Eleginops maclovinus (Patagonian blennie): 134874234
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Entry
134874234 CDS
T09869
Symbol
zgc:152968
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134874234 (zgc:152968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emac03009
]
134874234 (zgc:152968)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Pre-60S particles
RNases
134874234 (zgc:152968)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Zwint
Motif
Other DBs
NCBI-GeneID:
134874234
NCBI-ProteinID:
XP_063754368
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All DBs
Position
12:complement(10370964..10378396)
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AA seq
1148 aa
AA seq
DB search
MFSSSGLFADINCPFSKRGLCGRPYCLYKHAKELQGMFGASEKSSTVDFAGVQNSYAVND
ETKDDCLQELERINKEIETVRHEVAQEQKRLSRYQTVQVDGINTATAFSVSTSETAGKLK
GKGTGGLSSYTTFRKTYSRERKYVVDNSKPRTDLEYDPLSNFSAGVGSYSSAAKEQKVKN
GQGLKRARKAVPCDNKKPVVCQPDQFFSPSPEPLDDSNEDSLLIIDIPPSPDNKIVRAQK
SGDSVAGKYIKEEIDKLGVEKTHILLNSEAYKVTSQPASKIKGDKLSINCVAGKTQSLIN
LYENEQCENIPVDASAVESTGFSEDRFQAAEEVVEKITEPSNPSNLDQQVNWNNLVFEKE
EKTFQVEFLQCDRQNCAEQMNPLQAHHFPPKNSLFNLASDANSDSPCRKKPNQAAEPENF
LESASDSGYAQAWHESSASSMTNGAESASPSTEQLLVKEATGSVVYISSDDDELNYSAIE
LSDSDPMEECYRIFMEANEDKEDEEQPDVSIGAMDEEKNKLDVKQQALPGKKRVAHEVKH
IEQPPSKSRPQHQVLVPLLGPVVSGFASQSSITSEVQQVQQRASMLTASVKGVQHLVHPN
SQRRPETQSAPLSSTQTTGYMQPAPVQNTYMNYISLGTAVIGVGNNLHLILPEGTFPLPV
TSSSGQVTSVLTPISQVPTSTVAVRQMYPLPVVTPMQRYRTTAPVLIPAPARKPSLTSAF
AAAHSSPTTSTTAQTAVNAGLKLVPTKRKMKQQCETVKVPHDTRQRYVNLFTEEFLKTTA
NVNDAFEKALAEEKAVYNRSMNKLKYMSVAVNALKKLKNQVAVADKDENEVNSQKSKGNI
PLNLKFKGHDDTALYESLKEYILTEEKLVERNFPFQHPEKPGCAVLFADNKKGHADSLKR
ICCRCGATYSVSQTGKHIRKEECNYHYGKGVTKKVPGGVETRYSCCEGVMGAPGCQVFKL
HVHDFISLDGFVSTVPRHPSDASCHRVYSLDCEMCYTIHGLELSRVTVVNCNLQVVYDTF
VKPDYEVIDYNTRFSGISDEDLKGNLTSLREVQETLLSFISADTILIGHGLETDLYALKL
LHGMVVDTSVVFPHRLGPPHKLTLNKLTADYLRRIIQESVCGHDTADDAAACMELMLWRV
KEDGKFKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctcgtctggtctttttgctgatataaactgtccattctcaaaacgtgggctt
tgtgggcgaccttactgtttgtacaaacatgccaaggaactgcagggtatgtttggtgca
tccgaaaaatcatcgacagttgactttgcaggagtgcaaaatagctatgcagtgaatgat
gagaccaaagatgactgcctccaagagctggagaggattaacaaggagattgaaactgta
aggcatgaggtagctcaggagcaaaagcgactgtcacgctaccagaccgtacaggtagac
ggcataaacactgcaactgctttctctgtttccacatctgagactgcaggtaaacttaaa
ggcaaaggaaccggtgggctatcttcatacacaacctttagaaaaacgtactcccgagaa
aggaaatacgtagttgacaattcaaaaccaaggactgatttggagtatgaccctctgtcc
aacttttctgctggcgtaggttcctacagctcagctgctaaagagcaaaaagtgaaaaat
ggacaaggtttgaaaagggcacgaaaggctgttccttgtgacaataagaaaccagttgta
tgtcagcctgaccaattcttctcgccatcaccagagccacttgatgactccaatgaagac
agcctcctaattatcgacattcctccctctcctgacaacaaaatagtgagagcgcagaaa
tccggtgattctgttgctggcaaatacatcaaggaagaaatagataaattgggagttgaa
aaaacacacattttacttaattctgaggcatacaaagttacatctcaacctgcatcaaag
