Eleginops maclovinus (Patagonian blennie): 134872083
Help
Entry
134872083 CDS
T09869
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134872083 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134872083 (nup98)
03036 Chromosome and associated proteins [BR:
emac03036
]
134872083 (nup98)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134872083 (nup98)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134872083 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
TFIIA
Motif
Other DBs
NCBI-GeneID:
134872083
NCBI-ProteinID:
XP_063751272
LinkDB
All DBs
Position
11:714319..735113
Genome browser
AA seq
1837 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTASTFGQQNTGFGTPGGFGTSAFGAAANTGGLFGPAQAKPGG
LFGANTFSQPPASSTATGFGFGAAAAGATTTTTSLFGNTGTGTTGGLFSQPSNAFGASKP
TSFGKVSLPSCPPGFGTSTSSGGLFGSTNTTSNPFGGSAVSSLFGGAGFTAAQQQPGTTV
KFNPPSGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAAA
TGGLFGAPAAAASSAATGMFGAAAATTNFSFGQNKSTFGATPAAGGFGATAGGLFGAQQA
AQQQQQQQQQQQQQQQQQQQAAAASSLFKPFGATTTTQSSGFSFGNTNTMGQANTSSIGL
FGNTAAPQPSGLFGAAQTSAATGFGAATGLFGQPNTGFGNVGTQQSLFGNKTAGFGTTTT
SAPSFGTGTGLFGNKPALTLGTGTNTATFGFGANPAAGSLFGAKPATGGLGAALGTSFGA
AGGTGQTSLFGNTQGKLGTTLGAMGTFGASAFNSGANSLGFGAPQQPVALTDPSGAAAQH
ALLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKALTTPTHYKLTPRPAT
RVRPKALGSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNLNSSQYSSPLSKDG
NDLASPPEYPHNGHSGHVEDEEEMAGLSSRTDEDPEVTEFYVNPIAKPVPQGRIPPAVLQ
DTISELNMHKAARNGLELSSDDVSASLGEESLQEEQEEEQQEQQPPHPAGIVLNRVGYYT
IPSMEDLAEMVDENGDCVVENFTVGRKGYGSIFFPGEVNVAGLNLDDIVHFRRKEVIVYP
DDKNKPGEGEGLNRKAEVTLDGVWPNDKTSCSQIRSPERLTEMNYEGRLEKASRRQGARF
LEYRTETGSWVFEVAHFSKYGLQDSDEEEEVPLKSDPKKLKTMMTLPPSRLQQLLPPAQP
QTPVVSDLPAGVPELDSDMADITQSFPTESMLAGEEDELPAGKRLEAMLEGSIPAEHDMV
SASSCMASSLGINPHTLQIMKASLFSEDEEDMFQEPSGLMKSSDVSSPRIVLPQSRASVG
GLLQARFTSGLFAQLPDSPRPSPLSRGSPAAAEPNRSLHWAGPVPSSFLLPTRTPEPSVR
TVGVRRLGGPVPLKESITQGKGSLLMDAGLFRGRSFRVGWGPGWTLVHCGERLSSEDKNP
HLTKTDFSFLPAARSRPLMESCYKVVVEQLEVKASEDQEEELQRPLEICLENSTVETPAA
SSCPLVTPRPGVEALHQYADWIRELSQKGGAEPLLSPWSEVWTLCEALWGRLGPEDPEQE
ALSEYEHQLQRRNTVSSWLSRGASSRVEEEVALAGKNRHTDAIFSFLTGNRISEACRLAQ
SQGDHRLSLLLSQAGGSQDCRDLLALQLNDWSRMQSDSYVPEERLRIYTLLSGRPVWQSS
DSSVNVFSELDWKRCVGVSLWFMLPPTASVADALARYESAFQGSCEGGKYAVAPLPPYLE
EELPNLEEEEETKRPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWQRLDYRLSWHLWGVL
QALHYTHLSPPRQGLLHSSYAAQLESAGLWHMAVFILLHIQDHTQRERAVKELLALYCPL
QETEESQRRECFLTERLLLPETWIHQAKATRARRHADHQQEALHLYRAGAWSQCHRLLIQ
HLASDCIINDNHDYLLEFLEGLAVPERSATIQDWDTAGGVYLDYIRVIKTLQQIQQLESA
GYELERLHSDVTSLCGRIELLPCICARDRLAQSEMAKRVANILRVVLSLQHGASDPLSIP
LARLAPHIARLPMPEDYTLEELRGLTQAYLQQLVLSQ
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcttttggtactccctttgggggagggacggggggcttcggcactgcc
tcgaccttcggacagcaaaacacgggttttgggacgccgggaggctttgggacgtctgcg
