KEGG   Eleginops maclovinus (Patagonian blennie): 134874485
Entry
134874485         CDS       T09869                                 
Symbol
recql4
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4
  KO
K10730  ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:emac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:emac03032]
    134874485 (recql4)
   03400 DNA repair and recombination proteins [BR:emac03400]
    134874485 (recql4)
Enzymes [BR:emac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     134874485 (recql4)
DNA replication proteins [BR:emac03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    134874485 (recql4)
DNA repair and recombination proteins [BR:emac03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     134874485 (recql4)
SSDB
Motif
Pfam: Helicase_C DEAD Drc1-Sld2 zf-CCHC ResIII zf-CCHC_3
Other DBs
NCBI-GeneID: 134874485
NCBI-ProteinID: XP_063754581
LinkDB
Position
13:12053205..12065504
AA seq 1617 aa
MDRYNDVKLQLKTWEQGFVKDHQRKPNKEDIDQAPDETRNLYKEYRSLKQAKENSSSDAG
SGHAEQAKATAAVNTPQKDSDCWGSHLNRSSQPAPSPRLTSEDRDNLQASSQYYGMKLKN
NIGTLSKERPVSLKKSFVPGRVPLNSLKDGLTGHTNSPVATPVKNPFNEPRSSPFTPRRF
NAGLVSKTPHKVEPEEPCEPFESIKDSCEEPTSAAISFSSPSVISSKSCTGKVISSQNLN
ISYLAPSPARSCALLPSLSSPSRPGTLRGDVGATGKLNESIGTIGDKEKDVETLRTPHKG
VEEAGVGALISLRGSPQVIAGFRGGKAGKPSPASRLSFVDKKWLERCQVFGEMGAEVKPG
AGNMEINVDKRGEGEEGKDTQVKIQEDEKAVKEVVDVARERRASKVSGKDIEPKSNAHDK
TVSESEPEPSLQHPGKSNQGKDKGKAKXKGDIEEMEIGLTPPLTPEKDNEASHKSKGVKK
KGKKRQREAEHNEGETPEEGGVKKRRKKKEESSVGNPGTAQEGGKKKRSKKKGDEEEEAE
EEKKTKEPKKLPQENLLGEIEEDYKARRAYKTQPAKVKGMKGAEGNFVKINLKKKSHVKG
YALRGAGLRKQIYMEKFQLKGERFGGHGFLSRGRGGGFRGGGFRGGFRGGMNQSGDTCYK
CGGTGHWAINCKGPAPPPSAADHQPDEEEPFELPTLEEVARATGTLQPQPTAASSSTAEE
QPSQDKQGDSNLKDEVLLNVIRPDYERPVAPPPMEPLFPLTDDGKVQEAPPELYEALKEL
GYQSFRPGQAEAIMRILSGLSTLVVLSTGMGKSLCYQLPAYMYAKRSNSITLVISPLVSL
MDDQVSGLPANLKAACIHSNMSKKQREAAIEKVKAGEVCVLLLSPEALVGGGGSGSGCLP
SAQDLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCLLGLTATATLSTALD
IARHLNINDKDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLKGDRFGCLDSIIVYCTRR
EETTRISALLRTCLQGVILKESKYKNTNSQAQHNPVGQKKKDLARKKIRKPLKWQAESYH
AGLSSSERRRVQNNFMCGELRLVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRA
GRDGEPAHCHLFLNPEGEDLHELRRHIYSDTVDYFTVKKLVQKVFPPCKCKQIHQKQQEL
EQDMEDAEMMEMMDMCDQENLNPPNQQDSEHTDTPEQSTAQESSHPEAAELPLQDCKDEE
KKMELEEKKDEQSVEHEEADNSIKPKEGESKEDDWLRDQEEEGSDWPKERVCHTHERAIP
MEATVEALDITEEGVETLLCYLELHPQRFVELLHPTLSVCKIGCYSGPKQLQKLTKICPP
IAVVLARRRMAGERVETCDQLEFDVVEVADTMGWQLSLVKRGLRQLQWSSVGGRSGVSVE
LSSISFYFRSFGDLDDEEMDRVCQFLYNRVQSQEKTQLYQLTSSFKAFKSVAFPSASFCV