ataaaaggagataaactttctattaactgcgtagctggaaaaactcaaagtcttattaat
ctttatgagaacgaacaatgtgaaaatataccagttgatgcgagtgcagttgagtcaact
ggcttttcagaagaccgctttcaggctgcagaagaagtagttgagaaaattactgaacct
tcaaatccttccaatttagaccagcaagttaactggaacaatctggtttttgaaaaggaa
gaaaagacatttcaggttgaatttcttcagtgtgatcggcaaaattgtgctgagcaaatg
aatcctctgcaggcgcatcattttccaccaaagaattcactgtttaatctcgcttcagat
gctaattcagactcaccatgtaggaaaaaacccaatcaagctgctgaacctgaaaacttc
cttgagtcagcttcagacagtggctacgctcaagcttggcatgagtcatcagcatcaagt
atgactaatggcgctgaatcggcatccccatccactgaacagcttttggtgaaagaagcg
actgggagtgttgtatacattagctctgatgacgatgaactcaactactcggctatagag
ctgtcagacagtgacccaatggaggaatgctacaggatcttcatggaggccaacgaggat
aaggaagatgaggagcagccagacgtatctattggagctatggatgaagagaagaacaag
ttagatgtcaaacaacaagcattgccagggaagaagagggtggctcatgaagtcaaacat
atagagcagccaccgagtaagagcagacctcaacaccaggtgctggttcccttgcttggg
cctgtggtgtcagggtttgcctcccagtcctccatcacctctgaggtccagcaggtccag
cagagagcctcgatgctgacagcttcagttaaaggtgttcagcatctggttcaccccaac
tctcagaggaggccagagacccagagtgcacctttgtcttcaactcaaacaactggatac
atgcagcccgctcctgtgcaaaatacttacatgaactacatatctttgggaactgctgtg
attggagtgggcaacaacttgcatttgatcctcccagaaggcacctttcctctgcctgtc
acttctagttccggccaagttacttcagtgctaaccccaatcagtcaggtgcctacaagc
actgtcgctgtgagacaaatgtaccctctacctgtagttacccccatgcaaagataccgc
acaacagcacctgtgctcatccctgcaccggcacgtaaaccctcactgacatctgccttt
gcagcagcacattcaagtccaactacttccactacggctcaaactgctgtcaatgctggc
cttaagctggtgcctactaaacgtaagatgaagcaacagtgcgagactgtcaaagttccc
catgacacccgacaacgttatgtcaacttgtttacagaggagttcctcaagacaacagcc
aatgttaacgatgcctttgaaaaggcacttgctgaagagaaggctgtttataatcgcagt
atgaacaaactcaaatatatgagtgttgctgtaaatgcactgaagaagctcaagaaccaa
gttgccgttgctgataaagatgaaaatgaagtcaacagccaaaaatccaaaggcaacatt
ccccttaatctgaagtttaaaggacatgatgatacagcattgtatgagagcttgaaggaa
tatattttgactgaggaaaagctggttgagaggaactttcctttccagcacccagagaaa
cctggctgtgctgttctttttgctgacaacaagaaaggccacgcggactccctcaagagg
atctgctgccgatgtggcgctacttactctgtgagccaaacgggcaagcacattcgtaag
gaggaatgcaactaccactatgggaaaggagttacaaagaaggtgccaggtggagttgag
acccgctacagctgttgtgaaggagtcatgggagcccctggatgtcaggtgtttaagctg
catgtccatgactttatcagcttggatgggtttgtgtcgaccgtcccaagacatccctca
gatgcgagctgtcatagggtctactccttggattgtgaaatgtgttataccattcatggc
ctggagctgtccagagtgactgtggtcaactgtaatctgcaagtcgtctatgataccttc
gtcaaacctgattatgaagtcattgattataacaccaggttttcaggcatcagtgacgaa
gatcttaaaggaaacctcacctccctcagagaggtgcaggagaccttattgagcttcatc
agcgcagacaccattcttattggacacggcctggaaacagacctctatgccctgaagttg
ctccatgggatggtggtagacacatcagtggtcttcccacatcgcctgggcccccctcac
aagctgaccctcaacaaactcactgctgattacctcaggagaatcatccaagagagtgtt
tgtggccatgacaccgcagacgatgctgctgcctgcatggagcttatgttatggagggtc
aaagaagatggaaaatttaaaaaatga
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integrated database retrieval system
