Eleginops maclovinus (Patagonian blennie): 134872161
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Entry
134872161 CDS
T09869
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
emac04514
Cell adhesion molecule (CAM) interaction
emac04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
134872161 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134872161 (ncam1a)
04517 IgSF CAM signaling
134872161 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134872161 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emac04515
]
134872161 (ncam1a)
04090 CD molecules [BR:
emac04090
]
134872161 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134872161 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
emac00537
]
134872161 (ncam1a)
04091 Lectins [BR:
emac04091
]
134872161 (ncam1a)
Membrane trafficking [BR:
emac04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
134872161 (ncam1a)
Cell adhesion molecules [BR:
emac04515
]
Immunoglobulin superfamily
NCAM1/2
134872161 (ncam1a)
CD molecules [BR:
emac04090
]
Proteins
134872161 (ncam1a)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134872161 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
emac00537
]
Others
134872161 (ncam1a)
Lectins [BR:
emac04091
]
I-type lectins (Siglecs)
134872161 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
Ig_PDGFR_d4
Pur_ac_phosph_N
C2-set_2
fn3_2
Motif
Other DBs
NCBI-GeneID:
134872161
NCBI-ProteinID:
XP_063751390
LinkDB
All DBs
Position
11:2166931..2401766
Genome browser
AA seq
978 aa
AA seq
DB search
MLQIRDLVWGLLLIGCAAAIQVQITPTQGEISVGESKFFLCEVTGDAKDIDWYAPSGEKI
LPNRPDIIVSRGDETMSTLTIYHANVDSAGIYKCVAKNGDKEAQATVQVKIFQKITFESA
PSPQEFNEGDDAAIVCNVVSSPPPTIIWKHKGSKIQAAKDVRFKILDKGHLQIRGIKKID
EGMYNCEARVMARGEIDFRMIKVVVNVLPTIRARVSDVNATADIGASALLACDADGFPEP
TVTWAHNNIVLENGDKYSLGEDGSELEIKDVKKVDEGDYTCIAKNKAGEKAEEVSLNVFV
QPKITYLNNKTASEFDEQVILTCEASGDPTPTISWSFENRVFTEGEQASWTRPDKYESLD
RNIVVRSHARVSSLTLKNVLFTYAGQYLCSASNSIGQDEQLMFLEVRYAPKILGLVTVYT
WEGNAANISCEVEAHPGAAVLWFRDGLQLPSANTTNVKIYNTPSVSYLEITPDSQNDFGS
YNCTASNVMGSESKEFLLIQAEVPSSPEIQQVDPFSSTAVVSFEEPDSMGGVPIIKYRVE
WRLPGQEWKSVEHDAKDDLISITITGLKPETAYKVRMSAINGKGEGESSAVSSFTTEPVR
EPSAPKLEVKVQERGNSLKVNWIKQDDGGSPIKHYLVRYKAKHVSEWKPEIRIPQNSEYV
TLSGLDWNTEYEVYVVAENQQGKSDPGIVSFRTASDPTTIPDAASGGSGLGTGAIVGILI
VVFFLLLVGVDVTCYFLNKCGLLMCIAVNFCGKAGPGAKNKDIEEGKAAFTKDESKEPIV
EVRTEEENTPSQGGGPTEPNETTPLTDPEPAAADSTSPVVNVLPSTANNSVAESFSTAQS
SPVSESTTLTISTCSPTKAPPQNSPTAQSSSSNANPQPDVGPLVDLSETPKAPPTSDPTE
ANANSSQSAPSTDLQVDGPTKDAPNAPCTDSTTPAQNDGKTVKEEKTKVGETEVKNATAE
VKTVPSEAPQTNGNESKA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaataagggacctcgtatggggattgctattgattggctgtgcagccgccatc
caggtgcagatcacgccaacacagggagagatcagcgtgggagagtccaagttcttcctc
tgcgaagtgacgggagatgctaaagacatcgactggtacgcccccagcggggagaagatc
cttcccaacaggccggacatcatcgtcagccgcggagatgaaaccatgtccaccctcacc
