Eleginops maclovinus (Patagonian blennie): 134874121
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Entry
134874121 CDS
T09869
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134874121 (vps13a)
Membrane trafficking [BR:
emac04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
134874121 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
134874121
NCBI-ProteinID:
XP_063754200
LinkDB
All DBs
Position
12:complement(16862041..16897949)
Genome browser
AA seq
3266 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKLKAAEQENPDIEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTCDEKWNPRLLDENSRLFFKLVQLDNLFAYWNVNSLLFSNHNAEEALQCLQSSID
ANNSLSISHDFIFRPISAAAKLRMNPRSDVDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDLMSRNLPYRKYRPEVQVHKNACIWWKYMITSVLEVDVKPRLHMWSWQHIRSHRQ
TIKYYRELYKTKITCKKPSEDLLKALQRPEKTLDIFNITLARQQAEVEASKAGLRIYRPG
LKMEEEESQGWLNWMWNWGGEAETETKELKTGGFDELLTSAEKAKLYTAIGYSDTVANPN
LPKNFEDMKVNFHMERLSVSIKDNQDKDEIIRLTVGELKSTLTQRPGAQAIKITAQLSLF
EVTGLASNRPAPTLLSSRKAATGAGTPLLCILFETNPLDNSANQRLHVESQPLEIIYDAI
TVNGMSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKVLDLKVNLMASYV
IIPQTGFYNGTQNLLLLDLGHFQMSSQSKKNLPQLSVCTSNIKDIISRAYDSFDIQLTNL
QFLYSKPDGDWKMARKQKQSPLHILEPVDLTVVFSRAMVVKDSRMAKYKLYGELRLLSLR
ISDVKLRNVLELVDSIPLPESKPAANSSAKPKQSFTPQLTPRRPLNLADQRSSLMFESCE
TISITSLGSEEDLFYDAPSSPVGDRPFFPDNPMPLRYAHSNRSKSSEAQKNMTDLSLKFE
INQFSVQLCRLSGDQEVTVLHLDIEVLGTELTLRTFDMTSNTYLREICLKCPEYMDSEER
QVQLITTLDNSEVDLLTLDYIKADRNGPEFKSQHNNTEQLIKVTFSSLDVHLHTEALLNT
MNFLNNLLPPSTKKEGVQEDLPTIPEEEEAEKEEEKKEETTVMKKKSTKPSKFADVVNLH
IRADLRCLKVFIRGQKARISEISIEGLVSEVLMRKKGMEVLANLKNIVILDCDKDALYKK
AVSIADEEVFAFRMVNYTDATEGDAYLDMSNVDTAVTLTVGCIQVIFLNKFVSSILAFIN
NFQEAKEALAEVTVQAREKAASGVKELAERSTRIALNVHFNAPVIFLPQSSSSSNVIVAD
LGLLSVKNRFAKQPSKSDAKIPPVVDIMTVRLTDLKMYRTTYIDGGFQGETQLLMPVSLD
LEVQRNLSSNWYHGIPDIEITAHLKPIGLILSQDDMTVVLRTLSENLSEKSDAVPPPALP
PTPDQSSDTVSNKESMGSGTTGPASSNTVVTAAVVEPSKSSKLKSTLKLDFKFDSMTLVL
YSPNGNTMLTLDSHDDQLKLAEFTLGTISTSVHMYSDSSMKALVRLAACLLDDKRPRIKM
VTPRMIAMRPGSEQNMMVEVNYRQGRDGTTLDTVVQDVYLCASMEFLLTVADIFLKATQQ
GFAQAPQPKTSSGVGERKNINSSTTSKESTVAPAVVSKTEMNVVVRNPEIVFVADLTRAD
APALVMTTQCELVMKSGAEGSQMTAVIRELKVVACPFLREKRKHNVTTVLQPCQVFFKSS
QSLNSAQAMEVSISALTLKVSPIIINTVMTIQSALTPTAETPEELVSPVPVNLWEKRGWK
ELKFWFLEEEGDEYPKSLTPLIPTGESLQVAIKSICMTLEAGVGHRTIPMLLIKSSFHGD
VTNWSTLINLHSALNLEVHYYNEVLGVWEPLLEPLEDEKDSFKAWTLELKMKKKPVNYTG
