Eleginops maclovinus (Patagonian blennie): 134874082
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Entry
134874082 CDS
T09869
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134874082 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emac03400
]
134874082 (polb)
Enzymes [BR:
emac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134874082 (polb)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
134874082 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
134874082 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
134874082
NCBI-ProteinID:
XP_063754146
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All DBs
Position
12:12280740..12285960
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AA seq
336 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYTNKIRNGEEAK
KLEGVGPKIAEKIDEFLQTGTLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQVGLRYFEEFEKRIPRAEMEQMETFIIEELKKLDPEYIGTICGS
YRRGAASSGDIDILLTHPDYTSETEKQPKLLHAVVEHFESIGFVTDTLSKGDTKYMGVSQ
IQKSDEEEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKTMRTHALEKGFTLNEYTIR
PLGVTGVAGEPLLVDSERDIFEYIHYKYREPKERSQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaggaaagcgccacaggaatccccaaatgagggaattacagactttcttgtt
gagctggccaactatgagaaaaacgtcaacagggctatacacaagtacaatgcatacagg
aaagcagcatcaaccatttctaagtacactaacaaaatcagaaatggcgaagaggccaag
aaactggaaggtgttggacctaaaatagcagaaaagattgacgagttccttcaaactggc
acactacggaaactggaaaagattcgtaacgatgacaccagctcttccattaatttcctt
accagagtgactggaattggccctgctgctgccaggaagttctttgaagaaggagtgaag
accttagaagatttgaaaaagattgagcacaagcttaaccatcatcaacaggtcggactc
aggtactttgaggaatttgagaaaaggattccacgtgctgaaatggaacagatggagact
tttattattgaggaattgaagaagctcgatccagaatacattgggacgatctgtggaagc
tacaggagaggtgcagcatcaagtggtgatattgatatcttgctgacccacccagactac
acctctgagactgagaagcagcctaagctccttcatgccgtggtcgaacatttcgagtcc
attgggttcgtgaccgacactctgtccaaaggagacaccaagtacatgggagtcagccag
attcagaagagcgacgaagaggaggaggaataccttcacaggcgtattgatatcaggtta
attcccaaggaccagtactactgcggagttctgtacttcactggaagtgatatcttcaat
aaaaccatgagaactcatgctctggagaaaggcttcactctcaatgagtacaccatacgg
cctcttggagtcactggtgtggcaggggagcctctgttggtggatagtgagagagacatc
tttgaatacatccactacaaatacagagagccaaaggagcgcagccagtga
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