ttcggtgccgccgccaacactggaggactgttcggtcccgctcaggctaaacctggcggt
ctgttcggtgccaacaccttcagccagccgccggcctcctccacagccaccggctttggg
tttggagcagcggccgccggcgccaccaccaccaccaccagccttttcgggaacaccggg
acgggaaccaccggaggactcttctcccagccgagcaatgccttcggggccagcaaaccc
acctcgttcggaaaagtctccctcccatcgtgtcctccaggcttcgggaccagcaccagc
agcggggggctgttcgggtccaccaacaccacctccaaccccttcggagggagcgccgtg
tcctcccttttcgggggggcgggcttcaccgccgcacagcagcagccgggaaccaccgtc
aaattcaaccctccgtcaggaactgacacgatggtgaaggccggtgtgaccacgagcatc
aacaccaagcaccagtgcatcacggccatgaaggagtatgagaacaaatccctggaggag
ctgcgtctggaggactaccaggcgggccgaaagggtcccaccaacccgatggccgcggcg
acgggtggtctgttcggggcgccagccgccgccgcatccagcgccgccaccggcatgttc
ggagccgccgccgccaccaccaacttctccttcggtcagaacaagagcaccttcggagcc
acgccggctgccggggggttcggagcgacggctggtggtctgttcggggcgcagcaggcg
gctcagcagcagcagcagcaacaacaacaacaacagcagcagcagcagcagcagcagcag
gcagcggcggccagcagcctcttcaaaccattcggagccaccaccaccacgcagagctcc
ggattctccttcgggaacaccaacaccatgggccaggctaacaccagcagcattggtctt
ttcgggaacacggcggcccctcagcctagcggtctgtttggcgccgctcaaaccagcgcg
gccaccggcttcggggcggccaccggactcttcggacaacccaacaccgggttcggaaac
gtcggcacacagcagagtttattcgggaataagacggctgggttcggcaccaccaccacc
agcgctccgtccttcggcaccggcaccgggctgttcggaaacaagccggccctcaccctg
ggaacagggaccaacacagccaccttcgggttcggagccaaccctgctgcagggagtctg
ttcggtgccaaaccggccaccggaggactgggggccgcactgggaaccagctttggagca
gcaggtggcacaggacagacgtctctgtttgggaacactcagggtaaactgggcaccaca
ctgggagcgatgggaacgttcggagcatcggcgttcaacagcggcgcgaacagcctgggc
ttcggagcgccgcagcagcccgtcgcgctaacggacccgagtggcgcggcggcccagcat
gctttgctgcagcagcagctcagtgttctggcctactctccgtacggagactcacctctg
ttcaggaacccgctgtcggaccccaagaagaaggaagagcgtctgaaacccaccaatccc
acggcccagaaggctctgaccacgcccacccactacaagctgaccccccggccggcaacc
cgggtccggcccaaagcgctgggctcctcgggggcctccaagtctcagctgtttgacggg
ctggacgacgacgagccgtcgctcaccaacggggccttcgtccccaggaagagcatcaag
aagctggtcctgaagaacctaaacagcagccagtatagcagcccgctgagcaaggacggc
aacgacctggcctcccccccggagtaccctcacaacgggcacagcggtcatgtggaggat
gaggaggagatggcgggtctcagcagccggacagatgaggacccagaggtgaccgagttc
tacgtcaacccgatcgccaagcccgtcccccagggccgcatcccccccgccgtcctgcag
gacaccatcagcgagctcaacatgcacaaagcagcgcgcaacggcctggagctgagcagc
gatgatgtctcagcgtctctgggtgaggagtctctgcaggaggagcaagaggaggagcag
caggagcagcagcctcctcaccctgcaggcatcgttctgaaccgcgtgggctactacacc
atcccctccatggaggacctggctgagatggtggatgagaacggagactgcgtggtggag
aacttcaccgtgggcaggaaaggctacggctccatcttcttccccggtgaggtgaacgtg
gcggggctgaacctggatgacatcgtgcacttcagacgcaaagaggtcatcgtttacccc
gacgacaagaacaagccgggggagggggaggggcttaacaggaaggcagaggtgactctg
gatggcgtctggcccaatgacaagacgtcgtgctctcagatccgcagtccggagcgtctg
acggaaatgaactacgagggccggttggagaaggcctcccgcagacagggggcccggttc
ctggagtacagaaccgagaccggctcctgggtgttcgaggtcgcccacttctcaaagtac
ggcctgcaggactctgacgaagaggaggaggtcccgctcaaatctgaccccaagaagctg
