Eleginops maclovinus (Patagonian blennie): 134873028
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Entry
134873028 CDS
T09869
Symbol
pole
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03030
DNA replication
emac03410
Base excision repair
emac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134873028 (pole)
03410 Base excision repair
134873028 (pole)
03420 Nucleotide excision repair
134873028 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emac03032
]
134873028 (pole)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134873028 (pole)
Enzymes [BR:
emac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134873028 (pole)
DNA replication proteins [BR:
emac03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
134873028 (pole)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
134873028 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
134873028
NCBI-ProteinID:
XP_063752484
LinkDB
All DBs
Position
12:complement(22584859..22602074)
Genome browser
AA seq
2291 aa
AA seq
DB search
MVLQNSGRYKSERGQGRGEQDNQDDGNSALKRLERSQFTDEMDARFGFDRIKEPGEKTGW
LINMHPTEVLDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYLSR
KFQGKVSKLEVIPKEDLDLPNHLVGLKRSYIKLSFSTVDELMKIKREISPAVRKNREREQ
SNDSYTSMLSSALSGGNVTSAEEDGPSKRISDQLDNIVDMREYDVPYHVRLSIDLKIHVA
HWYNVRYRGSAYLPEIVRRDDLVERPDPVVLAYDIETTKLPLKFPDAESDQIMMISYMID
GQGFLITNREIVSDDIEDFEFTPKPEYEGPFTVFNEDDEAALIRRFFDHVQETKPNIFVT
YNGDFFDWPFVETRAALHGLDMYKEIGFQKDNQGEYKSTQAIHMDCYRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKMTGDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTIRHAIEEEENIPLDQVTNFNEVCE
EIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKHGA
TCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPYFPNGPPRAFHSLNREEQAKHEKK
RLADYCKRAYKKTHVTRKEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
AQDSGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIMV
KEGFTNDQYHELVDPASLTYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGTNLEEVYASVAKVADYWLDVLYSKA
ANMPDQELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSMHDLDIRSILDWNYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIFKQKKISELFTSEGKRQVAHQTLG
AGQAADIEDFGMPPRPLQPAILISTKRKRASQGEDSQVESQDVALTQSWREILGAPPPIG
NTREDILVWLRYHKKKWELQLRQRKERKKKRRLLDGEAQTVRGGVIRDQGPTTGLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAT
YKKVNRMLPRSNIVYFLYEYSVPEDMYLKHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKHVVRDLAGREADTFDLENLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLTNLYTAERTALLEKTSEELLPPEKHNFEVRAEND
PKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISYN
VLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRLG
STVVYGNFNRIMLCTKKRRINDAISYVEYITNSIHSREIFHSLSISFSRCWEFLVWMDPS
NFSGVKGKLPSSLASGEDGAKQKKKGGEGDEEGSEDEEEDEVEEDDGDGVTDEVEELIES
NWNIMQYLPETASCQKYFLMIVSAYIAAVYQSMKEELRRNDPGATPVKRRGGSQATQQAV
GDLSALPGMIVFSQEYVSNELTQNFFTITQKIQKKVMGTRGVNQASEMFPVLPGSHLPLN
NPALEFIKYVCQVLALDANIVNQVNKLKRDLLRLVDVGEFSMQAQFSDPCNSYILPEVIC
HQCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQTQYDTESIEMALVEALQKKMMSYTLQD
LVCTKCKGVKEANMPLYCKCAGDFDLTFSAKSFFDQITVFRNIASHYSMSFLEENIDWLL
VMSPQITQSAR
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcaaaacagtggtcggtacaaatcggagcgtggacaaggacgaggagaacag
gataaccaggacgatggaaactcggccctcaagcgtctggagcgcagccagttcaccgac
gagatggacgcccggttcggtttcgacaggattaaagagccaggcgagaaaacaggctgg
ctgatcaacatgcatcctactgaagtcctggatgatgacaagaggatgatcagtgctgtg
gactattatttcatacaggaagatggaagcaggtttaaggtggcccttccattcaagcca
