Eleginops maclovinus (Patagonian blennie): 134872649
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Entry
134872649 CDS
T09869
Name
(RefSeq) roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134872649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emac04515
]
134872649
Cell adhesion molecules [BR:
emac04515
]
Immunoglobulin superfamily
ROBO family
134872649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
VEGFR1-3_N_Ig-like
Unc5_NetrinR_N
Ig_PDGFR_d4
PKD
Izumo-Ig
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
134872649
NCBI-ProteinID:
XP_063752103
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All DBs
Position
11:17679713..17775172
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AA seq
1551 aa
AA seq
DB search
MMPACLTGIYCLLAFLHICSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTP
TVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAI
SHNASLEVAILRDDFRQNPVDVMVAVGEPAVLECQPPRGHPEPTISWRKDGSNLDDRDER
ITIRSGKLMITNTRKTDAGKYICVGTNMVGERESEIAELTVLERPTFVKRPSSVVVLAEE
SVEFHCVVQGDPVPTVRWRKDDSDLPKGRFEILEDHTLIVRQVTYSDEGSYTCVVENMVG
KSESSATLTVHVKTVPPAFAIHPRNQVVAVGRTVTFHCEATGNPQPAIFWQREGSESLLF
SNHPPQPYSRLSVSQMGSLTITDVQRSDGGFYSCQALNIAGSVIIKALLEVTDSGSDHPP
PVIRQGPLNQTIAVDSTVLLGCQTSDSPPPTVHWKKDGLVMSPTDSRMSITDTGSLEIRY
AKLGDTGLYTCVASSPNGEASWTAYLQVEEFGVFVQSSEPFDPTMIPSAPSKPEVTDISR
TSVTVSWKSDTNNGETPTSYLIEAFSYMSGSRWVTLAEHINTQTFVLRNLKPATVYLFMV
RAVNAYGLSDPSPISDSIRTQDSTATMQGVDHRHIQRELGDVVIHLHTPSVLSSSAVRVQ
WKVEQQSPYIQGYKVLYRASAEHGQPEGQWSVLEVHAPREEGVVLGQLKRGSIYEFKVRP
FFDEFQGADSEVKVVRTLEEAPSRAPQGVTVTKTDANGSAILVAWKPPTERDDAGVIQEY
KIWCLGNESRYHVNQSVDGSTFSVLISTLTPGIRYSVEVAASNGAGPGVKSDVTFFQLDS
AGQMMDISEDRDTLSQISDVVRQPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYT
GIRKVPSFTFTPTVAYQRGESACGAGRPGLLSMGEPLNQLWLPDNWPNACANHKDCSINC
CNNGNGTSDSNMTTYSRPADCIANYGSHPENKQLGSETAIYSDVKLSNKLNDIKTFNNSN
LCYASPGGDPSATYEPIPYATTQLIQASIKSKAAAGAALAEPMDMHCWKQPPNPPPIPKE
MMAQMQYNIIEQNLLNKDHPQGSEGMIHPKTIPYNQSRDHSTGGSHHSSDRGSNSTAGSQ
NQKKGTRAPKVQKHNAVSWGEAPPPPHANAWVCDKYSLPMERSFDPDGRIEGCPTPPVRG
AASSPPDVSYSHPPNTAPQGDLNNGLHNGAQHLSQHISSHARTLSPTHTYSSIPFCMDTD
GQEEEESEEEADEETDAEPAESHCSQHHNRQKHKHQLHQPSPHKLLLHGLEQTPASSTGD
LDRSVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFFTDGDFNQAALSTRDNVGLRMCRY
PEESGQRPQRPSSPMSTDSNMSPAITHKRPRRHKQNQSGQQDYQPKDVFNDDSCTPLSFS
SQMSHGDYKARGATLPRMGSGEGRGRRGSAGTHRVREVTESQDKHKIPPGGKGSSKSRQH
SELGDVLLYSRPAFPSGHAQKETDDTHSSSFMSCGDSRTKHGGQVEEFLKS
