Eleginops maclovinus (Patagonian blennie): 134873222
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Entry
134873222 CDS
T09869
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134873222 (tncb)
04518 Integrin signaling
134873222 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134873222 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134873222 (tncb)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134873222 (tncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_Tenascin
EGF_2
FN3_DSCAM-DSCAML_C
DUF7949
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
FN3_Tor_3rd
fn3_2
hEGF
Big_5
NDNF_C
Motif
Other DBs
NCBI-GeneID:
134873222
NCBI-ProteinID:
XP_063752757
LinkDB
All DBs
Position
12:3688512..3738345
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AA seq
1692 aa
AA seq
DB search
MAVKGFLLGFVTVNLLLELSTAGLVKKVIRHRRDALSPKQSQENLTLPHPDQPVVFNHVY
NINVPSTSLCSVDLDAPGDTDLKQKSVPVEMQNSEHMEHTLDGDNQIVFTHRINIPKQAC
GCDNQLPDIKDILSRLEMLESEVSSLREQCSSGTGCCGAQVTGEVSTKPFCNGHGNWSTE
TCSCICEPGWKGPNCTELECPNDCQDQGRCVDGKCECFEGFGGDDCSNELCLLDCGDYGH
CVDGFCLCEEGFIGEDCGQTNCLNNCLGRGRCVEDECVCDEPWTGFDCSELICPNDCFDR
GRCVNGTCFCEEGYTGEDCGELTCPGNCNNRGMCVNGQCVCQTGYSGEDCSKLTCPKNCN
ERGHCFNGKCICDPGYEGEDCSILSCPDNCSNRGQCVDGECVCDVGFQGEDCSELSCINN
CQDRGRCVNGKCICNKGYGGEDCNIKTCPKDCQGRGECVDGKCVCFVGFTGKSCGELTCP
NDCLDRGRCVNGQCVCHKGFTGEDCSEKTCPKNCLDRGYCVDGDCVCYEGFSGLDCSMLT
CPENCQNQGRCDNGVCVCDEGFIGDDCSEVSPPKDLTAEVVSPETVDLSWKNEMRVTEYL
ITYVPTAAGGLELDMRVPGNQMMTTIKELEPGVEYLISVYAVLNNKKSLPVSARVATHLP
EPEGLKFKSVRETSVEVEWDPLDIPFDSWNIIFRNTKEEDGEILNSLGRPETTFEQSGLG
PGQEYEVKLEVVKNNKRGPPASQNVVTMIDAPSQVDVRDVTDTTALVTWFQPVAQVQGVS
ISYGPSSNPTDRSVVELSSSDTQYHLGGLTPDTQYEVSLSSHMGEQSSIPVYQSFLTDLD
APKDLQTVELTDESITLEWKNSQAPVENYRIKYGPLSGGEHGELLFPPGPKDTTTAKITG
LRPGTEYGMGVTAVTDERESRPTTTNAVTALDAPRELAVVEVTETTMMLQWKRPLAKLDS
FRLVYISADGHRAEDVLPGSSESHILRGLTAGMLYTISIIAERGRRTSAPSTISAATEEE
KPVVVNVTISDVSWDSFLLSWATEDRRLEGFLIEVTDAETGSEWQNHTLSADARSIAISS
LSSSTWYRANLYGVYRGALLEPVFADTITEAEPEVQALLVSDVGPESLKLAWMAEEDAFD
TFVIMVSQVQPGQPRELVLGDDERSTIITDLTEDTEYEIQIFGLILGRPSKSVMERVITD
LGSPKGIRFSDVTDTSATVHWVVPRARVDSYRVTYVPAHGGNAKTLTVEGSEAYTVLPNL
TPGVTYEVTVVAVKGQRESEPGSDSVTTALDKPRGLNAVNITDSEALLLWQPAIATVDGY
VITYSADSVPPVMERVSGNVVEFEMSSLTPATHYTVKVYAVRDLSKSAATTTEFTTDVDA
PQDLAASNIQTESGLLSWKPPRADITGYILSFESADGTIREVVLSPTAVSYNMAQLSAST
QYSVKLQAIAGPKRSRIITTVFTTTGVLYRYPRDCSQALLNGDTSSDLYTIYLGGDESQP
LQVYCDMGTDGGGWIVFLRRQSGKLEFFRNWKNYTAGFGDMNDEFWLGLSNLHKITAGGP
YELRVDLRDKGETAYAQYDKFSISEPRSRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDN
DIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPS
NFRNLEGRRKRS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggccgttaaaggcttcctcttgggctttgtgaccgtgaacctgctcctcgagctctcc
actgctggcctggtcaaaaaggtcatccgccaccgcagagatgctctgagtcctaagcaa
agccaggagaacctcaccctgccccaccccgaccagccagtggtgttcaaccacgtctac
aacatcaacgtcccctccacgtccctctgctctgtggacctcgacgcccctggtgatacc
gatctgaaacaaaagagtgtcccggtggagatgcagaacagcgagcacatggagcacacc
ttggacggagacaatcagatcgttttcacccaccgcatcaatatacccaagcaggcgtgt
ggctgcgacaaccagctgcccgacatcaaggatatcctgagcagattggagatgctggag
tccgaggtgtcgagtctgagggagcagtgcagcagcgggacgggctgctgtggagctcag
gttacaggtgaagtgtccacaaagcccttctgtaatggccatggtaactggagcactgag
acctgcagctgcatatgtgagcctggatggaagggccccaattgcaccgaacttgagtgc
cccaacgactgccaggaccagggccgctgtgtagatggcaagtgcgagtgctttgagggc
tttggtggggacgactgcagcaatgagctctgcttgttggactgtggtgactacggccac
tgtgtggatggcttctgcctctgtgaggagggcttcatcggggaggactgtggtcagacc
aactgtctcaacaactgcctcggccgtggacggtgcgtagaggacgagtgtgtctgcgac
gagccttggacaggcttcgactgctccgaactcatctgtccaaacgactgcttcgaccgc
ggacgctgcgtcaacggcacctgcttttgtgaagagggctacaccggagaagactgcggg
gagctcacttgtcctggcaactgtaacaaccgtggcatgtgtgtgaacggccagtgcgtg
tgccagaccggctacagtggagaggattgctccaagctcacctgtcccaagaactgcaac
gaaagaggccattgtttcaacgggaagtgcatctgtgatccaggatatgaaggtgaagat
tgctccatcctctcctgccctgacaactgtagcaacaggggccagtgcgtcgacggagaa
tgtgtgtgtgacgtaggctttcaaggtgaagactgtagcgagctctcctgcattaacaat
tgccaagaccgtggtcgctgcgtcaacggaaagtgcatttgtaacaaaggctatggcggg
gaggactgcaacatcaagacctgtccaaaagactgccagggacgtggagagtgcgtggac
ggcaagtgcgtgtgcttcgtcggcttcactgggaaatcctgtggcgagctgacttgcccc
aatgactgcctggaccgcggtcgctgtgtcaatggacaatgcgtttgtcataagggcttc
actggcgaagactgcagcgagaagacgtgtcccaagaactgtcttgatagaggttactgc
gtcgatggcgattgtgtgtgttacgaaggtttctccgggttggactgttccatgctgacc
tgcccagaaaactgccagaaccagggccgctgtgacaatggagtgtgcgtctgcgacgag
ggcttcattggggacgactgctcagaggtctcaccgcccaaggacctgacagcggaggtg
gtaagcccagagacggtggacctgtcctggaagaatgagatgcgtgtcacagagtatctt
atcacttatgtaccaacggccgctggaggtctggagctcgacatgcgggtgccagggaac
cagatgatgaccactattaaggagcttgagcctggtgtggagtacctgatcagtgtctat
gctgtgctcaacaacaagaagagtcttcctgtcagcgctcgggtggctacacatctgcct
gagccggaggggctgaagttcaagtcagtgcgggagacgtcagtggaagtggagtgggat
ccgttggacattcccttcgatagctggaacatcatcttcagaaacacgaaagaggaagat
ggtgaaattcttaactccctcggccgtccggagaccacctttgagcagtcgggcttgggc
cccggccaggagtacgaggtcaagctggaggtggtgaagaacaacaagcgtggaccgcct
gcctcccagaacgtggtcacaatgatcgatgcccccagccaggtggacgtgcgggacgtg
acagacaccacagcactggtcacctggttccagcccgttgctcaggtgcaaggggtcagc
atttcctacgggccaagctccaaccccactgatcgcagcgtggtggagctttcctccagt
gacacccagtaccacctgggaggcctcacacccgacacccaatacgaggtgtctctgtcg
tctcacatgggcgagcagagcagcattcctgtgtaccagtctttcctcacagacctggac
gcccccaaagacctgcagacagtggagctgacggacgagagcatcactcttgagtggaag
