Eleginops maclovinus (Patagonian blennie): 134873467
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Entry
134873467 CDS
T09869
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134873467 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134873467 (skic3)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
134873467 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_17
TPR_8
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
HAT_Syf1_CNRKL1_N
ANAPC8
TPR_MalT
TPR_15
HEAT_Nup120
PknG_TPR
DUF7017
Motif
Other DBs
NCBI-GeneID:
134873467
NCBI-ProteinID:
XP_063753164
LinkDB
All DBs
Position
12:25209194..25221800
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKAGLKSARDAIKNKEFKEALKHCKNVLKLEKNNYNAWVFIGLAASELEQPEQSQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFQVELPNVYQKLVELYTSSDKNKCYETIS
KLTNIYQSDKEYSKLAKVRLLLIQVKEEEGVDRKELLQLWQQLTKLLSDCLNGEVQDKEI
QQYIITAYEKAMMLMDPVPGEEHKKMSADYVKCLSKLPQEDTKMKEACESMLSLYPNQSY
PLEMLCSHYLETGLQDEGTVSCFSRLLDLAPSSGIGHLGLGTKALQEGRFKDAIRDLSQG
LKKTSSSTGWCSLAEAQFKMQRYLDSASSCTQGLTLCVPGDKELRVKLLKLKLEALVRSG
GEEAADQALETFSQIPDAEKDPVLVALRGHAYLYKGQVDEALKVSSELLASNPNLTQALV
LRGQAHLVQGELQLAEESFLKAASQSPDCGEYYFLLGRLYWDMGEETRKDRRKTHTHLLK
AAKLDPNLGCVFRYLGHYYREVAKDHARARGCYKKAFEMDNDDAESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEYQQAVSDLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPDSIYSVYQAAAIKQTLGKFREAAAEYLQVTAQQDY
VPALKGLGECQLSLAKGLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSSVSPNRAQVIMPAPLAGLDPNTQSPTLNQAQTLKVGERCFARALQLMSAVPSLWYDL
GLNYYHQSSLPGPTEEDQNSSSLLLEKAQQCLKKAIMMDSGNHNYWNALGVISMSRGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHKAFKIAQSLEPLYVNCWIGQA
LIAEQVGSYDAMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSTLYRYNIVQMNAV
SAAQVSLSKYTERIQSDPDAFIMLGFLNEHLQLKRQAVQAYKRAVELLQSMSSEEALAFA
LGSYGRALCTSGQSEEAVRVYNSTPLQELSDLTGLALSYCREGLIPESISAYERALAVAS
SEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPIPESLLCLCALGLVHSDATLAA
AALTELLKQGPASGSVIEQRCLLTCSLLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPRKANGGAMAGHVACLSSMTLGKRALLYSGVNQLANGRHSGEDKHRNALKTMQR
AVMLCPDDPATWAGLMAACHTENTSCYLSGSAPCRRGLEQTLMSVVSEKVHNVEEIERPL
AQTLEGWVLQQAVTGLMLGGQLEQAEALCTQVLSVSPEHPAVTLSLRQVQCQRLLLAGGD
TVLPDSVLEQLNATVMMNPTNLGGWHWLAEVYCSQGLLVQAVMAYRQSLQIASQLGLHSS
QVSSLLRLALLALGPCMAGVPGNDWTNMTAEATTEVLKLGSSSVALLFQALFQFVTKMAA
RETRRLLERLAYSQDVPVTVVQVASWYLLRHLHSKNDQELMNVLLQHAKMNRDQRLLEFH
SLLSSSSA
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaagaagtgaaagcaggccttaaaagtgccagggatgccattaaaaacaaa
gagttcaaagaggctctaaaacactgcaagaatgttttgaaacttgagaagaacaattat
aatgcctgggtgttcatcgggttggcagctagtgaactcgagcaaccagagcagtcacag
acagcttataaaaaggctgtggagctggagccagagcagctgctggcatggcagggcttg
gcaaatctttatgaaaagaccgatcagtgggacttccaagtggagctacctaacgtctat
cagaagcttgttgagctgtatacaagctctgacaaaaataaatgttatgagaccatcagt
aagctcaccaacatctatcagtctgacaaagaatattctaagttggcaaaggttaggctg
ctgctcatccaagtgaaggaggaagaaggagtggacaggaaagagttactgcagctatgg
caacagctgaccaaactcctctctgactgcctcaacggggaagtgcaggacaaggaaatt
caacaatatataatcacagcatatgaaaaggctatgatgctaatggatcctgtcccaggg
gaggaacacaagaagatgtcagctgactatgtcaaatgtctttctaaactgccacaggaa
gacaccaaaatgaaagaggcctgtgagtccatgctctcgctctacccaaaccaaagctat
cctcttgaaatgctttgttctcactacctcgaaacaggtcttcaggatgagggtacagtc
agctgtttctcccggctcctggatctggcccctagcagtggaataggtcacctgggtctg
ggcaccaaagcactgcaggaaggaaggtttaaagacgccatcagggacctttctcaaggg
ttgaagaaaacgagctccagcacaggatggtgcagtctggctgaggcgcagtttaaaatg
cagagatatttagacagtgcttcatcatgcacccagggactgacgctgtgtgttcccgga
gacaaagagctgagggtcaaactgctaaagctgaagctagaggctttggtcaggagtgga
ggagaggaggctgcagaccaggctttggagaccttctcccagattccagatgctgaaaaa
gaccctgttctcgtagcgcttagaggacatgcatacctctataagggacaagttgacgaa