tacttttacatcgccactaaaaagaattgcgaaagagaagttatctcatatttatcgagg
aagtttcaaggaaaggtatcgaagcttgaagtcatcccaaaagaggacctcgacctgccg
aaccatctggttggacttaagcgaagctacatcaagctgtccttcagcaccgtggacgag
ctcatgaagatcaagcgtgagatctcacctgcggtacgcaagaacagagagagggagcag
tccaatgactcctacacctcaatgttatcgagtgccttatcaggtgggaatgtgacatca
gcagaggaagacgggccgtcaaagagaatctcagaccagttagacaacatagtggacatg
agagagtatgacgtgccatatcatgtccgattgtccatcgaccttaagatccacgtggct
cactggtacaatgtccgctacagaggcagcgcttacctaccagagatcgtacggcgggat
gatcttgtggagagaccggaccctgttgttttggcttatgacatcgagaccaccaaactc
ccactgaagttcccggacgcagagagcgatcagatcatgatgatctcctacatgattgat
ggacaggggtttctaatcacaaaccgagagattgtgtctgacgacattgaagattttgaa
ttcactcccaaacctgaatatgaaggtcctttcactgttttcaacgaggatgatgaggcg
gctctcatccggagattctttgatcacgttcaagaaaccaaaccaaacatctttgtgacc
tacaatggagacttctttgactggccttttgttgagactcgagctgctctccatggactt
gacatgtacaaggagatcggtttccagaaagataaccaaggagagtacaagtccactcaa
gccatccacatggactgctacaggtgggtaaagagagacagctacctgccggtggggagt
cataatctgaaggcggcggccaaggctaaactgggttatgacccagtggagctggacccg
gaggacatgtgtcgcatggctactgagcagccacagaccttagccacctactccgtgtcg
gatgctgtggccacgtattacctgtacatgaaatatgttcaccccttcatcttcgctctg
tgcaccatcatccccatggagcctgacgaggtgctgcggaaaggctccgggacgctgtgc
gaggctctgctcatggttcaggccttccacgcaaacatcgtcttccccaacaagcaggag
caggagttcaacaagatgaccggcgatggccacgtcatggactctgagacctacgtgggc
ggccacgtggaggcgctggagtcaggagttttccgcagtgacatcccctgccgtttcaaa
atgaacccggctgcgtttgacttccttctgcaaagagttgagaggacgattcgtcacgcc
attgaggaagaggagaacatccctttagatcaggtcaccaacttcaatgaggtttgtgag
gaaatcaaaaagaagctgatatcgttaaaggaggtcccgaacaggattgaatgccccctc
atctaccatcttgacgttggggctatgtaccccaatatcatcctcaccaaccgcctgcag
ccgtcagccatggttgatgaggccacttgtgccgcctgtgacttcaacaagcatggggcc
acctgccagaggagaatggcgtggcaatggagaggggagatcatgcctgccagccgcagt
gagtttcaccgcatccagcagcaactcgagtctgagaagttcccgccatatttccccaac
ggaccacccagggccttccactcactgaacagagaggagcaggccaaacatgagaagaaa
cgtcttgcagactactgtaagagagcctacaagaagacacacgttaccaggaaagaggag
cgcgtcaccaccatctgtcagagggaaaactccttctacgttgacaccgtgagagctttc
agagaccggcgctacgaattcaaaggactccacaaggtgtggaagaagaagctgtcggcc
gctcaggacagcggagacgccgctgaggtgaagcgctgcaagaacatggagatcctgtac
gattctcttcagctggctcacaagtgtatcctcaactctttctacggctacgtcatgagg
aaaggggcgcgctggtactccatggagatggctggcatcgtgtgcttcactggagccaac
atcatcactcaagccagagagcttgtcgaacaaatagggaggcctctggagctggacact
gacggtatctggtgtgtcctccccaacaccttccctgagaactttgtggtgaaaacgagc
aatgagaagaagcccaaggtgaccatctcctaccctggggccatgctgaatatcatggtg
aaggagggattcacaaacgaccagtaccacgagctggtcgatcccgcgtccctcacttac
gagaccaggtccgagaacagcattttctttgaggtggacggaccgtacctggccatgatc
ctgcccgcatccaaggaggaggggaagaaactgaagaaaaggtacgctgtgtttaatgag
gacggctcccttgctgagctgaagggttttgaaataaagagaagaggagagctgcagctc
attaagatttttcagtcgtcagtgtttgaggctttcctcaaaggcaccaatctggaggag
gtgtacgcctcagtggccaaagtggctgactactggctggacgttctgtacagcaaggct
gccaacatgccagaccaggagctgtttgaactgatttcagagaatcgctccatgtccaga
aagctggaggactacggagagcagaagtcgacttctatcagcacagctaagaggctggcc
gagttcctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtcatctcc
cgaaaacccgaggggtcgcctgtcacagagagagccattcctctggccatcttccaggcg
gagcccagtgtgaagaagcatttccttcgtaagtggctgaagatgcccagcatgcatgac
ttggacatccgctcgatccttgattggaactattacatagagaggttggggagtgccatc
cagaaaatcatcaccatccctgcagctcttcaacaggtgaagaacccggtgcccagagtg
aggcaccctgactggctgcacaagaaacttctggagaaaaatgacatcttcaagcagaag
aaaatcagcgagctgttcaccagcgagggcaagagacaggttgcccatcagactcttgga
