Eleginops maclovinus (Patagonian blennie): 134873567
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Entry
134873567 CDS
T09869
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134873567 (gapvd1)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134873567 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
134873567
NCBI-ProteinID:
XP_063753375
LinkDB
All DBs
Position
12:18322272..18348896
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AA seq
1452 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHNQCVTHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQSAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVDE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMTDNDADPR
RKSSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLVLVDFVR
NVMAGDHLREEEHMALETMVANVPQSRAVKSNSLELTPSNTPQLSPATTPANKKNRLPIA
AARSRSRTNIAQEGEAEASSQESLQELLPEEVLVISLGNGPQSVPGMMSENEVLNLQMAD
GAQGDGHADDTKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAG
PSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGS
DFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPYGSTISETTSEAWSVEVLPSD
SGRDPEAPDLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSVVSGISATSEDIP
NKIEDLRSECSSDFGGKDSVTSPDGEESGHGSHHPTSPPSQADSLLAMFDPLSSCDGSTT
GTIVRPKVHYARPPHPPPDPPIPEASALGPETRHSLFMPHCLAQAELEHTKQRHSFPDRL
VRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPAGAFALGPSSSPSKDSLKGEVEDRKDSD
DEKSDRNRPWWKKRFVSAIPKAPIAAFRKRDKHEKDDVAPERVPQDDTLPRQSSQTQAAE
DILDKYRNIKRISPSDGATGGASYDGTGDLCGDDNVHDSPREDTLQNISTDDLPDSASQT
AQQHDTKFSFSDAKKKLRLALCSADSVALPIMIPVTTRNGLPDHMDSEDNEIVCFLKIQL
AEAINLQDKNQMAQIQETTRCVSRFDARTSRKLMAAIAEDYRKRAPYIAYLTRCRQGLQT
SQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMESKMLDFIKAFQGCTASDDKTAAVE
DFLRYLYGAMARDAIWQYASEDQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLFHE
HIQRLTKVVTANHKALQIPEVYLKEAPWPSAQSEIRTINAYKTPRDKVQCILRMCSTIMN
LLSLANEDSVPGADDFVPVLVFVLIRANPPCLLSTVQYINNFYASRLSGEECYWWMQFTA
AVEFIKTIDDRK
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtacgtg
gcatcagagaagcagctgatccagaggctcaacagtgacgtgctgaagacagccgagagg
ctgtaccgggccgcatggattgccaagcagcaaaggatcaaccttgatcgtcttattctc
accagtgcggaggcctctccagctgaatgctgccaacatgccaaaatgctggaagacacg
cagtttgttgatggctacaagactctgggctttcaagagaccatttatggcgagttcttg
gcccggttgagggaaaaccccagactggtggcttcctgtctggtggcaggggagaggctg
aaccaggagcacaaccagtgtgtcacccatacagtattcacctcactttatggcaactgt
attatgcaggaggatgagagctacctgctacaggtgttgcggtacctggtggagtttgag
ctgaaggaaagtgacaaccctcgccgtttgctgcgacggggaacctgtgccttcagcatc
cttttcaagctcttctccgagggcctgtactcagccaaactcttcctcaccgccactcta
catgaacccattatgcagctgctggttgaagacgaagaccacctcgagaccgacccagcc
aaggtgacggagcgcctcactccggcccagcaggaacgcttcggagagaagggctccgag
ggctacaaacaaagggtgcagtcagcggtggaggccaatgaagctaagctggtagctctg
gtcaacaagtttatcggttacttaaagcagaacacctactgctttccccacagcctgcgc
tggattgtgtcgcagatgtacaagacgttgtcatgtgtggagcgtctggaggtggacgag
gtgcgcaccatgtgtaccgacctgctgctgacctgcttcatctgcccagctatagtcaac
ccggagcagtatggaatcatctcagatgcccccatcaatgaagtagcccgcttcaatcta
atgcaggtggggcagcttctgcagcagttggccatgactgataatgatgcagacccaagg
cgtaaaagcagtttggccaaatttgataagagttgtgtagctgcttttctggatgtggtg
attggtggaagagcagtcgagaccccacccatgtcctcaatgaacctcctagagggcctc
agtaggactgccgtctatattacacataatcagctgcttgtgctggtggactttgtaagg