DDLDESRSVRLKELLSEYFDKRRDLSQMLAPVYIEELDKYKVSDCESHIRADIRSFLSNR
SDEKFSGRAIARILHGIGSPCYPAQIYGRDRRYWRKYIQFDFNQLIRLATQEIIHFK
NT seq 4854 nt   +upstreamnt  +downstreamnt
atggatcgatacaacgatgtgaaacttcagctgaaaacctgggagcaagggtttgttaaa
gaccaccagaggaaacctaacaaggaggacattgatcaagctccagatgaaaccaggaac
ctgtataaagagtaccgcagtttgaaacaagccaaagaaaacagcagcagtgatgcaggc
agcggacatgctgaacaggccaaagctacagctgcggtcaacacaccacagaaggattca
gactgttggggttcccatctgaaccgcagctcacagcctgcaccttctcccagactgaca
tccgaggacagagacaatctacaggcatcttcccaatactatggcatgaaactgaaaaac
aacatagggacactcagtaaggagagacctgtctcactgaagaagtcgttcgttcctgga
cgggtgcctcttaactccttgaaagatggactaactggacacacaaacagccctgttgct
acccctgtgaagaacccattcaatgaaccccgatccagccccttcacaccaagaagattt
aacgctggtctggtttcaaagacaccccataaagtggagcctgaagagccgtgtgaaccc
tttgaatctatcaaagattcttgtgaagaaccgacaagtgctgccataagttttagtagt
cctagtgttataagtagtaagagttgtactggtaaagttattagttcacaaaatctgaat
atctcttatctagctccctctccagccagatcttgtgcactgttgccgtcattatcttct
ccaagtaggccaggaactttaagaggagatgtaggagccacggggaaattaaatgaaagt
ataggaactataggagacaaagaaaaagatgtggaaactttaagaactcctcacaagggt
gttgaggaggcaggtgttggagctttgatcagcttgaggggaagccctcaggttattgct
ggtttcagaggaggaaaagcaggaaagccctctcctgccagcagactgagttttgttgac
aagaagtggctggagcggtgtcaggtgttcggagagatgggggctgaggtgaagcctgga
gcaggaaacatggagataaatgtggataaaagaggagagggcgaagagggaaaagacaca
caagttaaaatacaagaagatgagaaagctgtcaaagaagttgtagatgtagcgcgagaa
agaagagcatcaaaagtttcggggaaagatatagagcctaagagcaatgctcatgacaaa
acagtcagcgaaagtgaaccagaaccttctctacaacaccctggaaaaagtaatcaagga
aaggacaaaggaaaagcaaaanagaagggagatattgaggagatggaaataggactgaca
ccacctttaacgccagaaaaagacaatgaggcaagtcacaaatctaaaggtgtgaagaag
aaaggaaagaaaaggcagagagaggcagagcataatgaaggagagacgccagaggaggga
ggagtaaagaagaggcgcaagaagaaagaggagagctctgttggaaaccccggcaccgct
caagaaggagggaagaaaaagagatccaagaaaaagggagatgaagaagaggaggcagaa
gaagagaaaaaaaccaaggaaccaaaaaagcttcctcaggagaacttgttgggcgaaata
gaagaggactataaagccagaagagcgtataaaactcagcctgccaaagtcaaaggcatg
aaaggggcagagggaaactttgtgaagataaatctgaagaagaaatctcatgtaaaagga
tacgctctcagaggtgctggtctacgcaaacagatctatatggagaagttccagctgaag
ggcgaacgtttcggtggacatggatttcttagcagaggaagagggggaggtttcagaggg
ggaggattcagaggaggtttcagaggggggatgaatcagtcgggggacacctgctacaag
tgtggagggaccggacactgggccataaactgcaaaggaccagcccctcccccctctgct
gctgaccatcagcccgatgaggaggagccgtttgaactgcccaccctggaggaggttgct
agggcaacaggcacactgcaacctcagccaacggcagcgtcttccagtacagcagaggag
cagccgtcccaggataagcaaggggacagtaaccttaaagacgaggtgttgctgaatgtg
attcgtccagactatgagcgtcctgttgctccacctccaatggaaccactatttcctctc
acagatgatgggaaagtccaggaagcgcctcctgagctgtatgaggctctgaaagaactc
ggctatcagtcatttagacccggacaagcggaagccatcatgaggatactgtcaggtctg
