Eleginops maclovinus (Patagonian blennie): 134873103
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Entry
134873103 CDS
T09869
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03420
Nucleotide excision repair
emac04115
p53 signaling pathway
emac04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134873103 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
134873103 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
134873103 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134873103 (ddb2)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134873103 (ddb2)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134873103 (ddb2)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134873103 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
134873103
NCBI-ProteinID:
XP_063752586
LinkDB
All DBs
Position
2:complement(10920421..10925024)
Genome browser
AA seq
522 aa
AA seq
DB search
MKTRETKSADESESKSRVKKRAGENSGATLSKKLRERKDGETSKQVPPVKSTGVQKRAGY
GSILHYIYKSTLGQSLHSQMKQCLQEPFVRSLSLYQFHCATSPFDRRITCLEWHPTHLTT
MAVGSKGGDIYLWDFEVPEKKAFVQGNGAGDFIGGMKFCPTDPSRVYVASGEGTLTMQSF
EGRTPTVLSRTQDCGHDHHSVCYWYCCVDVSVSRQMLVTGDNVGQLALLGLDGKKIFSEK
LHKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHEKAVNSAYFNPL
DCSKLLTTDQYDQIRIYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIMAGRYPD
SRVCPGDQRTIDIFDANTAELVCQLQDPAVSGIKSVSMTFKNTGWGEMETRKLWSFTPII
IHLQVNKFSPMGDVIGSGMGVSVLIWNRNSSLMSDESAAQEETSTSAENSGSQRRNRQRP
SRDRRGPALDSKLKKKLASLEETETKTKTKSAKEKLAEMRKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagagagacgaagtcagcagatgaatctgaatcaaagagtagagtgaagaaa
agagccggggagaactctggagcaactctctcgaaaaagctacgagaaagaaaagatgga
gaaacatccaaacaagtgcctcctgtcaagtctacaggagtccagaagagagcagggtat
gggagcatcctgcactacatttacaagagtactctgggacaaagtcttcactcacagatg
aaacagtgtcttcaggaaccttttgttcgctcgctgtctttatatcaattccactgtgca
acaagccccttcgaccgcagaatcacctgtctggagtggcatcccactcacctaaccact
atggctgtgggctccaaaggcggagacatttatctgtgggactttgaggtgcctgagaag
aaagcttttgtccaagggaacggagcaggagactttattggtgggatgaaattttgcccg
acagacccctccagagtatacgtggcttctggtgagggcacactgaccatgcagagcttt
gagggtcgcacacccaccgtactgtcccgaactcaagactgtggacacgatcaccacagt
gtttgttactggtactgctgcgtggatgtgtctgtaagtcgacagatgcttgtcacagga
gacaatgtgggacagctcgcactcctgggtttggacggcaaaaagattttcagtgagaag
ttgcacaaagccaaagtgacccatgcagagtttaactcccgctgtgattggttgttggcg
acggcatcagtcgaccacacggtgaaactttgggacctgagaaacatcaaagacaagaaa
agcttcctccacgagatgccccatgaaaaagctgtcaactcagcatatttcaaccctctg
gactgctccaagttgctcaccacagatcagtacgaccagatccggatctactcctctcct
gattggtcgaagcctcaacatatcatccaacatccacacagacagtttcagcatctcaca
cccatcaaggccacatggcaccctgtctatgacctcatcatggcaggccgctacccggac
agccgggtttgccccggagaccagaggaccatcgacatctttgacgccaacacagcagag
cttgtgtgtcagctgcaggatcccgccgtctcagggatcaaatctgtgagtatgactttc
aaaaacactggatggggggaaatggagacaagaaagctgtggtcttttactccgataatt
attcatttacaggtaaacaaattcagtccaatgggtgatgtgattggatctggaatgggt
gtgtcggtgctgatctggaatagaaacagttcgttgatgagtgatgagtccgcagcacag
gaggaaacttctacctcagcggaaaattcaggaagccagcggaggaatcggcagcgcccc
agcagggacagaagagggccggctctggattcaaagctcaagaagaaactggcttctctg
gaagaaacggaaaccaagaccaagactaagagtgctaaagaaaaactagcagaaatgagg
aagaagtaa
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