gcaggccaagcggcggacatagaggactttgggatgccccccagacctctgcagccggcc
atccttatcagcaccaagcggaaacgggcgtctcagggagaggacagccaagtggagtcg
caggatgtcgcgctcacccagtcctggagggagatcctgggtgcacccccacctatcgga
aacacacgggaggacatcctggtgtggctgcggtaccataagaagaagtgggagctgcag
ctgaggcagaggaaggagaggaagaagaaaaggaggctgctggatggtgaagctcaaacc
gtcaggggaggagtgatccgggatcagggccccaccaccggcctgggaagcttcctccgc
agaacagcgcgcagcatcctggacatgccatggcagattgtgcagattgcagagaccagt
caccccggtctgtacaagctgtgggctgtgattggaaacgacctccactgcatgaagctc
aacatcccacgggtcttctacgtcaatcagaaagtcccgaaacaggaggagggagccact
tacaaaaaggtgaaccgcatgctgcctcgctccaacatagtgtacttcctttacgagtac
agcgtaccagaagacatgtacctgaagcacatcaacgagatcaacgctgacctctcagcc
cccgacattgaaggagtctatgaaacccaggtcccgttgctgttccgtgcgctggtgcag
ctcggatgtgtgtgtatggtgaataaacatgtggtgagggatctggctggcagggaggct
gacacctttgacctggagaatctggagatgaggtctctggcccagttcagctacctggag
cctgggagtgttcgccacatgtacctgtatcatcacagtcagggtcacaaggctctgttc
ggcctcttcatcccctctcagcgcaaagccagcatcttcgtcctggacacagtcagaagc
aaccagatgcccaacctgactaacctctacacagctgaacgcactgctctcctggagaag
accagcgaggagctcctgcctccagagaaacacaactttgaggtccgcgctgaaaacgat
ccgaaggctatttaccgcgctctgcaacgcattctgctaaactacaaggaggagcgtcgc
gggcccaccctcatcgcagtgcagtcaaactgggagttgcggcgcttggcagcagggatg
ccggtgcttgaggagtttccagtggttcccgtacatgtggttgatgagatcagctataac
gtactggactggcagcggcacggtgcccggcgcatgatccgccactacctcaacctggac
agctgcctgtcgcaggctttcgacatggcaaggtattaccacttacctgtggggaacttg
cctcaggatgtgtccatctttggctctgatttgttcctggcaagacatctgaggaaacac
aaccacctgctgtggctctcccccaccgccaggccggatctgggagggaaagaggccgat
gacagccgtctggtgatggaaagtgatgacaggggctctgtggagatcaatgctcaagga
tgctattccacagtgtgtgtggagctggacctgcagagccttgcagtgaacaccatcctc
caatcacaacatgtcaatgacatggagggcggggctagcttgggtgtcagttttgatgtg
atccagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctctggct
agctatgatgagacggctctctgctccaacaccttcaggatcttgaagagcatggtggtc
ggatgggtcagagagatcacacagtaccacaacgtgtacgcagacaaccaggtgatgcac
ttctaccgctggctgcgctcccccagctctctgctctacgaccccgccctgcaccgcacc
ctgcacaacatgatgaagaaggtgttcctacagttggtgtcagagttcaagcgtctcggc
tccaccgtggtgtacggaaacttcaacaggatcatgctgtgcactaaaaaacggaggata
aacgatgccatcagttacgtggaatacatcaccaacagcatccactccagagaaatcttc
cactctttgtccatctccttctcccggtgctgggagttcctggtgtggatggatccgtca
aacttcagcggtgtgaagggcaaactgccctccagcctcgcgtccggagaggacggagcc
aaacagaagaaaaaaggaggggagggagatgaggaaggcagtgaggacgaagaggaggat
gaagttgaggaagatgatggcgatggcgtgacggatgaggtggaggagctcatcgagagc
aactggaacatcatgcagtatctcccggaaactgcctcctgtcagaaatacttcctcatg
attgtctctgcctacattgcagcagtctaccagagcatgaaagaggagctgagacgtaac
gatcctggagcaacgccggtaaagagacgtggaggcagccaggctacccagcaggccgtg
ggggacttgagtgcccttcctggaatgatcgtcttctcgcaggaatacgtgtccaatgag
ctgacacagaactttttcaccatcactcaaaaaatccagaagaaggtgatgggtaccagg
ggggtcaaccaggcctcagagatgtttcccgtcctgcctggatcccacctgccgctcaac
aacccagccctggagtttatcaaatacgtctgccaggtcctggctctggacgccaacata
gtgaaccaggtgaacaagctgaagagagacctcctgcgtcttgtggacgtcggagagttt
tcaatgcaagcccagttcagtgacccctgtaactcctacatcctgccagaggtcatctgc
caccaatgcaacttctgtcgggacctcgacctctgcaaggacccatctgtggcacaggat
ggatccgtcctgcctcagtggttctgctcaaactgccagactcagtatgacactgagtct
attgagatggctctggtggaagctctgcagaaaaaaatgatgagctacacgctgcaggac
ctggtgtgcaccaaatgtaagggagtgaaggaagccaatatgccgctgtactgcaaatgt
gccggagacttcgacctcaccttctcagccaagagcttctttgatcagatcacggtgttt
cggaatatcgcatcccactacagcatgagcttcctggaggagaacatcgactggttgctc
gtcatgagtccacagattacccagagcgctcgctga
DBGET
integrated database retrieval system
