Entry |
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Name |
(RefSeq) LOW QUALITY PROTEIN: protein shortage in chiasmata 1 ortholog
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KO |
K28108 | shortage in chiasmata 1 |
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Organism |
emac Eleginops maclovinus (Patagonian blennie)
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Brite |
KEGG Orthology (KO) [BR:emac00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:emac03036]
134873304
Chromosome and associated proteins [BR:emac03036]
Eukaryotic type
Meiosis-specific proteins
Others
134873304
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
12:10326555..10340764
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AA seq |
1548 aa
MVSQAQPNSEHLVRILSQSSTAENDNDRVFPTQTFSANRFKALDYVFESTTSLKVMMNLL
ALPPPYLPGSGELYPDRGELPEASYRTPWIRGKLISTCKLFVSGSVLEDLGERKRPVNCP
ERFNVTLSELKGDFEMIPSSNPDSVNELNQDELVCLLKELHTENPLQESFFKLTTDHMKP
GNENKDLLLPEELIVVDYLLHFKRHLPTLKVKMSRLWTLPVADPLLCSTGKLLSEDCVFR
HCASYGKPPDANTSDFQTCADIQEEFGKESLIQEESLLLPVVVDTLYLSWEKCTAFSSIC
GQMDVSPEQLHEQPPVLDMLHKGNXHYKSKKRSTQMLTFLLPAIASVPSVSVDISQYEEP
EESSNKCNMDGGLMELAGRALLPSEMELEVTLTPSPKMSQIQICPSTCDLQQEELSALSR
LSLVSARAQSEMEAALWAAEKHPTSVVGFLLAEPQIYEPVVEFQPLSEAWRVRKSENQSF
VGVEDKLQSQRETGPPQVYLCSSREFTESLTSESPPTTEEKMEAFIKLSPEHLEIGSETI
YPTNKTQLRQPKKCERVAFHAEAPLEDSHLHRETVADTSQNAFLMHNTNDKDVKPAAVIF
SDPAADTNTKDNVSEKRFSEVAAMFSTRDTDRREHSKREQSAVSPRDDPGALLVAGRPAD
KEMDSLSXFMILRSQQRAQDTATRQSSSPAVMVGQQKAPSELHQPPPPPPPPPLQRQTSD
KRLTYLNGAVSGNATREQKAAVQATGQNIPQSAGFEGRQEYRVIPVQATASQQQAHCELL
AFAEPCLISARQLGLNILGPGDFSCLAPDQTHFILKQQEKALCRKHAQSTETVRDQEVLF
NQAAVIHVLVTFKELLLKCDLKTALDYLTKAAEACADQSLQQLVKRLQIVLFLSHKNQES
DLKLLKLQQLLAAQLQGRQGQNTVEKILIMLSVDSDHITSLIISSLSNVTGAAVTAVCPE
GDKKKLNGASVVSRMHHSVCVVVHEQHVGPDFPWSCFSLVVEYDHPGQSPWATVCRERGI
SHLSFNTIISDTEDNRKDWWCLEDNVPNVLFVTEGLLNCPLLLQTLESGCNITVLERSHC
PSLQFLGRTQHYSVITVDESTAIVIQEEDELCQERASESIVMRLTALSLQYNCCWLILHC
RESQGGGFSREAFSNLVLIYSSLVLFGMKSEDLDVKVLMLSDVMEISKWISRICFHSLMA
SERDPLHFLDRDWLTVIPSEEETCLLQFPCINPLVSQLMLRKAPSVQWLLRASLSQLKEL
LPEVPQKVLKLFSDTTALYTESQAVLTETTQHPSLPNSLWTTTADPELNDSEPQPELFCS
DGNSSFLFEADRSFCEPDTDSFQEGNTDFRLDVRASFSTPEDLQRPQRSWTSSGQWREKD
REEVKFSGWRSRTGAVGRVVGRVNYEWTPKAPTILNIHTPGVQRKSPFKLDSPLSFSTVP
QQPGNGQMSTHSQVYSDLQHPDNYGLNPPAEVTLWGQGQRSNNFLSDSRDTTMISTSYGT
RCWIGQERKRRGEAAGLIETVMTPLKRGRLSYEKVPGRSDGQTRLTLF |
NT seq |
4647 nt +upstreamnt +downstreamnt