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgcgtgtctgacggggatttactgtctattggcatttctacacatttgttca
gggtctcgtcttcgccaggaagacttccctccccgcattgtggagcacccctctgacctc
attgtgtccaaaggggaaccagccactctcaactgtaaggccgagggccgtccaacccca
acggtggaatggtacaaagacggcgagcgcgttgagacggaccgcgacaacccccggtcc
caccgtatgcttctgcccagcggctccctcttcttcctgcgtatcatccacgggcgacgg
agcaagcctgacgatggcagctacgtgtgcgtggcccgaaactatctgggccaggcgatc
agtcacaacgcgtccctggaagtagccattttgcgcgatgacttcagacagaacccggtg
gacgttatggtggcagtcggggagccggccgtgctggagtgtcaacccccccgtgggcac
cctgaacccaccatctcctggaggaaagatggttccaacttagatgacagagatgaacgc
atcacaatccgcagtggcaagctgatgatcaccaacaccaggaagactgatgccgggaag
tacatctgcgttgggaccaacatggtgggagagagggagagtgagatcgctgaactcact
gtgctagagcgcccgaccttcgtgaagcgacccagcagtgtggtggtgttggccgaagag
agcgtggagttccactgtgtggtacaaggagaccctgttcccactgtccgctggagaaaa
gacgactcagacctgcctaagggccgatttgaaatcctagaggaccataccttgattgtt
cgccaagtgacctattcagacgagggctcgtacacatgtgtggtggagaacatggttgga
aagtctgaatcatccgccacgctcactgtgcacgtcaaaaccgtgccaccagcatttgcc
atacaccccaggaaccaggtggttgcagtgggcaggacggtcaccttccattgcgaggcc
actggcaacccacagcccgctatcttctggcagagggaaggcagtgagagtctcctgttc
tccaaccatccgccgcagccctatagccgtctgtctgtctcccagatgggcagtttgacc
atcaccgatgttcagcgctctgatggaggcttctacagctgccaggctctcaacatcgcc
ggcagtgtcattatcaaagcactgctggaggtcacagactctgggtcagaccaccctcct
ccagtgattagacagggcccactcaatcagaccattgctgtggacagcacagtgctcctg
ggctgccaaacatctgactctccacctccgacagtccactggaagaaggatggtttggtg
atgtcgccgacagactcccgcatgtccattacagacacaggatctctagagattcgttac
gctaagcttggagatacaggcttatacacttgtgtagcttctagtcccaacggagaagcc
tcctggacagcgtacctacaggtggaggagtttggagtttttgttcagtccagtgagccg
tttgaccccaccatgattcccagtgctccatccaaacctgaggtgactgacatcagccgc
acttctgtcactgtgtcatggaaatcggacaccaataatggcgaaacccctacatcttac
ctaatcgaggcattcagttatatgtcgggcagcagatgggtgaccctagctgagcatata
aatacacagacctttgtgctgaggaacctgaagcctgcaactgtctacctcttcatggtc
agagcggtgaatgcttatggcctcagtgaccccagcccaatctccgactccatcagaaca
caggacagcacagccaccatgcagggagtggatcaccgtcacatccagagggagctgggt
gacgtggttatccacctgcacacaccctccgtcctctcctcttctgctgtccgggtgcag
tggaaggtcgagcagcagtccccgtacatccagggttacaaggtcctgtacagggcgtcc
gctgagcacgggcagccggaggggcagtggagcgttctggaagtgcacgccccccgggag
gagggggtggtgctcggtcagctgaagagagggtccatctacgagttcaaagtgaggccc
ttcttcgatgagttccagggagctgacagtgaggtgaaagttgtccggacgttggaagaa
gccccgagcagagcaccccagggtgttacagtgacaaagactgatgccaatgggagcgcc
atcctcgttgcttggaaaccgcctacggaacgcgatgatgctggagtcattcaggaatac