gcacttaaggtgtcctcagagctgctggcctctaaccctaacctgacccaggcgctggtt
ctgagaggacaggcccatttggtgcagggtgaacttcagttagcagaggagagtttccta
aaggcggcgagccagagcccagactgtggagagtattatttcttgctcggacgactctat
tgggacatgggagaagagacccgtaaagaccggcgcaaaacccatactcacttgctcaag
gctgcaaagctagacccaaacctcggttgtgttttccgctacctcggacattactaccgg
gaggtggcaaaggatcatgcccgggcccgaggctgctataagaaggcctttgagatggac
aacgatgatgccgagtctggagctgcctcagtggacctcagtatggagcaggacgacatg
gacactgccttagcgatccttcagtccgtgattgagaaagccactccaggctcggctaaa
tgggcgtggatgagacgagggctgtactacctgaaggttggagagtatcaacaagctgta
tctgacctgcaggcagctctgagagcagatcccgaggactgggtgtgttgggagtgttta
ggtgaggcctacttaaaccgccgcagcttcacagctgctctgaaggccttcggtaaagcc
caccagctccaacccgactccatctacagcgtgtaccaggctgctgctatcaaacagacc
ctgggcaagttcagagaggcggccgcagagtatctgcaggtcacagcgcagcaggactat
gttcctgctcttaaaggtcttggggagtgccagctgtctcttgcaaaaggtttaatggaa
gactgcagagatgggggagccattgacctcattcagcaagccatacagaacctcttcaga
gctgtggagctgcgtccagacctgtcctgtttgtggaagctgctgggagatgcttgcacc
gccgtcagctctgtgtcgccaaacagagctcaagttataatgccagccccactcgctggt
ttagaccccaacacccagagccccacactgaaccaggcccagacactcaaagtgggagag
aggtgtttcgcccgtgctttgcagctgatgtctgcggtgcccagcctttggtatgaccta
ggtctgaactattatcaccagtccagcctgcccggccccacagaggaagaccagaactcc
tcttctctgctcctagagaaggcccagcagtgtttgaaaaaggctatcatgatggacagt
gggaaccataactattggaatgccctgggtgtgatttccatgagcagaggtctggagaac
ttcgctctggctcaacactgcttcatcaagtccatccaagtcgaaccaaataatgtggtt
gcttggaccaaccttggcacgctgtatttgaaaaaagacaatatagagcttgcacacaag
gccttcaagatcgcccaatccctggagccgctttatgtcaactgctggattggacaggcg
ctgatagcagagcaagtgggaagctatgacgccatggatctcttcagacacaccacggag
ctcagcacacatatggagggagtgaaaggttatgcctactgggtatgttccaccctgctg
gataagagcaacagagactcaacgctgtaccgctacaacatagtccaaatgaacgccgtc
tccgctgctcaggtgtctctcagcaagtacacagagaggatccagtccgaccccgatgct
ttcattatgctcggcttcctgaatgagcatctgcagctgaagaggcaggccgtacaggct
tacaaaagagctgttgaacttctccagtccatgtcctccgaagaagcgctggcgtttgct
ctgggcagttacggacgtgctttgtgcacctcagggcagtcggaggaggcggtgcgtgtg
tataactccactcccctgcaggagctcagtgatctgactggcctggctctgtcctactgc
agggagggactcatcccggagagcatcagcgcctatgaacgcgccttggctgtggcctcc
agtgagaaggagaaggcttacatcctgacagctctggcgctgcttcagcaccggcagggg
aacctggactcggccaagactctgctgttcaaatgctcgatgctaaaggagccaatcccg
gagtccctgctctgcctatgtgccctgggattggtccacagcgatgctacgctagctgct
gccgcgctcactgagctgctgaagcaaggtcccgcctctgggagtgtgatagagcagcgc
tgtctgctcacctgctccttgctcgccctgcaggggaactacagcgccgtgcaaagagag
gcttccagggctgtacacagcaatcctggaaacccgtctctgtgggccctgctgtcaaga
ctggtaccacaatactacccgaggaaagcaaacggcggagcgatggctggtcacgttgcc
tgtctctccagtatgacgctaggaaagagagcgttgctgtacagtggagtgaaccagctg
gccaatgggaggcactctggagaggacaaacacaggaatgcactgaagactatgcagaga
gctgtgatgctttgtcctgatgatcctgccacgtgggcgggattaatggctgcctgtcac
acagaaaacacttcctgttacctctcaggttctgctccctgcagacgaggactggagcaa
accctcatgtcagtggtttcagagaaagtgcataatgtggaggagatagagcgcccgctt
gcacagactctggaaggctgggtgctccaacaggcagtgacgggtctcatgctgggagga
cagctggagcaggcagaagccctctgcacacaggtgctgagtgtttctccagagcacccg
gctgtgacgctgtccctaaggcaggtgcagtgtcagcgcctccttttggccggtggtgac
actgtcctcccagactctgtgctggagcaactgaacgccactgtgatgatgaaccccaca
aaccttgggggctggcattggctggccgaggtgtattgtagtcagggtctgctggtgcag
gcggtcatggcctacaggcagagtctgcagatcgcctctcagctcggccttcacagcagc
caggtttccagcctgcttcggctagcactgctggccctgggaccctgtatggcgggtgtc
cctggaaacgactggacaaacatgacagcggaagccactactgaagtgttgaagctgggt
tcctcctctgtggccctccttttccaggccctgttccagtttgtgaccaagatggctgct
agggaaacaaggcgtttgttggagaggctggcgtactctcaggacgtcccggtgacggtg
gtgcaggtggccagctggtacctcctcagacacttgcatagcaaaaacgaccaggagcta
atgaatgtccttttacaacatgccaaaatgaacagagatcagagactgctggagtttcat
tcactgctttcctcttcgtcagcttga
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integrated database retrieval system