SDEVDFNVPDYKTVIVVSSKDQLNITLSKCGLAMLSNLGTAFAEAAKQTADSFQKDEAPF
IVKNRLGLPVSVRHSEMFCPIGQQSTNRTVELQDGQTLGMDYFTTTDTDQFSAMISLSGK
EYYIEPTPMGHTSASVIPLIKVGQGMYSVMHKDSGVTRFLVCQIYTVEGSKYVKIRSPFQ
IINHFSIPFKVFEGTTCLGQALPTEEFCVPLDSYRSELSLQPITEDDTNDQEEQYECSEG
FSYEDVNNHEPDTRLQQTCRQRGDQGGVLMVNMVPSRDAVTFKHTGLVGENFDVPFVLHL
WPSILLRNLLPYPISYQLKDSGVSAPEATLNQGHSAQLHTAVINQSSLNLCLLNYLDQDW
SSEYSLNSDQEEITFIVFQSLREYGEEDGEDTERKRPELDIAVHVEYNQGQTVVAIHSPY
WMMNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMISDSELSDDFSLD
TVGSYGDVKCKGRYKDYLVGVKIDASSFSLTRIVTFVPFYMLVNRTKHSVFICEERQDNW
TEAKPLQSAIPFWPENDAKRLKIKVEGCLLPPRTIDFTRQENCLLLHLDNSVGGITVDVN
LSEHSATIRFSEYHDGAAPFLIINNTKDQTLQFHQSARKQSWVADELLDLSFSVEEDSSQ
AEAEHEVLDAGKAVHYTWTEPTGSRELCWKCGTYSGKLKSEEDLREDMNNKGKLFVISFY
EGLQRVVLFTEEEHIYKLLCENEKAQLAEQEINLSLQNVGVSLVNNNSGQEVSFIGITSS
DVVWELKPKKKSRWKTMSTKEAEMLEISYKEYMDSGPVDHAIVDLENNFQVSFTPNGMDM
RMMQPCDAPLRRSFLPGVKVEYSISPRQRAYRVQIHRIQIQNQLPGAIFPYVFYPVKLPK
SITMDAEPKPLTDISIVTRAAGHSDISRIKYFKVLIQEMDLKLDLGFLYAILDLFTPENA
SIMSSQQEVELFEKDIEYIKTELNHVSAADTSPISLYEYFHISPIKLHLSFSLSTGGEDG
MKEKRDKELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELTFRFCTTQQLQWEVIRHYS
KQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKAL
VGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRRETMNKQPSGLREGLTRGGKGLVS
GFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRAAE
TSQDIASLRPPRFIHEDGVIRPYKEREGIGSQMLQKIENGRFAKYRYFAHAKVNDSDFFM
ITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEDRRLRIEAKERVKSVFHAKEFGKI
INFKTPEIATWVLARLDDARESLQKY
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcttggtggtagatgtcctcaatcgatttttaggggactacgttgtc
aaccttgacagctcacagctaaagcttggcatatggggaggtgatgctgttcttagaaat
cttgaaataaaggaaaatgccttgagtcaacttgacattccttttaaagtgagagccggt
catataggacggcttgagctgaagatcccatggaagaacctgtacacacagtctgtagag
gctacactggatggggtgtatctgcttatagtccccacagcgagtataaagtatgatgca
gaaaaggaggagaagcagctacaggaagctcgtcagagggagctacagcggatagaggag
acaaagctgaaggctgctgaacaagagaatccagatattgaaaaacaggacacgtttgta
gagaagcttgtaactcaggtcatcaaaaacctgcaagttaagatctctaacatccacgta
cgctatgaagatgatgtcaccaatccaaactgtcctttgtcatttggagtgtcacttaaa
aacctcagccttcagacatgtgatgagaaatggaatccaagactgttggatgagaattcc
cgacttttcttcaagttggttcaactagacaacttgtttgcctactggaatgtcaactct
ttactcttctccaatcacaatgcagaggaagccttgcaatgtctgcagagcagcatcgat