tctaccctggtagtgttgtcaacggggatgggtaaatcgttgtgctatcagctcccagcc
tacatgtacgctaagcgatcaaatagcatcactttggtcatttcccctctagtctcgctg
atggatgaccaggtgtctggcctgccagccaatctgaaggcagcctgtattcactccaac
atgagcaagaaacagagggaagctgcgatagaaaaggtgaaggcaggtgaggtgtgtgtg
ttgctcctctctccggaggctctggtggggggaggcggttcaggttcaggttgtctgccc
tctgctcaggatctccctcctgtggccttcgcctgtatcgacgaagctcattgcgtctca
gaatggtcgcacaacttcagaccctgctacctgagactctgtaaggtactaagggagcgt
ttgggagtgcagtgcttgctgggactcacggctacagccacactgtccactgctctggac
atcgcacgacatctgaacatcaacgataaagacggcattgcagtccgatctgcagcagtg
cctcctaacctgcacctgtctgtgtccatggatagagaaaaagatcaggctttagtgtcc
ttgctgaaaggagatcgttttggttgtctggactccatcatcgtctactgtactcgaaga
gaggagactactcgcatttcagcgctgctcaggacctgcctgcaaggagtgatcctgaaa
gaaagcaaatataagaacactaacagtcaggcacaacacaaccctgtgggacagaaaaag
aaagacttggcaaggaagaagattcgtaaacctctgaaatggcaggcggagtcgtaccac
gctggcttgtcctcttcagagcgccgtcgtgtccagaacaacttcatgtgcggggagctc
agactcgtggtggccactgtggcgtttggcatgggcctcgataaatctgatgtccgcggt
atcatccactacaacatgcctaaaagctttgagagctacgtccaggagattgggagagca
ggaagagatggagagcccgcacactgtcacctctttctgaatcccgagggggaggacctc
catgagctccgtcgtcatatatactcggacacagtggactacttcacagtaaagaaactg
gtccagaaagttttccctccatgtaaatgtaaacagattcaccagaaacaacaggagctt
gaacaggacatggaagatgcggagatgatggaaatgatggatatgtgcgaccaggagaac
ctgaaccctcctaatcagcaggactcagaacatacagatacaccagaacagtcaactgca
caggagtcatcacatccagaagcagcagagctacctctccaagactgtaaagatgaagag
aagaaaatggagttggaggagaagaaagatgagcagagtgtcgaacacgaagaagcagac
aactcgataaagcccaaggaaggggagtcgaaagaagatgattggctaagggaccaggaa
gaggagggcagtgattggcccaaagagcgggtctgtcacacgcatgagagagcgattccc
atggaagcaactgtggaggctctggacatcacagaggaaggtgtagaaacgctgctctgc
tatctggagctgcatccccagcgctttgttgaactgctccaccccacgctgtctgtgtgt
aaaatcggctgctatagtggacccaaacaactccagaaactaactaaaatttgccctccc
attgctgtggtgttggccagaaggcgcatggcgggcgagcgggtggagacgtgtgatcag
ctggagttcgacgttgttgaggttgcagacactatgggatggcagctatctcttgtgaaa
agaggactccgacagctgcagtggtcctcggtcggaggccgtagcggtgtcagcgttgaa
ttgtcctccatatcgttctacttccgatcctttggcgacctcgatgatgaggagatggac
agagtttgtcagttcctctataatcgcgtccagagccaggagaagacgcagctctaccag
ctaacctcctccttcaaggccttcaagagcgttgcgttccccagcgcatcgttctgtgtc
gacgacctggatgagagtcgcagtgtgaggctgaaagagctgctgtccgagtacttcgac
aagaggcgagacctaagccaaatgctcgctccggtgtacatcgaggagctcgacaaatat
aaggtgtcagactgtgagagtcacatcagagcagacatcagaagttttctttccaaccgg
agtgatgagaagttttctggaagagctattgctagaatcctccacggcataggcagccct
tgttatcctgctcagatctacggcagggacaggcgctactggaggaagtacatccagttt
gacttcaaccagctcatcagactggccactcaggagatcattcacttcaagtga

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