Eleginops maclovinus (Patagonian blennie): 134872956
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Entry
134872956 CDS
T09869
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134872956 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134872956 (lsm1)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134872956 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
134872956 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF658
Motif
Other DBs
NCBI-GeneID:
134872956
NCBI-ProteinID:
XP_063752407
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All DBs
Position
12:17939458..17942002
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AA seq
133 aa
AA seq
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MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTVLQQVSIEEILEEQRLQQQSKQETEKVKMLALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggacggcaagcctcattgacgacatcgacaagaagcacctggtg
ctgctccgagatggcaggacactgatcggttacctcagaagcattgatcagtttgcaaat
ttagtttttcatcagacagttgaacgcatccacgtggggaaaaaatttggtgacatcccc
agaggaatattcattgtgagaggagagaatgtagtgctacttggagagatagatgtggat
aagccctgtgacacagtccttcaacaagtctccattgaggagattctggaggagcaaagg
ttgcaacagcaatccaaacaggagacggagaaagtcaaaatgctggcactgaaggaccga
ggcctttcaatacccaaagccgataacttagacgaatactaa
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integrated database retrieval system