gcaaacaactctctttccatcagccatgacttcatttttcgtcccatctcagcggccgct
aaactgcggatgaatcccaggtcggatgtggacttttcctctcccaaagtggacctgatg
gtcaatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcctggag
ctgctgggatcagtggatttgatgtcccgcaatctgccgtacaggaagtacagacctgag
gtccaggttcacaaaaatgcctgcatatggtggaagtacatgatcacaagcgtcctagag
gtggatgtaaagcctcgtctccacatgtggtcctggcagcacattcgcagtcaccggcag
acgatcaagtattacagagagctgtacaagaccaaaatcacctgcaaaaaacccagcgag
gacctgctcaaggcactacagaggcctgagaagaccttggatatttttaacatcacgttg
gccagacagcaggctgaggtggaggcaagcaaagcaggtctacggatttaccgtccaggg
ctaaagatggaggaggaggagtctcagggttggttgaactggatgtggaattggggagga
gaggccgaaacagaaacaaaagagctcaagactggaggttttgatgagctgttaacttct
gctgagaaagccaaactctacactgccattggatacagtgataccgttgcaaatcccaac
ctgccaaagaattttgaggacatgaaggtcaatttccacatggagaggctgtctgtgtcc
atcaaagacaaccaggacaaagatgagatcatcaggctgactgtgggggagctcaagtcc
acactcactcagagacctggagcacaagccatcaaaatcacagcccagcttagtttgttc
gaagtcaccggcctggccagtaaccggcccgcaccaacactcctgtcctcaaggaaggct
gccacaggagcggggaccccgctgctctgcatcctgtttgagaccaacccgctggataac
agcgctaaccaacggcttcatgtggaatcacaacccttggagatcatctatgacgctata
acagtgaacggcatgtcagcgttcttcatgccccctgatgacctgcagctggatgagctc
accaacgcaaccctcatgaaactggagcagtttagagaccgcactgccaccggtctgatg
tatgtgatcgaaacacagaaggttttggacttgaaggtgaacctgatggcctcctatgtc
atcattccacagaccggcttttacaacggcactcagaacctcctactgttggatcttgga
catttccagatgtccagtcaaagcaagaagaatctgccacagctgtcagtttgcaccagc
aacatcaaggacatcatttccagagcatacgacagctttgacatacagcttactaacctg
cagttcctttatagcaaaccagatggggactggaaaatggctcgcaagcagaaacagtca
ccactgcacattctagagccggtggatctaacagtggtattcagcagggcgatggtcgtc
aaagactcccgcatggcaaagtacaagttgtacggcgagctccgcctgctgtcgcttcgt
atatctgatgttaaacttcgaaatgttctggagctggttgacagtatcccgctccctgag
agcaaacctgcagcaaacagctctgcaaagccaaagcagtctttcaccccacaactcact
cccagaagacctctgaacttagccgaccagcgctcctctctcatgttcgagtcatgtgaa
accatcagcatcacctcgttgggttcagaggaagatttgttttacgatgctcccagctct
cctgtcggggatcgaccattcttcccagataatccgatgccgctgcgctacgcacactca
aacagaagtaaaagttcagaagctcagaagaacatgactgacctctccttgaaatttgaa
atcaatcagttttctgttcagttgtgtcgactttctggagatcaggaggtcacggtgctt
cacttggacatagaggttctgggcactgaactgacactacgcacctttgacatgacctct
aacacctacctacgggaaatctgcctcaagtgccctgaatacatggattctgaagagagg
caggttcagctcatcaccactctggataactcagaggtggacctgctcaccctggattac
attaaagctgataggaatggccctgagttcaagtcccaacacaacaacacagagcagctc