aagacgatgatgacacttcctccctcccggctgcagcagctgctcccccccgcccagccg
cagacccccgtggtgtcggacctcccggccggcgtcccggagctagacagcgacatggcc
gacatcacgcagagcttccccacagagagcatgctagcaggagaggaggacgagctgccg
gcggggaagcggctggaggcgatgctggagggttcgatccccgccgagcacgacatggtg
tctgcctccagctgcatggcgtcctcgctgggcatcaacccgcacaccctgcagatcatg
aaggcgtctctgttcagcgaggatgaggaggacatgttccaggagccgtcggggctgatg
aagagctctgacgtctcgtcccctcgcatcgtgctgcctcagagcagagcgtcagtgggg
ggtctcctccaggctcgcttcacctctggcctcttcgcccagctccctgactccccccgc
ccatctcctctgtcccgggggtctcctgcagccgcagagcccaaccgctcgctgcattgg
gccggaccggtcccctccagcttcctgctgcccacacgcacccccgagccctccgtcagg
acggtgggggtccggaggctcggcggccccgtccctctcaaagagtcgatcactcagggg
aaggggtctctgctgatggacgccgggctcttcaggggccgctccttcagggtgggctgg
ggccccggctggactctggttcactgtggggagcggctcagctctgaggacaaaaacccc
cacctcactaagaccgacttcagcttcctgccagcagccaggagccgaccgctgatggag
agctgctataaggtggtggtggagcagctggaggtgaaggccagcgaggaccaggaggag
gagctgcagcgccccctagagatctgtctggagaacagcaccgtggagacccccgccgcc
tcctcctgccccctggtgaccccccggcccggggtggaggcgctgcaccagtacgcagac
tggatcagagagctgagccagaaggggggtgcagagccgctgctgagtccctggtctgag
gtgtggaccctctgcgaggccctgtggggccggctgggccccgaggacccggagcaggag
gccctcagcgagtacgagcatcagctgcagaggaggaacaccgtctcctcctggctgtcc
cgaggagcctcctcccgggtggaggaggaggtggcgctggccgggaagaaccgccacact
gacgccatcttcagcttcctgaccgggaacaggatcagtgaggcctgccgcctcgcccag
agccaaggagaccaccggctctccctgctgctctcccaggcgggggggtctcaggactgc
agggacctgctggctctgcagctcaacgactggagccgcatgcagtcagacagctacgtc
cctgaggagagactgaggatctacaccctgctgagcgggagaccggtgtggcagtcatct
gactcctcggtgaacgtgttttcagagctggactggaagcgctgtgtgggggtctccctc
tggttcatgctccccccaaccgcctccgtggccgacgccctggccagatacgagtccgcc
ttccagggctcctgtgaggggggcaagtacgccgtggccccccttcccccctacctggag
gaagagcttcccaacctggaggaggaggaggaaaccaaacgccctctgcacgacctctgc
ttccacttgctgaagctctacagcgacagacactacagcctgcagcagctgctggacccg
ctgaccgtcacctggcagcgtctggattaccggctcagctggcacctgtggggggtcctg
caggcactgcactacacccacctgagccccccccggcagggcctcctgcacagcagctac
gccgcccagctggagagcgccggcctctggcacatggccgtcttcatcctgctgcacatc
caggaccacacgcagcgtgagcgtgctgtgaaggagctgttggctctctactgccccctg
caggagacggaggagtctcagcggagggagtgcttcctcaccgagaggctgctactcccc
gagacctggatccaccaggccaaggccacccgggcccgccgccacgcagaccaccagcag
gaggcgctgcacctgtatcgggccggtgcctggagccagtgtcaccggctgctcatccag
cacctggcctcagactgcatcatcaacgataaccacgactacctgctggagttcctggag
gggctggcggtccctgaacgcagcgccaccatccaggactgggacacggcggggggggtt
tacctggactacatccgggttatcaagactctgcagcagatccagcagctggagagcgca
gggtatgagttggagcgacttcactctgacgtgacgtctctctgcggccgcatcgagcta
ctgccctgcatctgcgccagagaccgcctcgcccaatcagagatggcgaagcgcgtggcg
aacatcctgcgcgtggtgctgagtctgcagcacggtgcctccgacccgctcagcatcccg
ctggctcgcctggcgccgcacatcgcccggctgcccatgcccgaggactacaccctggag
gagctgaggggcctgacacaggcctacctgcagcagctggtgctcagccaatga
DBGET
integrated database retrieval system