aacagccaagctccagtggaaaactaccgcatcaagtacggacctctgtcaggaggggag
cacggagagctgctcttcccccccggacccaaggacaccaccacagccaagataacaggc
ctgagacctggcacagagtatgggatgggcgtgaccgcggtgacggatgagcgggagagt
cggccgacgaccaccaacgcagtgactgcactggatgctcccagggaactggctgttgtg
gaggtgacagagaccaccatgatgctgcagtggaaacgccccctggctaaactggactcc
ttcagattggtgtacatatcggctgacggccacagggcggaggacgtactgccgggcagc
tccgagtctcacatcctgaggggcctgacagccggcatgctgtacaccatcagcatcatc
gctgagaggggccgcaggaccagtgcgcccagcaccatctcagcagccacagaggaggag
aagcctgtggttgtcaatgtcaccatcagcgatgtgtcgtgggacagcttcctgctgtcc
tgggctactgaggacaggaggttggagggttttctgatcgaggttaccgatgcagagacg
ggctctgagtggcaaaaccatacgttgtccgctgatgctcgcagcatcgccatctctagc
ctctcctcgagcacctggtacagggccaatctgtacggggtgtacaggggggccctgtta
gagcccgtctttgcagacaccatcacagaggcagagccagaggtgcaggctctcctagtg
tccgatgtcggccctgagagccttaagctggcctggatggctgaagaggacgccttcgac
acctttgtcataatggtgagccaggtccagccaggccaacccagagagctggtgctgggg
gatgatgagcggagcacaatcatcacagatctcacagaagacaccgagtacgaaatccaa
atctttggactcattttgggaagaccctccaaatcagtaatggagagggtaataacagac
ctgggctcacccaagggcatccgcttctctgatgtcactgacacgtccgccacggttcac
tgggtggtccccagggctcgggtggacagctacagggtcacatatgtaccagctcacgga
ggaaatgctaagacgcttacagtggaaggctctgaagcttacactgtgctgcccaacctg
acacccggggtcacatacgaggtcactgtggtcgccgtgaagggtcaaagggagagtgag
cctggatcggacagcgtcaccacagctctggataagccccgtggtctgaatgcagtcaat
atcacagactctgaggctctgctgctctggcagcctgccatcgctacagtagacggctac
gtcatcacctacagcgctgactcagtgcctccagtgatggagcgtgtgtcaggaaacgtg
gtggagtttgagatgtcctccctgactccagccactcactacacagtgaaggtttacgct
gtgagggacctgtccaagagtgcagccaccaccacagagttcaccacggatgtggacgcc
cctcaggacctggcagccagtaacatccagacagagagcggcctgctgagctggaagccg
ccgcgcgctgacatcaccggatacatcctgagctttgagtctgcggacggcaccatccgt
gaggtcgtcttgagtcccactgcggtgtcctataacatggctcagctcagcgcgtccaca
cagtactctgtcaagctgcaggccattgctggaccaaagagaagccgaatcatcaccact
gtcttcaccaccactggcgtgctgtacagatacccccgggactgctcccaggccctgctg
aatggtgacacctcctcagacctgtacaccatctacctgggtggagatgagagtcagccc
ctgcaggtgtactgcgacatggggactgatggaggcggatggatcgttttcctccgcaga
cagagcggtaaactggagtttttccgcaactggaagaattacacagcgggcttcggagac
atgaatgatgaattctggctgggcctgtctaacctgcataagatcacggctggaggcccg
tacgagctgcgagtggacctgagagataagggagagacggcctacgctcagtacgacaag
ttctctatctctgaacctcggagccgctacaaggtccacgtaggaggatacagtggaaca
gcaggggactccatgacttatcaccacggccggccattctccacctacgaccatgacaac
gacattgctgtcaccaactgtgccctgtcctataagggagcgttctggtataagaactgc
caccgtgtcaacctcatgggacgatatggagacaacagtcacagcaagggggtgaactgg
ttccactggaagggccatgagcactcgatcgagtttgccgagatgaagatcaggccgtcc
aacttcaggaacctggagggaaggaggaaacgatcatag
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