atcaaggtgaccttctcctccctggatgttcatctacatacagaggctctcctcaacacc
atgaacttcctcaacaacctcctccctccatccacgaaaaaagagggagtgcaggaggat
ctccccaccattcctgaggaagaagaggcagagaaggaagaagagaagaaggaagaaact
actgttatgaagaaaaaaagtacaaagccttccaagtttgcagatgtggtgaacttgcat
atcagagctgatctccgctgtctgaaggttttcattcggggacagaaagccaggatctct
gagattagtattgaaggtctggtttctgaggttctgatgaggaaaaagggaatggaggtt
ctggccaacctgaaaaacattgtgatcctagactgcgacaaagatgcactttacaagaag
gctgtgtctatagcagatgaggaagtgtttgcgttccgtatggtaaactatacggacgca
acagaaggagacgcctatctggacatgtctaatgttgacactgccgtcacgctgactgtg
ggatgcatccaggtcatcttcctcaacaagtttgtgtcctccattctggcattcattaat
aacttccaggaggctaaagaggctctggctgaggtgacagtccaggccagagaaaaagca
gcgtcaggtgtgaaggagctagccgagcgcagcactcgtatcgctctgaacgtccacttc
aacgcaccggtcatcttcctgcctcagtcctcctcttcctccaatgtcattgtagctgac
cttggactgctgtctgtcaagaaccgctttgccaagcagccctctaaaagtgatgccaag
atcccacctgttgtggatataatgaccgtgaggctgactgacctcaagatgtacaggacg
acatatatagatgggggtttccagggagagacccagctgttaatgccagtcagcttggac
ttagaagtgcaaagaaatctttcatccaactggtaccacggcatacctgacatagagatc
accgctcatctaaaacccatcggtctgatcctcagccaggatgacatgacggtggtcctg
aggactctgagtgagaacctgtcagagaagtctgatgctgttccacctccagctcttcca
cccacccctgatcaatcctccgacactgtatctaacaaagagtccatgggctctggaacc
accggaccagcaagcagcaacacagttgtgacggctgctgttgtcgagcccagcaaaagc
agcaaactgaagagcacgctcaaactagacttcaagttcgactcaatgacccttgtcttg
tatagccctaatgggaatacgatgcttacgctagattcacatgatgatcagctgaagttg
gcagagtttactctgggcaccatctccacctccgtccacatgtactccgacagctccatg
aaggccttagtacgactggctgcgtgccttctagatgacaagagacccagaatcaagatg
gtcaccccgaggatgattgcaatgcgtcctggttcagaacagaacatgatggtggaggtg
aactaccgtcagggccgtgacggcaccactctggacacggtggtgcaggacgtgtacctg
tgtgccagcatggagttccttctcacggtggcagacatctttctcaaggccacccagcaa
gggttcgctcaagcgccacaacccaagaccagttctggagtcggagagagaaagaatata
aactcctctaccacatctaaagagtccactgtcgctccagctgtggtttcaaagaccgag
atgaatgttgtggtgcgcaacccggagattgtgtttgtggctgacctgacacgcgctgac
gctccagccctggtgatgaccacgcagtgtgaactagtgatgaaaagtggtgcagaggga
tcacagatgacagctgttataagggaactcaaggtagtggcgtgtccattcttgagagag
aagaggaaacacaacgtgacgacggtgctgcagccgtgtcaggtgttcttcaagagttct
caatccctcaactccgctcaggctatggaggtctccatcagtgctttaacattaaaggta
tctccaatcatcatcaacacagtgatgaccatccagtctgcgctgactcccacagcggag
acccccgaggagctggtcagccctgtccctgtgaacctgtgggagaaacggggctggaag
gagctaaaattttggttcctagaagaagaaggggatgaatacccaaagtcactgacgcca