aacgtgatggcaggggaccaccttcgggaggaggagcacatggctctggagactatggta
gccaatgtgccccagtctcgagctgtgaagagcaacagtctggagctcactccctccaac
actccccagctctccccggctaccactcctgccaacaagaagaacaggctccccatagca
gctgctcgcagtcgcagccgtaccaacatagcccaggagggggaggcagaggccagctcc
caggagtccctgcaggagctgctgccagaggaggtgctggtgatttcacttggaaatggt
cctcagtcggtccctgggatgatgtcagagaatgaggttttgaacctgcagatggctgat
ggggcccagggggatggccatgctgatgatactaagctgcatggtaaaccagacaagacc
ctgcgcttctccctctgcagtgacaacttggaaggcatctcagagggtccttccaacaga
tctaactctgtgtcatctctggacctggagggagagtctgtttccgagctgggagccgga
ccatcagggagcaacggggtggaggcgctacagcttctagagcatgaacaggccaccact
caagacaacctggatgacaaactgcgcaagtttgagatcagagacatgatgggtctcaca
gatgatcgggacatctctgagacggtgagcgaaacctggagcaccgatgtgctcggcagt
gactttgaccccaacatggatgaagatcggctgcaggaaatagcaggggcagctgcggag
aacatgctcggcagcctgctgtgtcttcctggctcggggtcagtgctgctggacccctat
ggctccaccatctccgagaccacaagcgaggcctggagcgtggaagtccttcccagtgac
tcaggtagggatccagaagctccggatttgaaacaggaggagcgtctgcaggagctggag
agctgctcaggggttggcagtacctctgatgacacggaggtcagagaggtcagctcgagg
cccagcacaccaggcctcagtgttgtctcaggcatcagtgcaacctcagaagacatccct
aacaagatcgaggacctgcggtcagagtgcagctcagactttggagggaaggactctgtg
accagtccagatggggaggagtcaggccacggatcacaccatccgacatctccaccctca
caggcagattccttactggccatgttcgatcccctctcctcctgtgacggctccaccact
ggaacaatagtgaggcccaaagtgcactacgccaggccccctcaccctccccccgaccct
cccatccctgaagccagtgccctggggccagagacgcgccactctctcttcatgccccac
tgcctcgcgcaggctgaactggagcacaccaagcagcggcactccttccccgacaggctg
gtacgtagccgcagctctgacatcgtgtgcccaggccgccggcccacaagcgaccctggc
cttaaccggcgggttgcagttgaagagcgtgaccctgctggggccttcgccttaggaccg
tcctcgtcccccagcaaggactccctgaaaggggaggttgaggacaggaaagacagcgac
gacgagaagtctgatcggaacaggccatggtggaagaaacgttttgtgtcagccattccc
aaagctccgatagctgcatttcggaaaagggacaagcatgagaaggatgacgtggccccg
gagcgcgtcccacaagatgacacattgcccagacagagctctcagacgcaggcagctgaa
gatatcctggacaaatacaggaacatcaagaggatcagcccgagtgatggagccacaggt
ggagcttcttacgatggaactggagatctttgtggtgatgacaacgtccacgactctccg
agagaagacaccctgcagaacatttccactgatgacctcccagattcagccagtcagaca
gcccagcagcatgacaccaagttctctttcagtgatgcaaagaagaagttgaggttggct
ttgtgttcagcggactccgtggctctgcccatcatgattcctgtaactacacgaaatggg
ctgcctgaccacatggactcggaagacaatgagatcgtctgcttcctgaagatccagctc
gcagaggccatcaacctccaggataagaaccagatggcccagatccaggagaccacgcgt
tgcgtcagccgctttgacgcacgcaccagcaggaagctgatggctgccatcgcggaggat
tacagaaagagggcaccgtacatagcgtatctaaccaggtgtcgtcagggcctgcagacc
tctcaggcccacctggagagactcctccagagggtgctgagagacaaggaggtggctaac
cgctacttcaccaccgtctgtgttcgcctccttctcgaacacatggagtccaagatgctt
gacttcattaaagcgttccaggggtgcacggcatcggatgacaagaccgcagcagtggag
gattttctgcgctacttgtacggcgccatggcccgtgatgccatttggcagtacgcgagc
gaggaccagctgcaggatgcccagatggctatcgagcgcagcgttatgaaccgcatcttc
aaattggccttctaccccaaccaggatggagatattctcagagaccagcttttccatgaa
catatccagcggctcacaaaagttgtgacggccaatcataaagctctacaaatcccagag
gtttacctgaaggaggctccctggccctccgcccagtctgagatcaggaccatcaacgca
tacaagacgcctcgagacaaagtccagtgtatactgcgcatgtgttccaccatcatgaac
ctcctcagtctggccaacgaggactccgtccccggagcagatgactttgtccctgtgctt
gtcttcgtcctcataagggcaaacccgccctgcctgctgtccaccgttcagtacatcaat
aatttctatgccagccggctgagtggggaggagtgctattggtggatgcagttcaccgcg
gcggtggaattcattaagaccatcgacgatcgcaagtga
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