atggtctcacaggcgcagccaaattcagagcacctggtccggatactcagtcaaagctcc
actgcagagaatgacaacgacagggtttttccgactcaaacattctctgctaacagattt
aaagccctcgactatgtgtttgagagcaccaccagtctgaaggttatgatgaacctgctg
gcccttccgccgccatacctccctgggagcggtgagctgtacccggacagaggagagctg
cccgaggcctcctacaggaccccgtggatcagaggaaagctgatctccacatgcaaactg
tttgtcagtggttctgtgcttgaggaccttggagaaagaaagcgtccagtcaattgtcct
gaaagattcaatgtgactctgagtgaactgaaaggggattttgagatgataccaagctct
aatcctgactcagttaacgagctaaaccaggatgagttagtctgccttttaaaagagttg
cacactgaaaatccacttcaggaatcatttttcaagttgacaactgaccatatgaaacct
ggaaatgagaacaaagatcttctcctgccagaagagctcatcgttgttgattacctgctg
cactttaagagacatttacccacgctgaaagtcaagatgtccaggctgtggacgctccct
gtggccgaccctctgctctgttctacagggaaattactctcggaggactgcgtattcagg
cactgtgcgtcttatggaaaacctcctgatgcaaacaccagtgactttcagacatgtgca
gacattcaagaggagtttggtaaagagtcgctaatacaagaagagtctctgctgctgccg
gttgttgtggacacactgtatttgagctgggagaagtgcaccgccttttctagcatttgt
ggtcaaatggacgtttctcctgaacagctgcatgagcaacctcctgttctggatatgctt
cataaaggtaactaacattataaaagtaaaaaaagatcaacacaaatgctaacatttctc
cttcctgccatcgcttcagttccatcagtatcggtggacatttcccagtatgaagaacca
gaagagtccagcaacaagtgcaacatggatggaggcctgatggagttggcagggcgagcg
ttgctgccatctgaaatggagctggaggtgactttgacgccatctcccaagatgagtcaa
atccaaatctgtccgtcaacatgtgacctgcagcaggaagagctgtcggcgctcagcaga
ctgtctttggtgtcagcgagggctcagagcgagatggaggcggctctttgggcagcggag
aagcatccaacctctgtggtgggctttctgttggcagagcctcaaatatatgaaccagtc
gtggagtttcagccgctgtctgaagcctggagagtcagaaagtcagaaaatcaaagcttt
gttggcgttgaagacaaactgcagtctcagagggagacgggacccccccaggtgtatctg
tgcagcagccgcgagttcacagagagcctgacctcagagtctccccccaccacagaggaa
aagatggaggccttcataaaactgtcacctgaacatttggagattggatccgaaacgatt
tatccaacaaacaagactcagctccgtcagccaaagaaatgtgaacgtgttgcttttcat
gctgaagctcctctggaggactctcatctccatagagaaactgttgctgacacgtctcag
aacgccttcctgatgcacaacacaaacgataaggacgtaaaacctgcagcggtaatattt
tcagaccctgctgctgacaccaacactaaagataacgtttcagaaaagaggttttcagaa
gttgcggccatgttttccactcgtgacacggacaggagagaacacagtaagagggagcag
agtgctgtgtcccctagagacgatcccggagctctgcttgttgcaggacgtcccgcagac
aaggagatggactctctgtccnacttcatgatcctgaggtctcagcagagagctcaggat
actgccacacgtcagagctcatctccagcagtaatggtggggcaacaaaaagctccatct
gagctccatcagcctcctcctcctcctcctcctcctcctctgcagaggcaaacatcagat
aagaggctgacgtatttgaatggtgctgtgtcaggaaatgctaccagagagcagaaagca
gcggttcaggcgacgggtcaaaacatccctcagtccgcaggatttgaaggccgacaggaa
tacagagtaataccggtccaagccaccgccagtcagcagcaggcccactgtgagctgctg