ctgataccaacgggagagtcattacaggtggccatcaaatcgatctgtatgactctggag
gctggagtgggacaccgcactatccccatgcttctgatcaagtcctccttccatggagac
gtgacaaactggtccacacttatcaacttacacagcgcgctcaacctggaggttcactat
tacaacgaggtgctgggagtgtgggaaccgctgctggagcccttagaagacgagaaagac
agttttaaagcatggacacttgaactgaagatgaagaagaagccagtgaactacacaggt
tcagacgaggtggattttaatgtcccagactataagacagtcattgttgtcagcagtaaa
gaccagctcaacatcaccctctccaaatgtgggctggccatgttgagtaacttgggcacg
gcatttgcagaggctgccaaacagacggctgactccttccagaaggatgaagctcccttc
atagtgaagaaccgcctcggcctgccagtgtccgtccgccacagtgagatgttttgtccc
atcggccagcagagcaccaaccgcacggtggagctgcaggatgggcaaacgctcgggatg
gactatttcaccacaacagacacagaccagttctcagctatgatttccttgagtggaaaa
gagtattatatagagcccactcctatgggtcacacctcagccagcgtgatccccctgatc
aaggtgggccaggggatgtacagcgtgatgcacaaagactcaggagtcactcgtttcctg
gtctgtcagatttacactgtggagggcagcaagtacgtcaagatccgctctccattccag
atcatcaatcatttctcaatcccattcaaagtttttgagggaacaacatgtctgggtcaa
gctctccctactgaagagttctgtgtgcctttggactcatataggtctgagctgagtctt
cagccgataacagaggacgacaccaacgatcaggaggagcagtatgagtgctcagagggt
ttcagctacgaagacgtcaacaaccatgagcctgacacgcgcctgcagcagacctgccgt
caacgtggagatcagggcggtgttctgatggtcaacatggtgccatcgagagatgctgtg
acattcaaacacactggacttgttggggagaacttcgatgttccctttgtgcttcatctg
tggccttccatcctgctgcgcaacctgctgccttaccccatctcttaccaactgaaggac
agtggtgtctctgcccctgaggccactctgaaccagggccactctgcccagcttcacact
gcggtcatcaaccaatcaagtctcaatctgtgcctactgaactacttggatcaggactgg
tcttctgagtacagtctcaacagtgaccaggaagagattaccttcatagtgttccagtct
ctacgagagtatggcgaagaggatggtgaagatacggagaggaagagacctgagttggac
atagcagtgcatgttgaatataaccagggacaaacggtggtggctatccactctccgtat
tggatgatgaacaagacaggcaggttgctgcagtacaaggccgacgacatccaccggaaa
cacccactggactacgacatgcctctgctcttctcgttcaagcctcggtacttcctgaaa
aacaataaggtccgtctcatgatatcagacagtgaactctctgatgacttctccctggat
accgttggtagctatggagatgtgaaatgtaaaggccgatacaaagactacttggttggt
gtgaagattgacgcgagcagtttcagtctgacccgcatcgtgaccttcgtgccattttac
atgctggtcaacagaaccaagcacagcgtcttcatatgtgaagagcggcaggacaactgg
accgaagctaagcccttacagtcagccattcccttttggcctgagaacgacgccaagcgg
ctgaagatcaaagtggaaggttgcttgttgcctcctcgaactattgacttcacacgacaa
gaaaactgcctgttgctgcatctggacaactctgtgggtgggatcactgtagatgtgaac
ttgtctgagcactcggccacaatccgcttctctgagtatcacgatggcgcagcccctttc
ctcatcatcaacaacacaaaagaccagacactgcagtttcatcagagcgctcggaaacaa
tcgtgggtggctgatgagctactcgacctctccttctcagtggaggaggacagctctcag
