Eleginops maclovinus (Patagonian blennie): 134873726
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Entry
134873726 CDS
T09869
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04142
Lysosome
emac04144
Endocytosis
emac05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134873726 (cltcl1)
04142 Lysosome
134873726 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134873726 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134873726 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134873726 (cltcl1)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
134873726 (cltcl1)
Exosome [BR:
emac04147
]
Exosomal proteins
Proteins found in most exosomes
134873726 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
LVIVD
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
134873726
NCBI-ProteinID:
XP_063753602
LinkDB
All DBs
Position
12:complement(12202821..12227336)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGDQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTVA
LVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKASTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRIAVRSNLAGA
EEIFARKFNTLFAQGSYSESAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHDGCEEPATHNALAKIYIDSNNTPERFLKENTFY
DSAVVGKYCEKRDPHLACVAYERGECDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINKLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYDEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAAITMMS
HATDAWKEVPFKDIIAKVANVELYYKSLSFYLEYKPLLINDLLVILSPRLDHSRAVNFFS
KMNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDFQGLRASIDAYDNFDTIELAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRNNIMDFSMPYFIQVMREYMTKVDEFAVKVMVD
KLEEADSQRKTEEEVTEPQPIVFGQQLMLPASPAPVAAQPAYPGYGYPAAPAGFPAQPAY
GFNM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatactgccgatacgatttcaggaacatctgcagctgcagaacatgggtgtg
aacccggccaacatcgggttcagctatctgaccatggagtcagacaagttcatctgcatc
agagagaaggtgggcgatcagaaccaggtggtgattgtggacatgtccgaccctaccaac
cccatcaggagacccatctctgctgacagcgccatcatgaaccccgccagcaaggtcatc
gccttgaaagctgccaagacgctgcaaatcttcaacatcgagatgaagagtaaggtgaag
gctcacaccatgacggaggaggtcatgttctggaagtggatatcggtaaacaccgttgcc
ttggtgacagatacggctgtctatcactggagcatggagggggattcccagcccaccaaa
gtattcgatcggcacgccagtctggccggatgtcagatcatcaactatagaactgatgaa
caacagaaatggctactgctgatagggatttctgcacagcaaaaccgtgtggtaggggcg
atgcagctctattctgttgacagaaaagtttcccagcccattgagggccacgctgcagcc
tttggggagttcaaagtggaaggaaatgccaaagcatccaccctcttctgctttgctgtg
cgctcacaggctgggggaaagttgcacatcattgaagttggtcagccagctgcaggaaac
cagccatttgcaaagaaagcagtggacgtgttcttccctccagaggcccagacagatttt
cctgtcgctatgcagattggcaacaagcatggtgtaatatatttgatcacaaagtatggg
tacattcacctatatgacctggagtctggagtgtgcatctacatgaaccgaatcagtgca
gagaccatctttgttaccgcccctcatgaagccacctcaggaattattggggtcaacaag
aagggacaggtgttgtcagtttgtgttgaagaggaaaacattgtcaactatgccaccaac
gtcctgcagaatccggatctagccttgaggattgctgtgaggtcaaaccttgccggggcc
gaggagatttttgccaggaagttcaatactctgtttgcacagggaagttattcagagtct
gcaaaggttgccgcatcagcacccaagggtatcctgcggacagcagagaccatccgtaag
tttcagagtgtcccggcccagccagggcaggcctctccactgttgcagtactttggtatt
ctgttggaccaaggccagctgaacaagtttgagtctctggaactgtgcaggcctgtcctg
cagcagggccgcaaacagctgctggagaaatggctaaaggaggacaagcttgagtgctca
gaggagctgggagacctggtgaaggcctctgaccccacccttgctctcagtgtgtacctc
agagctaacgtccccaacaaggtcatccagtgctttgctgagactggacagttccagaag
atagtgttgtatgctaaaaaggtgggctacaccccagactgggtgtttctactgagaaat
gtgatgcgtgtcaatccagaccagggactgcagttcgcacagatgctggtgcaggatgag
gagccactggccaacatcaaccagatcgtagatgtgttcatggagggcaacctgatccag
