KEGG   Eleginops maclovinus (Patagonian blennie): 134873582
Entry
134873582         CDS       T09869                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Pathway
emac03420  Nucleotide excision repair
emac04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:emac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134873582 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134873582 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:emac04121]
    134873582 (ercc8)
   03400 DNA repair and recombination proteins [BR:emac03400]
    134873582 (ercc8)
Ubiquitin system [BR:emac04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     134873582 (ercc8)
DNA repair and recombination proteins [BR:emac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      134873582 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_IFT122_1st WD40_RFWD3 WD_LRWD1 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 134873582
NCBI-ProteinID: XP_063753405
LinkDB
Position
12:14816513..14828276
AA seq 401 aa
MLGFLTARQAGVDDPLRLRRAESTRRVLSLKLNPDRDVDRVHGNGINTIDIDAVEGRYML
SGGADGVIVIYDLENYSRKQQYSCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDSETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKDPKIQLCDLKSGSRIH
VLQGHRSEILSVRWSPRYDHILATASADSKVKVWDVRQASGSLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSVAVYALHTGELVTTLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVPRASDVEEESKSANQAAADQSSVNPAFQDAWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttggggtttctcacagccaggcaggctggtgtggatgatcctctgcgattgaggcgt
gctgagtcaacgcggagggtcctgagtctgaagttgaatcctgacagagatgttgataga
gtccatggaaatggcatcaacaccattgacattgacgcagtagaaggcagatacatgttg
tctggcggcgcagatggagtgattgtcatctatgacctggaaaactacagtaggaaacaa
cagtacagctgcaaggcagtttgcacagtaggcagatcgagtcgatatgtccacaaattc
agcgtagagacagtccagtggtatccgtatgacaccggcatgtttgtctcaagttccttt
gacaagacaatgaaggtctgggactctgagacactgaagcctgctgaagtctttgagttt
gagggcaatgtctacagccaccacctatcccccatcgccaggaagcacagtctcattgca
gttggcaccaaagaccctaaaatccagctgtgtgacctgaagtctggttcacggattcat
gttcttcagggtcacagatcagagatcctgtctgtgcggtggtcgccccgatatgatcac
atcttagccactgccagtgcagacagcaaagtgaaagtatgggatgtgcgtcaggcttcc
ggtagtctcttcactctggaccaacacaatggagacaaatcaaaagcctcgtctgaggca
gtgaacacggctcataatggtagagtgaacggcctgtgcttcactggcgatggcctctac
ctcctcaccactggaactgatgaccgtatgcgactatggaatagtgccactggggaaaac
acactggtaaattacgggaaggtctgcaacgagagtcgtaaaagactacaattcacagtg
tcacgtggctgcagcccagagtttgtgtttgtgccatgcggcagctcagtggctgtgtat
gccctacacacgggagagctggtcactacgctcagaggtcactacaacaatgtcgactgc
tgcgagtttcacccagactaccaggagctctatagtggaggtaaagactgtaacatcctg
gcgtgggttcctgtccctcgtgcctcagatgtggaagaagagtcaaaaagtgcaaatcag
gctgctgcggaccagtcctcggtgaaccctgcctttcaggatgcatggagtagtgatgaa
gactaa

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