Eleginops maclovinus (Patagonian blennie): 134872903
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Entry
134872903 CDS
T09869
Symbol
msh3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134872903 (msh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emac03400
]
134872903 (msh3)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
134872903 (msh3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Mo-nitro_C
Motif
Other DBs
NCBI-GeneID:
134872903
NCBI-ProteinID:
XP_063752333
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Position
12:complement(12530794..12571194)
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AA seq
1121 aa
AA seq
DB search
MPKSLKKSCTAQTSISRYFGGLSSRTVSQCGINKNPAEQQPSRGKKKRSPDDSFGLPTKR
TKLPVHDLQVEDLNSEPPSFQSNKKTTVISSPEAAGLCSSTLEKLKGFTCSTEATDGASS
KICEGGSSIRPTQDITEQHRNTNKPHQPGEEHEEEEDVEETGGSRLAASKQGFHFSQFAN
SGGGGGGVRFAELTLPSDLSAPSKRSKKVFTPLEQQVIQLKRQHPDALLAVECGYKYRFF
GEDAEIAAKELNIFCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKVGVVKQTETSAIKASG
ANKNALFARRLSALYTKSTLVGEDVNPVCSLRAVEEGVCDEVVSDPPDSFLLCISESWDK
VKKQLTVGLVAVQPSTGDVLLDCFPDDPSRSELEGRVLKINPVEILVPSDLSEQTHRLLQ
SIAAASAQADDRVRVEKRDSTQFEFVSAMNTATEFYCHTQEKGSRSLSSVASLESPVICC
LGPLIQYLQEFNLERVLRSESSFRRLSCESEGMILGAATLRNLEILNNQTDGGLKGSLLW
VLDHTRTAFGKRMMRKWVSQPLTDMMSLSERQDAVQEILESPLLTLGSIKSLLSHLPDLE
RGICSIYHKKCSTQEFYLISSSLSRLGLELQALLPAIHSQISSALLRGVLLDTPNLLAPA
HSHLKVLNEKAAKSGNKTELFSDLSGFPVLQERREEIQTVMNEIQDHRKEVRRMLKAPAL
NYTTVSGQEFLIEVKNSLSSTVPPDWVKISSTKAVSRYHSPFLVERYKKLLQLREQLLLD
CQKEWTNFLDQFGEHYHTMKRAISHLATMDCLFSLAEVAKQGDYCRPEVSEDQRQILIRD
GRHPAIDLLRGEHNQYVPNLTELQGDGRRTMIITGPNMGGKSSYIRQVALICVMAQMGSY
VPAYETRLGMLDGIYTRMGASDNIYKGRSTFMEELTEASEIISRATDHSLVILDELGRGT
STHDGIAIAYATLEYFIRDVKALTLFVTHYPPLCELERVYPEHVSNFHMAFLLNEPDINT
EIDDEEVQPEFITFLYQLTEGAAGRSYGLNVARLADIPDPILHTAAHKARELESTVNARR
KNKKLLSDLLSISDRSSLMEWLQSHSALVQHQENTLPAISE
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtctctgaagaagtcgtgcaccgctcaaacctccatcagcagatacttcgga
ggtctgagcagcaggactgtgtctcagtgtgggattaacaagaatcctgccgagcagcag
ccttcaaggggcaagaagaaacggtcccctgatgatagttttggattgccaacaaaacga
accaagcttcctgtacatgacctgcaggtggaggatttaaactctgagcctccctccttt
cagagcaataaaaagacaacggtaatatcaagcccagaagcagcaggcctctgctcctcc
accttggagaagctgaaaggcttcacctgctcgactgaggccactgatggtgctagcagt
aaaatctgtgaaggaggaagcagtatccggcctactcaggacattactgaacaacaccgc
aatacaaataagcctcatcagccaggagaggagcatgaggaggaagaggatgttgaagaa
acagggggttcgaggcttgctgcttcaaaacaggggttccatttttctcagtttgccaat
tcaggaggagggggagggggagtcaggtttgcagagctaactctcccttcagacttgagc
gccccctcgaagcgctcgaagaaagtgttcacccccctggagcagcaggtgattcagctg
aaacgacagcacccggatgcattgttggctgtggagtgtggctacaagtacaggttcttt
ggagaggatgcagagattgctgcaaaggagctcaatatcttttgtcacctggatcataac