cagtgcacctccttcctgttggatgcactaaagaacaaccgcccggctgaaggacactta
cagacacgcctgcttgagatgaacctcatacatgctccccaggtagcagatgcgatcctg
gggaaccagatgtttacccactatgatcgtgcccacgttgctcagctgtgtgagaaggca
ggacttctgcagagggctcttgaacactacacagacctgtatgatatcaaacgggccgtt
gtgcacacacatctgctcaaccctgagtggctggtgaacttctttggatctttatcagtt
gaagactccctggagtgtttaagggccatgttgtcggctaacatcaggcagaacctgcag
ctgtgtgtccaggtagcatctaagtatcatgagcagctcgggacccaggccttagtggag
ctctttgaatccttcaagagttatgagggcttgttttacttccttgggtcgattgtgaat
tttagccaagagcctgatgttcattttaagtacatccaggctgcctgcaaaacaggccag
atcaaagaagtggagagaatctgtagagagagcaactgctatgacccggagagggttaaa
aacttcctcaaggaggccaagctaacagaccagcttccccttatcattgtgtgtgatcgc
tttgacttcgtccatgacctggtgctctacctctaccgcaacaccctgcagaaatacatt
gaaatctacgtacagaaagtgaatcccagtcgtttaccggtggtgataggcggcctgttg
gatgtggactgtgctgaggatgtcattaagaacctgatcatggtggtcagagggcagttt
tccactgatgagctggtggaggaagtagagaagaggaaccggttaaaacttctattgcct
tggctggagtcccgcattcatgatggatgcgaggagccagctacccacaatgccctggcc
aagatctacattgacagcaacaacacgcctgagcgcttcctgaaggagaacacgttctac
gacagcgccgtggtcggaaaatactgcgagaagagagacccccacctggcctgtgtagcg
tatgagagaggagagtgtgacctggacctcatcaaagtgtgcaacgagaactccttattc
aaaagcgaggctcgatatctggtgcgaaggaaagatcccgagctctgggcgaacgttttg
gaggaaaacaaccccttcagaagacagctgatcgaccaggtggtgcagacagcactgtca
gagacccaggacccggaggaggtgtcggtcactgttaaggccttcatgacggcagacctg
cccaacgagctgattgaacttctggagaagattgttcttgataactctgtcttcagtgag
cacagaaatctccagaacctgctcattttgacggccatcaaagccgaccgcactcgtgtg
atggagtacatcaacaagcttgacaactacgacgctccagacattgctaatattgccatc
agcaatgagctctttgaggaagcatttgctattttcaagaaatttgatgtcaatacatca
gctatacaggtattgatagagcacatagggaacctggatcgtgcctatgagtttgccgag
cgctgtaatgagccagcggtgtggagccagttagccagagctcagttgcagagagacctg
gtgaaggaggccattgactcgtatatcaaagccgttgacccttcagcatacatggaggtg
gtcaacgcagccagcaagaacaataactgggaagacttggtcaaattcctccagatggct
cgaaagaaagcgagagagtcttacgttgagacggagctgatctttgctttagctaaaaca
aaccgtttggcagagctggaggagtttgtcagtgggcccaacaatgctcacatacagcaa
gttggcgatagatgttatgatgagggtatgtatgacgcagccaagctcttgtacaataac
gtttccaacttcgctcgcctcgcatcgacgcttgtccacctcggggagtaccaggcggct
gtggacagtgccaggaaagccaacagcacacggacatggaaggaggtgtgttttgcgtgt
gtggatggcgaggagttccggctggcacaaatctgcggccttcacattgtcatccacgcc
gatgagctggaggacctgatcagctactatcaggaccgcggctactttgaggagctcatt
gctctgctggaggctgcgctgggcctggagcgtgcccacatgggcatgttcactgaactc
gccatcctctactcaaagttcaaacctcagaagatgagggaacatcttgagcttttctgg
tccagagtcaacatcccaaaggttcttcgtgcagcagagcaggctcatctatgggcagag
ctggtgttcctttacgataaatatgaggagtttgacaatgcagccatcacaatgatgtct
catgccacagatgcgtggaaagaagtgccgttcaaggacattattgcgaaggttgccaat
gttgagctgtactataaatctctttccttttacctggaatacaaacctctcctgattaat
gacctgctggtcatcctgtctccacggctggaccacagccgagctgtcaactttttcagc
aagatgaaccagctgaagttggtcaagccttacctgaggtccgtccagaatcacaacaac
aagtccgtcaatgaagccctcaacaatctgctgacagaggaggaagacttccagggcctg
agagcatccattgatgcctatgataactttgacaccattgagctggcgcagaggttagag
aaacatgagctgatcgagttcaggcgcatcgctgcgtacctatacaaaggcaacaaccgc
tggagacagagtgtggagctctgcaagaaggacaaactctacaaggatgccatgctgtac
gccgcagagtctaaggacgcagagctggcagagactctgctccagtggttcctggaggag
ggcagaaaggagtgctttgcagcctgcctgttcgcctcctatgaccttctgcacccggac
gtggtgctggagctggcctggaggaacaacatcatggacttttccatgccgtacttcatc
caagtcatgagagagtacatgacaaaggttgatgagtttgcagtgaaggtgatggtggac
aaactggaggaggcagacagccaaaggaaaaccgaagaggaggtgacagaacctcagccc
atagtgttcggtcagcaactgatgttaccggcttctcctgctccagtggctgcccagcca
gcgtacccaggctacggctaccctgctgcccctgcgggcttccctgctcagcctgcctac
ggcttcaacatgtag
DBGET
integrated database retrieval system
