Eleginops maclovinus (Patagonian blennie): 134872983
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Entry
134872983 CDS
T09869
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134872983 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
134872983 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134872983 (thoc5)
03041 Spliceosome [BR:
emac03041
]
134872983 (thoc5)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134872983 (thoc5)
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134872983 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
134872983
NCBI-ProteinID:
XP_063752430
LinkDB
All DBs
Position
12:complement(22330313..22338587)
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVVRSEGGTPEMKRGRGEAEQQDVRVYNEEVELDSRDPEQDFQQYKESC
ESLATIMSEIQELKANGAKEGSAEVEQRRMQGCIHFMNLKKLNRLAHMRLKRGRDQTHDA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSESEFYQEAPQEISRPHLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQSMKEKIQNSIEVKKEHLTSLQPGLNAIMQA
SVPVQEYLSMPFEQAQIQTEVARHLPPALYVLFVQANAYGQACDKNLSVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRKEMLKRHPLSLCLDLKCKDGS
ILHLHFYYLMNLNIMTVKAKVSTSTDLTSAISAGDLLKSDTLLSCLYSSDQGRETPNPAN
RYQFDKVGIVTFADYVEELGHPYMWVQSLGGLHFPKDSSEGVSVGSSLSASHMENTMKLL
RGRLQARLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTITQEEYMELPYTRHV
ADAGLAKESDLYFMSVVERGTARLQAALVMSPRYPEISPLFSLSLSWKGERTGRTDDNLR
AMESEINVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacgccctgaagaagcggaagtcaaaggtagtccgcagtgaaggaggaacc
ccagagatgaagcgaggtcgtggtgaagcggagcagcaggatgtgcgtgtgtataatgag
gaggtggagctggacagcagggaccctgagcaggacttccagcagtacaaagagtcatgt
gagagtttggccacaatcatgagtgagatccaggagctcaaagctaatggagccaaggaa
gggagtgctgaggtcgagcagagacgtatgcagggatgcatccacttcatgaatctgaaa
aaactcaatcgtctggctcatatgcgactgaagagaggcagagaccaaacacatgatgca
aagcaaaaagtggatgtgctgcaccttcagttacagaacctgctctatgaagtcatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaagagatcgacttg
gtgtctgagtcagagttttaccaggaggccccacaggagatttccaggcctcacctcact
aaaaatgatccccatcaactcacactggcccgactggactgggagcttgaacagaggaag
aggttggcagaaaaatacaaagagtcgcagtccatgaaggagaagatccagaatagcatc
gaggtgaagaaggaacatctgacaagcttgcagcctggactcaatgccatcatgcaggcc
tctgtccccgtgcaggagtacctgtccatgccgtttgaacaggctcagatacagacagag
gtcgcccgccacctgcctccagccctgtatgtcctgtttgttcaagccaatgcctatggc
caggcctgtgacaagaacctgagtgtctcgatcagcggtgatgtggatgaagccaaggcc
ctctccaaacctccagaagattcccaggatgacgagagtgactcagatgcagaggaggag
caagagaagacgaagagaagaaggccaactacagggggccagctggatgacaaaagaaaa
gagatgctgaaaagacaccctctgtcgctctgcttagacctcaagtgtaaagatggcagc
atcctccatctccacttctactacctgatgaatctgaacattatgactgtcaaggccaag
gtctccacttccacagacctcacctcagccatcagtgcaggggacctgctgaaatcagac
actctactcagctgtctctacagcagtgaccagggccgagaaacacccaatccagctaat
cgctaccagtttgataaagtggggattgtgaccttcgctgattatgtggaggagctgggc
catccctacatgtgggttcagagtctgggaggactgcacttccctaaagattcctcagag
ggtgtgagtgtgggcagttctctgagtgccagccacatggagaacaccatgaagctgctg
aggggacggctgcaggctcgcttggctttgcacaaacagtttgcctctttagagcacagc
atcatcccggtctccagtgagtgtcagcacctctttcctgccaagatcatctcccgttta
gcccgctggaccaccatcactcaggaggagtacatggagctgccatatactcgtcatgtg
gctgatgctgggctggcaaaggaatcagacctgtactttatgtctgtggtggaaaggggc
acagctcgactccaggctgccttggtgatgagtccccgttacccagagatctctcccctg
ttctccctctccctcagctggaagggagagcgcactgggcgcacagatgacaaccttcga
gccatggagagcgagatcaatgtgttcaaaaatgaactccaggggccccgtccaggacac
cagctcctgaccaatcagatttcacgcctctgtgtctgcctggatgtttatttggagact
gaaggtcaagatgacagtgtggagggaccgcgagagtttcccagggaaaagatgtgcctg
cgcaccgtcaggggtccaaatcgtctgaagccattcaagtacaaccaccctcagggcttc
ttcagtcaccgctag
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integrated database retrieval system