ttcatgacgtgcagcattccgacacaccgtctgtttgttcacgttcgacggttggtgtcc
catggacataaggttggtgtggtaaagcagacggagacgtctgcaatcaaggcctcaggg
gccaataagaacgctctgtttgctcgtaggctgagcgctctgtacaccaagtccactctg
gtgggagaggatgtgaacccagtctgcagtctaagggctgtggaggagggggtctgtgat
gaagtggtgtcggacccccctgacagcttccttctgtgtatcagtgagagttgggacaaa
gtgaagaagcagctaactgtggggctggtggcagtccagccgagcacaggtgacgtttta
ctggattgttttcctgatgatccttctcgatccgaactagagggtcgtgtcctaaagatc
aatcctgtggagatcctggtgccctccgacctctcagaacagactcacagactcctgcag
agcatcgctgccgccagcgctcaggctgatgaccgagtgagagttgagaagagggacagc
actcagtttgagttcgtctcagccatgaacacagcaacagagttctactgccacacccag
gagaaaggctctcgctctctgtcgagtgtagcatccttggagagcccagtgatctgctgt
ctggggcccctcattcaatacctccaagaattcaacttggagagagttcttagaagtgaa
agctcatttcggcgtctgtcctgtgagtcggagggtatgattcttggtgcggccaccctc
aggaacctggagatcttaaacaatcagacagatggcgggctgaagggcagtctgttgtgg
gtgttggaccacactcgcactgcatttgggaagagaatgatgaggaagtgggtgagccag
cccctcacagacatgatgtctctgtcagagaggcaggatgctgtgcaggagatcctggag
tcacccttgctcactctaggttccatcaaatctctgctgtcgcatctgcctgatttggaa
agaggcatctgcagcatttaccacaaaaagtgttccacgcaggagttttaccttattagc
agtagtctttcccgcctggggctggaactgcaggccttgctcccagctatccattcacag
atcagctctgcgctcctccgaggcgtcttgttggacacacctaacctgctggctccggcc
cacagccacctcaaggtgctcaatgaaaaggcagccaagtcgggaaataaaacagagctg
ttctcagatctgtccggcttcccagtgctgcaagagaggagagaggagatccagactgtc
atgaacgagattcaagaccaccgaaaagaagtccggcggatgctgaaggccccggcactc
aactacacgacagtgtctggacaggagtttctgattgaggtgaagaactcgctgtcgtcc
actgttccacctgactgggtcaaaatcagcagcaccaaggcagtcagcagatatcactct
cctttcctggtggagcgctacaagaagctgctgcagctccgagagcagctgctgctggac
tgccagaaggagtggaccaattttcttgatcagtttggggagcactatcacaccatgaaa
agagctattagtcacctagcaaccatggattgtctcttctcattggctgaggtggctaaa
caaggagactattgcaggcctgaggtgagtgaagatcagcgtcagattttgatcagggat
ggacgacatcctgcgattgacttactgaggggagagcacaaccagtatgtacctaacctc
accgaactgcagggggatggcaggagaaccatgataatcacgggtcctaatatggggggt
aagagctcctacatccggcaggtggccctgatttgtgtgatggctcagatgggctcctat
gtcccggcctatgagacccgcctgggcatgctggacggcatttacaccaggatgggggct
tcagacaacatctacaaagggcgaagtacattcatggaagagttgactgaagcctcagag
atcatttctcgtgcaaccgaccattcattggtgatccttgatgagctgggacggggcacg
agcactcatgacggtattgcgatcgcctatgccaccttggagtacttcatcagagatgtg
aaagccctcaccctgtttgtgacccattaccctcctctgtgcgaattggagcgggtgtat
cctgaacacgtgtctaacttccacatggctttcctactcaatgaacctgacatcaacact
gaaattgacgacgaagaggttcagccagagttcatcactttcctctaccagttaactgaa
ggagcagcaggacggagctacggcctcaatgttgcccgattggctgacatcccagaccct
atactacacactgctgcacacaaagctcgagagctggaaagcacggtcaacgccaggagg
aagaataaaaaacttctctcagatctcttgagcatctcggacaggtcatccctcatggag
tggttgcagtcacactctgcattggtgcaacaccaggaaaacacactccctgcaatcagt
gaatga
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