gccttcgctgagccttgtttgatctctgccaggcagctggggctcaacatcctggggccg
ggagacttcagctgcctggccccggaccaaacgcacttcatcctcaaacagcaggagaag
gcgctctgcaggaaacatgcacagagcacggagacggtcagagatcaggaagtactgttc
aaccaggcggctgtgattcacgtgctggtgacattcaaggagctgctgctgaagtgtgac
ctgaagactgcattggattacctgaccaaggcagcggaggcgtgtgcggatcagagtctg
cagcagctggtgaagaggctgcagatcgtcctcttcctcagtcacaagaaccaggagtct
gacctcaaactgctgaagctgcagcagctgctggccgcacagctgcagggcagacaagga
cagaacacagtggagaaaattctcatcatgctatcagtcgactctgaccacatcacatct
ctaatcatcagcagtttgagcaacgtgaccggtgctgctgtaactgcagtttgtcctgaa
ggggacaagaagaaactcaatggagccagtgtggtcagcagaatgcatcacagtgtgtgt
gtggtggtgcatgagcagcacgtcgggccggacttcccctggagctgcttctctctggtg
gtggagtacgaccatccgggacagtcaccatgggcaaccgtctgcagagagaggggcatc
agtcacctcagcttcaacaccatcatctccgacactgaagacaacagaaaagactggtgg
tgcctggaggataatgtgcccaatgtgctgtttgtcacagaggggcttctcaactgtcct
ctgctgctacagacactagagtcaggatgtaatataaccgtactggagaggagccactgt
ccatccctgcagttcctcggaaggacccaacactactctgtgatcacggtggatgaaagc
accgctatcgtcattcaggaggaggatgagctgtgtcaggagcgggcgagtgagagcata
gtgatgaggctgactgctctctctctgcagtacaactgctgttggctcatcctgcactgc
agagaaagccagggaggaggattttctagagaagccttcagcaacttggtgttgatttat
tcctctctggtcctgttcggcatgaagtctgaggatctagacgtcaaggtgctgatgttg
tctgacgtaatggaaatatccaaatggatcagccggatctgcttccacagcctgatggcc
agtgagagggatcctctccacttcctggacagagactggctgactgtgatcccgtcagag
gaggaaacgtgcctattgcagttcccctgtattaaccctctggtgagtcagctgatgctg
aggaaagccccgtcagtccagtggctcctgagggcctctctttcccagctgaaggagctc
ctccctgaagttccacaaaaagtcctcaagctgttcagtgacaccaccgccctgtacaca
gagtctcaggcggtcctgactgagacaacacaacaccccagcctacctaacagcctgtgg
accaccactgctgaccccgagctcaacgactctgaaccccagccagaactattctgtagt
gacggcaacagcagcttcctgttcgaagctgatcgcagcttctgtgaaccggacacagac
tccttccaggagggcaacacagactttagacttgacgtgagggcttcctttagcactcca
gaggatctccaacgcccccagaggagctggaccagcagcggtcagtggagagagaaggac
agagaggaggtgaagttttccggctggagaagcagaactggagccgtggggagagttgtt
ggaagagtaaactatgagtggactccaaaggctccaacgatcctcaacatccatactccc
ggagtccaacgcaaaagtcctttcaagctggactcccccctcagcttcagcaccgtcccg
cagcagccaggcaacggtcagatgtccacgcactcgcaagtctacagtgatctccagcat
cctgacaactacggtctgaacccccctgcagaggtcacgctgtggggtcaaggccaaaga
agcaacaattttctcagtgacagcagagacaccacgatgatttccactagctacggcacc
agatgctggatcggacaagagaggaagaggaggggcgaggctgcaggtttaattgaaacg
gtgatgacaccgctgaagagggggaggttaagctatgagaaggtgcccggccgaagtgat
ggacagacgaggctcacgttattttaa |