aagatctggtgtctcggtaatgagagtcgctatcatgtgaaccagtctgtggacggctcc
accttctcagtgctgatctccactctcacgccgggaatccgctacagcgtagaagtagca
gcaagcaacggtgctggacctggggtcaagagtgatgtcactttttttcaattagactct
gcaggccagatgatggacatcagcgaggatagagacacgttgtctcagatctccgacgtg
gtgaggcagccggcctttatcgcaggcattggcgccacctgctggttggtgctcatgatc
ttcagtgtgtggctctaccgtcaccgcaagaagagaagtggcctcagcagcacatacacc
ggcatccgcaaggtcccgtcgttcacctttacacctacagtggcatatcaaagaggagaa
tcagcgtgcggtgctggcagacctggccttctcagcatgggagaacctctcaaccagctg
tggctgcctgacaattggccaaatgcatgtgccaatcacaaggactgtagcatcaactgc
tgcaataatggcaacggcaccagtgacagcaacatgacaacatacagccgcccagctgac
tgcatagctaactacggaagccatccagaaaacaaacagctcggttctgagacggccatt
tacagcgacgtgaagctctccaacaagctcaacgacattaagacgttcaacaactccaac
ctgtgctacgccagcccgggaggagacccgtcagccacgtacgagcccatcccgtatgcc
accacgcagctcatccaggccagcatcaagagtaaagcagctgccggggctgctctagct
gaacctatggacatgcactgctggaaacagccccccaaccctcctccaataccaaaggag
atgatggcgcagatgcagtacaacataatagagcaaaacctgctaaataaagatcatccg
caaggaagtgaaggaatgatccatcctaagactatcccctacaaccagagccgtgatcac
agcacaggcggctcgcaccacagctccgacagaggcagcaacagcaccgcgggaagtcaa
aatcaaaagaaaggaacgcgggccccaaaggtccagaaacataatgcagtgagctgggga
gaagccccgcctcctcctcatgctaatgcctgggtctgcgacaagtatagcctacccatg
gaaaggagttttgatccagacgggagaattgaaggctgccctactccaccagttagaggg
gcggcctcgtctcctcccgatgtgtcttatagtcacccaccaaacacagcaccacaggga
gacctgaacaacggcctgcacaatggagcccagcaccttagccaacacatcagcagccac
gctcgcactctgtctccgacacacacgtacagctccatccccttctgcatggacaccgat
gggcaggaagaggaagaaagtgaagaggaggcagatgaggagacagacgcagagcctgct
gaaagtcactgcagccaacaccacaaccggcagaagcacaaacaccagctgcaccagccc
tctccacacaagctgctcctccacgggctggagcagaccccagcctccagcacaggggat
ctggacagatcggtcacagggtccatggttaacagctggggctcagcatctgaggacaac
atctcatctggcaggtccagtgttgtcagcacctcggagggatcctttttcacagacgga
gatttcaaccaggcggcgttgtctacgcgggataacgtcggcctgcgcatgtgcagatat
ccagaggagtcaggccaacgcccccagcggcccagcagccccatgtccacagacagcaac
atgagtcctgcaataacacataaaagacccaggagacataaacagaaccagtcaggtcaa
caggactaccaacccaaagatgtcttcaatgatgactcttgcacgcctctgagtttttcc
agccagatgtcccacggcgactataaggcgaggggtgccacgctgccccggatgggctct
ggggagggccggggtcggcgaggcagcgctgggactcacagggtcagggaggttacagag
agccaggataagcacaagattccacccggaggaaaaggaagcagcaaaagccgacagcac
tcagaattaggggatgtcctcctgtatagtcgtcccgctttcccatcaggtcatgctcag
aaggagactgatgatactcattcatccagctttatgtcatgtggagactcaaggaccaaa
cacggaggacaggtggaggagttcctgaaaagctaa
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integrated database retrieval system
