctcagcgaaggggaaaagt
gtgatgactctgaagctgccatatctgaagaaaagaggctctgcagtcgaccctggggtc
aaggagagactctggctccatgtccactggccgaagggacgaccctcacaactggtgtcc
agctgcttcggtggtgagttggtgatctgggacttgacccggacagggaaacagaggtgg
actctgttagggacatcatcagaggggcagaaccacaacaggatcgtcttcaacgtgagt
tcatttcacctgcaggacgacagagagctgatcatcagcacctccatggacagagagatt
aaatgctgggatcttgcctctctggactgttgttggactctgcccaccctgggagggttt
gtctacgccctgaccttctcccctgtgggaacagggtgtttggcgctgggtgtcggggac
aacatgatccgggtgtggaacacactgaccacccagaaccagtatgacacccggtccttc
tggcagggtatcaagtccaaggtcacagcgctggcatggcacccaaaaaaagaagggtcc
ttgtcttttggaacagacgatggaaaagtgggcatctacgaagtcttttcaaacaggcct
cctcagatatcgagttcctatcacagaaaaacagtgtacacactggcctgggggccccca
gtccccccgatgtcgtttggtgccgcaggaggaaagccgtccttcagcctgtacagctgc
gccggggaaggcaccatcctgcagcacgacccgtttaaactgagtggagaggctgcggac
atcgacaagctgatcagagacaccaaccacatcaagcacaagctgtctccacacacagac
ttcagctggaagccagatgggaaagtggttgccattggcaacgaggacgggtgtattgat
gtgtatgaggctcccagtctgaagcttctgtgcagcatccagcagcaccacaagatcatc
aacacgctacgctggcatcacgaccacggctccccgccggagctgcactgcctcctggcg
tcaggctccagcaatgccactgtctacgtgcacgatctccgctccatcatagagaatcct
ccagaaagccctgttgtgttgacggaaccatatcgcaggctgtgtggtcatacagctaaa
atcaccggcatggtctggagtccacaccacgaagcccggctggtcaccgtctcatatgat
ggaactgcgcaggtgtgggacgtgttgcaggaggccgcaatctgtaactaccgtggccac
gttggtttcctgttgtgtgtggactggtcgcctgtggatccagatgtgatctggactgga
ggaaaggactttacactacatgaatggacagtctccaaacaagagtttacgaagccacct
aaagggaaaaagatggtgaacctgaaagagaagaagaagaagaacaagaaggtgtcaggg
cccggaggagctgtaccactggagatgaacggaggttcagttacaggaggagtgaaggcg
gcgaaagcccaggagctgtctggtgaagatgaggaagatgaagtcagctcaacaagcatt
tctgttcctccaccagccataattgagacgcaaagaaaacccttcattgccgtaaagagc
aaagacaaaccagacttgctgaagaagaagaagcctcgctccatgctgcccgtcagcacc
tccatggatcatcgccccaaagaggatctgctaaaagactgcatcactctggcctctgtc
aaacacagcagtgctctccctgcaggatgtgtcccaggccagggagagcacatccatctg
ggcctcttctctgaccgacaggcgctgtaccgcatgtttgaggcagaagaggagggtcat
gtggaggcgggtcactttgaatcggtggtgtacctgcggctgtggagcggagacctggag
ggggcgctgcagcttgccacagagaaaggagagctgaatgaccacctgctctccctcgct
cccatggcggggttccaggtgtggagccggacagtggaggccttcgtgaagcagctgtgt
ctgcaggagcagtacctgaaggcagcatcccacctgctgtcaatcaacaagctatatgaa
gccatcgacctgctgcgctctcacaagctctacagagaggccatagccctggtcaaagcc
aggctgccagcagaggagccggtcctgaaggagctgtgcacctcctgggctgccgtgctg
gagaaggacggacatttctctgcagctgctaaatgttacctagctgctggtgccagtttc
gacgctgctaaggttatcgctaggaagaacgacgtctcctcgctgagcacagcggcgagt
ctggccagaatctccggagaggtcgctctggctctgtcgctggcgcagcggtgcgctaaa
gacctggcagctgctcaggactggatcgcagcccaggaggtcctgagctcacaggagagc
ctgctggcccacaggctgcatctgtgtgtcgctgagcttctggcggttttgctggcagac
tctcaggcagcgtctccgccctgcatctccactcacccatgggcgtctccaggtgagtgc
cacatcagcatccaggagcgagtgagagccgtgtgggaggagcagtttggcgtttcacaa
tcgtctgcaggacaccgcagcgttgcagctcttctgcaggaactaaagtctttggagagt
cctacacccaccgccaacattcctctcagacaggttcagctgtattcctccctccatctg
acccgtgctgtgttgagctggttatcagacgatgacgggcagctgataaaggagctgtgg
caggcgttggcctggctccgagacgccggacacttctgtgtctctgcagagctctgcagg
ctgctgttccctgacggtgatgtcagtgtttgttccaagaaacaccttcaccacagtgaa
gtacttcaccacacagaggaggaggccaaagctgctgctgacagtcttcaggcattcgtc
cattaccaccgtttgtaccaacactggtggagcaaccccacccagatccagagcagatat
tccctcgcagcagccgaatgcagtccgggagacgaggtgaaggataaagtggtgaacgga
gacagagctgtatcggattcaggggagagtgtcactccggagactaggacgtttgatgac
ctggacttcgatgcgtctgtgcttctgtctgagcatcacgccgcctgtcaggcctcccag
aggtcagtgaaggagatccaggagcggatcgctgccttggtgctgaggcacagccgaggc
caggcagggcagctggactctggggagacggaggccgcagacaggcccctgcagatctcc
tccagcagagaggactgctcaggtgctcagggatctgctgatgctgggcagcggcctgag
gagcaggagactctgctctctctgtctaccaagatgtccgaacaccagaaacagctggct
gacctgccgaacacaacgaagatgtatcctcatccagatgttgttgaatgctgtctggtt
gtcctgcacctcagcaagtcttccgtctcagtgttgatccaacaagaggccaaagatctg
ctcagaaaatacggaacaaatccctccgcccacaaaaccgctcagcagttccattcctga
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integrated database retrieval system