atctaccacgccaacgtggacagcgccggcatctacaagtgtgtcgccaagaacggagac
aaggaggcgcaggccacggtgcaagtgaagatcttccaaaagatcaccttcgagagcgct
cccagccctcaggagttcaatgaaggcgatgacgccgccattgtctgcaacgtggtcagc
tctcctccccccaccatcatctggaaacataaaggctccaagatccaggctgccaaagac
gtgcgattcaagatcctggataagggccacctgcagatccgcggcatcaagaagatcgac
gagggcatgtacaactgcgaggcgcgagtcatggcccgcggagagatcgacttcaggatg
atcaaggtcgtcgttaacgtgctccccaccatccgggccagggtctccgatgtgaacgcc
accgcggatatcggggcctcggctctgctggcctgcgacgccgatggcttccccgaaccc
accgtcacctgggcacataacaacatcgtccttgaaaacggcgataagtacagcctgggt
gaggatggttctgaattggaaataaaagatgtcaagaaagtggatgaaggagattacact
tgcatcgccaagaacaaggcgggagagaaagccgaggaagtgagcctgaacgtgttcgtg
caacccaagatcacctacctgaacaacaagacggcctcagagtttgatgagcaggtgatc
ctgacctgcgaggcctcaggagaccccacccccaccatctcctggagcttcgagaaccgg
gtgttcactgaaggagagcaggcttcttggacgcgaccagacaaatatgagagcctcgac
agaaacattgtggtccgcagccacgctcgggtgtcctcgctcaccctgaagaacgtcctg
ttcacgtacgccgggcagtacctctgcagcgccagcaactccatcggacaggacgagcag
ctcatgttcctggaagtccgctatgctccgaagatcctgggcttggtgacggtgtacacg
tgggaggggaacgccgccaacatcagctgcgaggtggaggctcaccccggagccgccgtg
ctgtggttcagagacggcctgcagctgccctccgccaacaccaccaacgtgaagatctac
aacaccccctccgtcagctacctggagatcactcctgattcccagaacgactttgggagc
tacaactgcaccgcctccaacgtgatgggctccgagtctaaggagttccttctgatccaa
gcagaggtgccgtcatcaccagaaatccaacaggtggatcctttctccagcaccgcggtt
gtgagcttcgaggagcccgactccatggggggggttcccatcatcaagtacagggtggag
tggcgtctgcccggccaggagtggaagagcgtggagcacgacgctaaggacgacctgatc
agcatcaccatcactggcctgaagccggagaccgcctacaaggtcaggatgtccgccatc
aacggcaaaggcgagggcgagagcagcgcggtgagcagcttcaccaccgagcccgtccgg
gaacccagtgcacctaaactggaggtgaaggtccaggagaggggcaactctctgaaggtg
aactggatcaagcaggacgacggcggctcccccattaaacactacctggtccgatacaag
gctaaacacgtgtctgagtggaagccagagatccgtatccctcagaacagcgagtacgtg
acgctgagcggcctggactggaacacggagtacgaggtgtacgtggtcgccgagaaccag
cagggcaagtcggaccccggcatcgtgtccttcagaacagccagcgaccccaccaccatc
ccagatgcggcgagcggaggttcaggtctgggcaccggcgccatcgttggcatcctcatc
gtggtcttcttcctgctgctggtgggcgtcgacgtcacctgctacttcctgaacaaatgc
ggcctgctcatgtgcatcgccgtcaacttctgcgggaaggccgggccgggggccaagaac
aaggacatcgaggagggcaaggctgcgttcacgaaagatgagtctaaggagcccatcgtg
gaggtgagaacggaggaggaaaacactccgagccagggcgggggtcccactgagcccaac
gagaccacgcccctcacagatcctgagcctgccgctgcagactccacctccccggtggtg
aacgtgctcccctccaccgccaataactcagttgctgagagctttagcacggcgcagagc
agtccagttagcgagagcaccacgctaaccatcagcacctgcagccccaccaaagccccc
ccccaaaacagccccactgcccaatccagttcttctaacgctaacccccagcctgatgtt
gggcccctggtcgacctgagtgaaacccctaaagccccccccacgtccgacccaacagag
gctaatgccaacagttcacagagcgccccgagtacggacttacaggtagacggcccgacc
aaggatgcgcccaatgccccgtgcacagactcgactacaccggcccaaaatgacggtaag
actgtgaaggaggaaaagactaaagtcggcgagacggaggtgaagaacgccacggccgag
gtgaagacggtccccagcgaggctccgcagacgaacggcaacgaaagtaaagcgtaa
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