gcggaggcagagcacgaggtgctggatgctgggaaagctgtgcactacacctggactgaa
cccactgggtcccgagagctttgctggaagtgcggtacttacagtgggaagctgaagagt
gaggaggacctacgggaggacatgaacaataaggggaaactatttgtgatctctttctat
gaaggtcttcagcgagttgtgctcttcaccgaggaggaacacatctacaagctgctctgt
gagaacgaaaaggcacagctggccgaacaggaaatcaacctgtcgctacagaacgtgggc
gtgtctctggtcaacaataacagcggccaggaggtctccttcattgggatcacaagctct
gatgttgtgtgggagttgaagcctaagaagaaaagtcggtggaagactatgagcactaaa
gaagctgagatgctggagatcagttataaagagtacatggattctggacccgtagaccac
gccatcgttgacctggaaaacaacttccaggtgtcctttactcctaatggcatggatatg
cggatgatgcagccgtgtgatgctcctctcaggaggagcttcctgcctggagtgaaggtg
gagtacagcatctctccacgacagagagcctaccgtgtccagatccaccgcattcagatc
cagaaccagctgcccggagctatcttcccgtacgtgttctaccctgtgaaactgcctaaa
tctatcaccatggatgcagaacccaaacctctaactgacatcagcattgttaccagagca
gcagggcactctgacatctcacgcatcaagtactttaaggtgttgattcaagaaatggac
ctaaagctcgatctgggcttcctgtatgccatcctggacctgttcacacctgagaatgcc
agcatcatgagctcacaacaggaggtggaactgtttgagaaggacatagagtacataaag
acagaactgaaccacgtctctgctgctgacacctctcctatcagcctctacgagtacttc
cacatctcccccatcaagctgcacctgagtttctctctaagtacgggaggggaagacggc
atgaaggagaagagagacaaggaactcattcctgtccagtccctgaacctgctgctgaag
agtatcggtgccactctcacagatgtgcaggacgtcgtcttcaagctggccttctttgag
ttgaccttccggttttgtaccacccagcagctacaatgggaggtcatcaggcattattcc
aagcaggctattaaacagatgtatgtgctggtgctgggcctggatgtacttggaaatcct
ttcgggctgatcagaggactgtcggagggagtggaagccttcttctatgagccgtatcag
ggagccatccaggggcccgaggagtttgttgaaggaatggctctgggggtgaaggctctg
gtgggaggagctgtagggggtatagcaggtgcagcctccaggatcacaggagccatggca
aagggtgtcgctgccataacgatggacgaggagtaccagcagaaaagaagagaaactatg
aacaaacaacccagtggcctgagagaggggctgaccagaggggggaagggattagtgtct
ggttttgtcagtggcatcacaggcatcgtcaccaaacctatcaaaggagcacagaaggag
ggtgcagcaggcttttttaaaggtgttgggaaaggtctggttggtgctgtagcgagacct
acaggaggcattattgacatggccagcagtactttccaagggatcaagagagcagcagag
acatcacaagacattgcctctttgcgaccgccacgtttcattcacgaggatggagtcata
cgcccatataaggagagggagggcatcggcagccagatgctgcagaaaattgagaatgga
cgttttgccaagtacagatactttgctcatgccaaggtcaatgattcagacttcttcatg
atcaccaagaggggaatattttttgtgaccaaaggtacgtttggccagctgacctgtgag
tggcagtatctgtttgaagagttcaccaaggatccgatgatcgtcgaggaccgccgactt
cgcatcgaggccaaggagagagtaaagtccgtctttcatgccaaggagtttgggaagatc
ataaacttcaaaactcctgagatcgctacatgggttctggcccgattggacgatgcaaga
gagagcttgcaaaaatactga
DBGET
integrated database retrieval system
