Eleginops maclovinus (Patagonian blennie): 134872033
Help
Entry
134872033 CDS
T09869
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134872033 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
134872033 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134872033 (thoc2)
03041 Spliceosome [BR:
emac03041
]
134872033 (thoc2)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134872033 (thoc2)
Spliceosome [BR:
emac03041
]
Complex C
Other components
EJC/TREX
134872033 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134872033 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
134872033
NCBI-ProteinID:
XP_063751179
LinkDB
All DBs
Position
11:complement(21943209..21966443)
Genome browser
AA seq
1573 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKDLTEKTDHGREIKSMQAALYELCWQVVQGNLKL
DLVTSVLGEMMELRDDMPSILADVFSILDLETSALEEKIKREHYTSLVGACVFFVPEVIL
KERLDPDTLETLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGSITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDIYVHLMPVDATIVEEHKRDITE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPPFYATSHKAIALALCQLVHLTVDPLYRRAGLPKGARGRVIQPLRNKRAPRPAESFE
DLRRDIFSMMCYLGPHLSHDAILFAKIVRLGKAFMKEYQSENRPDARDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEEVWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLACLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVMSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPATGTSKTDEGMSEDGERGKDKAQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKDKSGKEKKEKKEKTAGGTPETKAESRREKLRDERPGKEERAAREGKEKTPKADRE
KAKAEEKSSKDDKAKAGNGEPVEPSRERDAIKESKSKEKGDRSAVTGSIKSPVPKSESAE
SERDHKRRKLDSHSSPSHSSSVKLICHLHSSPQDNSNEPKDSTSKHHANYNSVTRSKSRE
RETEKKESDSTQGRSKEKKEEKERKERKRDHTVNEQEPSLESKRRKDENGTNSSKNSKSE
SPSCDSPLSAEKEKTKRSKSSSKEKTDSLKPERTSSGGKKESRHDKEKSEKKEKRDSSGK
EEKKHHKSSDKHR
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaagacctaacagagaaaacagatcatggacgtgagattaaa
agcatgcaggccgccttatacgagctctgctggcaggttgtacaggggaacctgaagttg
gatcttgtcaccagtgtccttggggagatgatggaactccgagatgacatgccatcaatt
ttagcagatgtgttcagcatactcgatttagagactagtgcactggaagaaaaaatcaaa
cgtgaacattacacgtcacttgtgggagcatgtgtgttttttgttccggaggtcatcttg
aaagagaggctggatccggacacccttgaaactctgggacttataaagcaggctcatcaa
ttcaaccagaagattgttaaaatcaagactaaacttttttacaagcaacagaagtttaac
ttgctacgggaggagaacgagggctatgctaaactaatcaccgagctcggccaagacctc
tcgggcagcatcactagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgtcctggacataatcctagaggtgtacgagagtcgatctgac
caagatgagttcttcctgtctctcatcaagtcctacatgtgtgagccactcaccctttgc
cacatcctgggcttcaagttcaaattttaccaggagcccaatgaggaaaccccaaagtca
ctttatcacattgctgctgctctgcttcaccataacctgatagagctggaagatatctat
gtacatcttatgccagtagatgccaccatcgtagaagaacacaaacgggatatcactgag
gcaaaacagattgcccgcaagctggtcatggtggtgttgccctcggagaaaagtgaagac
aaagacaaggagaaggaaaaggaggaggagaagaatgacaagcctcctgataaccagaag
cttggtctgcttgaggcgctactcaggattggagactggcaccacgcccagagtattatg
gaccagatgccgcccttctacgctacatctcacaaagccatcgcgctggcactctgccag
cttgtgcacctgactgtggaccctctttacaggagggcgggcctccctaaaggagcaagg
ggccgtgtaattcagccactgaggaacaagcgggcccctcggcctgcagaaagctttgag
gacctgcgcagggacatattcagcatgatgtgctacctgggcccgcacctctcacacgac
gctatcctctttgccaagattgtgcgtctaggcaaggccttcatgaaagagtaccaaagt
gaaaacagacctgatgcccgagacaaaatggaaactctgctgagttgtttcttgagcatt
gcagaccaggtgctactcccttctctctctctgatggagtgtaatgcttgcatgtctgag
