Eleginops maclovinus (Patagonian blennie): 134873482
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Entry
134873482 CDS
T09869
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04137
Mitophagy - animal
emac04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134873482 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134873482 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134873482 (vcp)
03009 Ribosome biogenesis [BR:
emac03009
]
134873482 (vcp)
04131 Membrane trafficking [BR:
emac04131
]
134873482 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134873482 (vcp)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
134873482 (vcp)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
134873482 (vcp)
Membrane trafficking [BR:
emac04131
]
SNARE
SNARE associated proteins
Others
134873482 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134873482 (vcp)
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134873482 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
134873482
NCBI-ProteinID:
XP_063753189
LinkDB
All DBs
Position
12:complement(22306996..22314790)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKSRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNVTWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEEDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGTAGG
SGPTHGSGGTGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggggaatccaaaaatgatgatctagccactgcaattctgaaacagaag
agcagacccaacagactgattgttgatgaatccatcaatgaagacaacagtgtggtctct
ctgtctcagaccaagatggacgagctgcagctgttccgtggagacacagtgctgatgaag
ggtaagaagaggcgggagactgtgtgcattgtgctgtctgacgacacctgctccgatgaa
aaggttcgcatgaacagggtggtccgcaacaatctgagggtcagactgggtgatgtcatc
agcattcagccatgtcccgatgtgaagtatggaaagaggatccacgtgctcccaatcgat
gacacggtagaagggattactggcaacctgtttgaggtctacctgaagccatactttctg
gaggcatacaggccaatccgcaaaggtgatattttcctggtcagaggaggcatgcgtgct
gtggagttcaaggtggtagagaccgacccctctccctactgcattgttgctcctgacact
gtcatccactgtgagggagagccaatcagaagagaggatgaggaagagtccctgaacgag
gtgggctatgatgacattggaggagtgaggaagcagttagctcagatcaaagagatggtg
gagctgcctcttagacaccctgcactgttcaaggccataggagtcaagcccccacgtgga
attctgctgtatggaccccctggaaccggaaagaccttgattgccagagctgtggccaat
gaaactggagctttcttcttcctgatcaatggtcctgagatcatgagtaagctggcagga
gagagcgagagtaacctgaggaaggccttcgaggaggcggaaaagaatgctcctgccatc
atctttattgatgagcttgatgcaatcgctcctaagagagagaagactcacggagaggtg
gagaggcgcattgtttcccagctgctgactcttatggacggcctgaaacaaagggctcat
gtcatcgtcatggctgccaccaacagacccaacagcatcgacccagctctcaggagattc
gggcgttttgatagggaagtggacattggcatccctgacgccaccggcagattggagatc
ctccagattcacaccaaaaacatgaaactggctgacgatgtcgaccttgaacaggttgcc
aatgagacccacggacatgtgggtgctgatctggctgctctgtgctctgaggccgccctg
caggccatcaggaagaagatggacctgatcgacctggaggatgagaccattgatgcagag
gtcatgaactcacttgccgtcactatggatgacttcaagtgggccctgagccagagcaac
ccatcagctctgagggagacggttgttgaggttcccaacgtcacctgggaggacatcgga
ggtctggatgatgtcaagagggagctgcaggagttggtgcagtacccagtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctgttttacggccctcct
ggctgtggtaagactcttctggctaaagccatcgccaatgagtgccaggctaacttcatc
tccatcaaaggacccgagctgctcaccatgtggtttggagagtctgaggccaacgtcaga
gagatcttcgacaaggctcgccaagcagccccatgcgttctcttctttgatgagctggac
tccatagccaaggctcgtggcggcaatgtgggagacggcggcggagcagccgaccgtgtc
atcaaccagatcctgaccgagatggacggtatgtccagcaagaagaacgtcttcatcatc
ggagccacaaacagaccagacatcatcgaccctgccatcctgagacccggccgtctggat
cagctcatctacatccccttgcccgacgagaagagcaggatgagcatcctgaaggccaac
ctccgcaagagccccatcgccaaggatgtggacctggacttcctggcaaaaatgaccaat
ggcttctctggagccgatcttacagaaatctgccagcgggcgtgtaagctggccatcaga
gagagcattgagaatgagatccgcagagagagggagaggcagaccaacccgtcagccatg
gaggtggaagaggaggatcctgtgcccgaaatcaggaaggaccactttgaggaggcaatg
cggtttgctcgtcgctccgtcagtgacaacgacattcgcaaatatgagatgtttgctcag
acactgcagcagagccgtggcttcggcagcttcaggtttccctccggtactgcaggtggc
agtggtccaacccatggctcaggaggaactggcactggcccagtgttcaatgaagacaac
gacgatgacctttacggataa
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