Eleginops maclovinus (Patagonian blennie): 134872407
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Entry
134872407 CDS
T09869
Symbol
pafah1b1b
Name
(RefSeq) lissencephaly-1 homolog B
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac00565
Ether lipid metabolism
emac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
134872407 (pafah1b1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emac03036
]
134872407 (pafah1b1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134872407 (pafah1b1b)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134872407 (pafah1b1b)
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134872407 (pafah1b1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
LisH
WD40_RFWD3
LisH_PAC1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Pox_A_type_inc
Beta-prop_NUP159_NUP214
ARMC9_LisH
LisH_WDR26
DUF2570
SutA-RBD
LisH_2
Motif
Other DBs
NCBI-GeneID:
134872407
NCBI-ProteinID:
XP_063751754
LinkDB
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Position
11:complement(10167102..10179074)
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AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAEIDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQMGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGILFHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaaagagatgagctaaatcgagctatagccgactatctccgt
tccaatggatatgaggaggcctattccaccttcaagaaagaggcagagatagatatgaat
gaagaggtagataaaaagtatgcagggcttttggaaaagaaatggacttcagtcatcaga
ttacagaagaaggtgatggagttggagtcgaagttaaatgaggcaaaggaggagatgaca
catggaggacctgtgggtcagaagagagaccccaaggagtggataccccgtcccccagaa
agatacgccctgagcgggcaccgagccccggtcacacgggtcatattccacccggtcttc
tccgtcatggtcacagcctctgaggatgcaaccatcaaggtgtgggactatgaggcgggg
gactttgagcggaccctgaagggacacacagactctgtgcaggacatctcctttgaccag
atgggaaagctgctggcttcatgttcagctgacatgagcatcaaactttgggactttcag
ggcttcgagtgcatccgaacaatgcatggccacgatcacaatgtgtcgtctgtagccatc
atgccaaatggtgaccacatagtgtctgcctccagagacaagaccatgaagatgtgggaa
gtagccactgggtactgtgtgaagacattcacaggccacagggagtgggtgaggatggtg
cgtcccaatcaggacggctcattgatcgccagctgctccaacgaccagacggtgcgtgtc
tgggtggtcgcttcgaaggagtgcaaagctgagttgcgggagcatgagcatgtggtggag
tgcatcgcctgggcccctgacagcgctcaccccactatcctggaggccacgggctcagag
agcaaaaagagcgggaaacctggacccttccttctctccggatcaagagacaaaacaatt
aagatgtgggacgtcagcatcggcatctgcctcatgactctggtgggacatgacaactgg
gtgcgtgggatattgtttcatcctggaggaagattcatcgtaagctgcgctgatgacaaa
accctgaggatctgggactacaagaacaagcgctgcatgaagaccctgagtgcccacgaa
cactttgttacctctctggatttccacaagactgctccttacgtggtgacgggcagcgtt
gatcagacagtcaaagtgtgggagtgccgctga
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