Eleginops maclovinus (Patagonian blennie): 134873628
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Entry
134873628 CDS
T09869
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134873628 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134873628 (usp39)
Spliceosome [BR:
emac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
134873628 (usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
134873628
NCBI-ProteinID:
XP_063753484
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Position
12:complement(23545700..23551196)
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AA seq
502 aa
AA seq
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MIVSLKREREPEFDEDDDDEDRVEAKVGRGRSAEDRRSRHCPYLDTINRSVLDFDFEKLC
SISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDS
SLEDITYVLKPTFTKQHIGGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFS
NVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVV
LCSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKTSIITKAFQGSMRIFSKKLPHPDL
TPEEKEALLVTDEYQEQMSEANFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGS
TEKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLT
EEAQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLS
EAYIQIWKRQESDTDTTNHTAV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatagtttctttgaagcgagaaagagagcctgagttcgacgaggatgatgacgacgaa
gacagagtggaagccaaagtaggccgaggacggtcagcagaagaccggaggagccgccat
tgtccttacctcgacaccataaacaggagtgtgctggactttgactttgagaaactgtgc
tccatatccctctcccacatcaatgtatacgcctgccttatatgtgggaaatactttcaa
ggtagaggtttgaagtctcatgcctacacgcacagtgtgcagtttacccatcatgtgttc
ctgaatctgcacactctcaagttttactgtctgcctgacaactatgagatcattgactct
tcactagaagacatcacgtatgtgctgaaaccaactttcaccaagcagcacattggaggg
ctggacaagcagggtaaactgtaccgagcctatgatggtacaacctacctgcctggcatt
gtaggtctcaacaacatcaaagccaacgactacgccaacgtggtgttacaggctttttcc
aatgttccaccattgcgaaactacttcctggaagaggaaaactacagggggatccgcagg
ccaccgggggacatcatgttcctcctggtgcagaggtttggtgagctaatgcgcaaactc
tggaatccgagaaacttcaaggctcacgtctctccacatgagatgctgcaagctgttgtg
ctgtgcagcaagaagaactttcaaatcaccaaacaaggggatgctgtggacttcatgacg
tggttcttgaatgccctgcatggtgctctgggaggcacaaagaaaaaaacatcaatcatc
acaaaagcgtttcaaggctccatgcggatcttttcaaagaaacttccacacccagattta
acaccagaagagaaagaggcattgcttgtgacagacgagtaccaggagcagatgtcggag
gccaacttcctgtttctaaccctcgacctcccaacagctccactgtacaaggatgagaag
gagcagcttattatcccacaggtccccctcttcaacatcctggggaagttcaatggcagc
acagagaaggagtacaaaacctacaaagagaatttcctcaaaaggttccagttgaccaaa
ctgcctccgtacctcgtcttttgcatcaaaagattcaccaagaacaacttctttgtggaa
aagaaccctacaatcgtcaacttccccatcacgaacgtagaccttcgtgagtacttgaca
gaggaagctcaagtgacagagaaaaacacaacttatgacctcgtcgccaacgtggtgcat
gatgggaaacctactgagggagcatacagaatacatgttctacatcatggtactgggaag
tggtatgagatgcaggacctgcaggtgaccgacattctcccccagatgatcacactgtcc
gaggcctacatccagatctggaagagacaggagagtgacactgacacaacgaaccacacg
gcggtgtaa
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