gaagtgtggggcctcttcaaactctttccctaccagcacaggtaccggttatatggacag
tggaagaatgagacgtacaccagccatccactgttggtcaaagtcaaagctcagactgtg
gaaagggccaaatacatcatgaagcgtttgaccaaagagaatgtgaaacaatctggaagg
cagattggaaagctgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccaatggtacgacaacctcatcgtaccagtggtggactccttgaaatacctcacatcc
ctgaactacgatgtcttggcctattgcatcatcgaggccctggctaatcccgagaaggag
aagatgaaacatgacgacaccaccatctcctcgtggcttcagagcctggcatgtctgtgt
ggagccgtgttcagaaaatacccgatcgagttggctggccttcttcagtatgtcaccaat
cagctgaaagcagggaagagttttgacctgttgattctgaaagaggttgtgcagaaaatg
gctggcatcgagatcacagacgagatgacctcagagcagttggaggccatgaccggtggg
gagcaactcaaagctgagggtggctactttggtcagatcaggaacactaagaagtcgtcc
cagcgtctgaaggatgcgctgctggaccacgagttagccctgcctctgtgtttactcatg
gcccagcagcgaaatggtgtggttttcttagaggggggagagaaacatcttaaacttgtt
ggccacctctatgaccagtgtcatgacacgttggtgcagtttggtggctttctggcctcc
aacctgagcacagaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgacgctgccttcttcctgtctcgaccaatgtacgcccatcagatt
ctgtccaagtacgacgagctgaagaaagcagagaagggtaaccggcagcagcagaaggtc
cacaaatacgtggcagcgtgtgaacaggtgatgactccggtgcatgaggccgtaatgtca
ctccatccagccagggtctgggatgacctccgccctcagttttacgccaccttctggtct
ctcaccatgtacgacctggccgtgccacactctgcctacgaccgcgaggtcaacaagctc
aaggtccagattaaggccatcgaggaaaaccccgagatacccatgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggagaaactgcaggaggaggagaagaagcagctg
gagcacgtccaaagggttctgcaccgcctcaagctggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccatcacaaagttcctgcagctctgcctgttcccgcgctgc
atcttctcctccatcgacgctgtatactgcgcccgcttcgtggagctggtccaccagcag
aagacccccaacttctgcaccctcctgtgctacgaccgggtgttctccgccatcatttac
actgtggccagctgtacggagaatgagtctcaccgctacggacgcttcctgtgctgcatg
ctggagacggtgacccgttggcacagcgaccgtgctatctatgagaaggagtgtgtaaac
taccctggcttcctgaccatcttcagagctacaggttttgacggcgggaacaaagcagac
caactggattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa
gcctccgttcactgcctggagacgggagactacacccacatccggaacattctcatcgtg
ctcaccaagatcctgccctgctaccccaaagtcctgaacctggggcaagcactggagtgc
cgagtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcgcttgaaaagccagaaggtgcacatggtccctgagaacgagttt
caccacaaggagcagccggcgcgcagtgccacccccgccagtcaacagaacggccccggc
agcacaggcaagcccgccaccgggacgagcaagacagatgaggggatgtcagaggacggt
gaacggggcaaggataaagctcagggcacaacaaagccagtgaataaagccaacagtgca
gcagccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagctgtcaaa
gaacgggacgacaaagacaagagcggcaaggagaaaaaggagaaaaaggaaaagacagca
ggcggcactcctgagacaaaggcggagagccgtcgggagaagctgagagacgagaggcca
gggaaggaggagcgagcggcacgtgagggtaaggaaaagacccccaaggcagacagggag
aaagcaaaggccgaggagaagagcagcaaagatgacaaggccaaagccggcaacggggag
ccagtggagccatccagggagcgcgacgccatcaaggagtccaagagcaaggagaaagga
gacaggagcgctgtgaccgggtccatcaagtcaccggttcccaaatcggagtcagccgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaagctcatctgtcatctccattcatccccacaggacaatagcaacgaacccaag
gactccacatccaagcaccacgccaactacaactcagtaacccggtccaagagcagagag
agggagacggagaagaaagagtcagacagcacacagggccggtccaaagagaagaaggaa
gagaaggagcgcaaagaaaggaaaagagaccatactgtcaatgaacaagagccgagccta
gagtccaaacgcagaaaggacgagaatggaacaaattcctctaaaaacagcaagagtgag
agtccttcctgcgactccccgctttcagctgaaaaagagaagactaaaagatccaaatct
tccagcaaagagaagacggactctttgaaacctgagcggacgtcctccggaggcaaaaag
gagtccaggcacgataaggagaaatctgaaaagaaggagaagagggacagcagcgggaaa
gaagagaaaaagcatcataaatcctctgacaagcacagataa
DBGET
integrated database retrieval system
