| Entry |
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| Symbol |
recql4
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| Name |
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4
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| KO |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:emac03032]
134874485 (recql4)
03400 DNA repair and recombination proteins [BR:emac03400]
134874485 (recql4)
Enzymes [BR:emac01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134874485 (recql4)
DNA replication proteins [BR:emac03032]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
134874485 (recql4)
DNA repair and recombination proteins [BR:emac03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
134874485 (recql4)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
13:12053205..12065504
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| AA seq |
1617 aa
MDRYNDVKLQLKTWEQGFVKDHQRKPNKEDIDQAPDETRNLYKEYRSLKQAKENSSSDAG
SGHAEQAKATAAVNTPQKDSDCWGSHLNRSSQPAPSPRLTSEDRDNLQASSQYYGMKLKN
NIGTLSKERPVSLKKSFVPGRVPLNSLKDGLTGHTNSPVATPVKNPFNEPRSSPFTPRRF
NAGLVSKTPHKVEPEEPCEPFESIKDSCEEPTSAAISFSSPSVISSKSCTGKVISSQNLN
ISYLAPSPARSCALLPSLSSPSRPGTLRGDVGATGKLNESIGTIGDKEKDVETLRTPHKG
VEEAGVGALISLRGSPQVIAGFRGGKAGKPSPASRLSFVDKKWLERCQVFGEMGAEVKPG
AGNMEINVDKRGEGEEGKDTQVKIQEDEKAVKEVVDVARERRASKVSGKDIEPKSNAHDK
TVSESEPEPSLQHPGKSNQGKDKGKAKXKGDIEEMEIGLTPPLTPEKDNEASHKSKGVKK
KGKKRQREAEHNEGETPEEGGVKKRRKKKEESSVGNPGTAQEGGKKKRSKKKGDEEEEAE
EEKKTKEPKKLPQENLLGEIEEDYKARRAYKTQPAKVKGMKGAEGNFVKINLKKKSHVKG
YALRGAGLRKQIYMEKFQLKGERFGGHGFLSRGRGGGFRGGGFRGGFRGGMNQSGDTCYK
CGGTGHWAINCKGPAPPPSAADHQPDEEEPFELPTLEEVARATGTLQPQPTAASSSTAEE
QPSQDKQGDSNLKDEVLLNVIRPDYERPVAPPPMEPLFPLTDDGKVQEAPPELYEALKEL
GYQSFRPGQAEAIMRILSGLSTLVVLSTGMGKSLCYQLPAYMYAKRSNSITLVISPLVSL
MDDQVSGLPANLKAACIHSNMSKKQREAAIEKVKAGEVCVLLLSPEALVGGGGSGSGCLP
SAQDLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVQCLLGLTATATLSTALD
IARHLNINDKDGIAVRSAAVPPNLHLSVSMDREKDQALVSLLKGDRFGCLDSIIVYCTRR
EETTRISALLRTCLQGVILKESKYKNTNSQAQHNPVGQKKKDLARKKIRKPLKWQAESYH
AGLSSSERRRVQNNFMCGELRLVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRA
GRDGEPAHCHLFLNPEGEDLHELRRHIYSDTVDYFTVKKLVQKVFPPCKCKQIHQKQQEL
EQDMEDAEMMEMMDMCDQENLNPPNQQDSEHTDTPEQSTAQESSHPEAAELPLQDCKDEE
KKMELEEKKDEQSVEHEEADNSIKPKEGESKEDDWLRDQEEEGSDWPKERVCHTHERAIP
MEATVEALDITEEGVETLLCYLELHPQRFVELLHPTLSVCKIGCYSGPKQLQKLTKICPP
IAVVLARRRMAGERVETCDQLEFDVVEVADTMGWQLSLVKRGLRQLQWSSVGGRSGVSVE
LSSISFYFRSFGDLDDEEMDRVCQFLYNRVQSQEKTQLYQLTSSFKAFKSVAFPSASFCV
DDLDESRSVRLKELLSEYFDKRRDLSQMLAPVYIEELDKYKVSDCESHIRADIRSFLSNR
SDEKFSGRAIARILHGIGSPCYPAQIYGRDRRYWRKYIQFDFNQLIRLATQEIIHFK |
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| NT seq |
4854 nt +upstreamnt +downstreamnt
atggatcgatacaacgatgtgaaacttcagctgaaaacctgggagcaagggtttgttaaa
gaccaccagaggaaacctaacaaggaggacattgatcaagctccagatgaaaccaggaac
ctgtataaagagtaccgcagtttgaaacaagccaaagaaaacagcagcagtgatgcaggc
agcggacatgctgaacaggccaaagctacagctgcggtcaacacaccacagaaggattca
gactgttggggttcccatctgaaccgcagctcacagcctgcaccttctcccagactgaca
tccgaggacagagacaatctacaggcatcttcccaatactatggcatgaaactgaaaaac
aacatagggacactcagtaaggagagacctgtctcactgaagaagtcgttcgttcctgga
cgggtgcctcttaactccttgaaagatggactaactggacacacaaacagccctgttgct
acccctgtgaagaacccattcaatgaaccccgatccagccccttcacaccaagaagattt
aacgctggtctggtttcaaagacaccccataaagtggagcctgaagagccgtgtgaaccc
tttgaatctatcaaagattcttgtgaagaaccgacaagtgctgccataagttttagtagt
cctagtgttataagtagtaagagttgtactggtaaagttattagttcacaaaatctgaat
atctcttatctagctccctctccagccagatcttgtgcactgttgccgtcattatcttct
ccaagtaggccaggaactttaagaggagatgtaggagccacggggaaattaaatgaaagt
ataggaactataggagacaaagaaaaagatgtggaaactttaagaactcctcacaagggt
gttgaggaggcaggtgttggagctttgatcagcttgaggggaagccctcaggttattgct
ggtttcagaggaggaaaagcaggaaagccctctcctgccagcagactgagttttgttgac
aagaagtggctggagcggtgtcaggtgttcggagagatgggggctgaggtgaagcctgga
gcaggaaacatggagataaatgtggataaaagaggagagggcgaagagggaaaagacaca
caagttaaaatacaagaagatgagaaagctgtcaaagaagttgtagatgtagcgcgagaa
agaagagcatcaaaagtttcggggaaagatatagagcctaagagcaatgctcatgacaaa
acagtcagcgaaagtgaaccagaaccttctctacaacaccctggaaaaagtaatcaagga
aaggacaaaggaaaagcaaaanagaagggagatattgaggagatggaaataggactgaca
ccacctttaacgccagaaaaagacaatgaggcaagtcacaaatctaaaggtgtgaagaag
aaaggaaagaaaaggcagagagaggcagagcataatgaaggagagacgccagaggaggga
ggagtaaagaagaggcgcaagaagaaagaggagagctctgttggaaaccccggcaccgct
caagaaggagggaagaaaaagagatccaagaaaaagggagatgaagaagaggaggcagaa
gaagagaaaaaaaccaaggaaccaaaaaagcttcctcaggagaacttgttgggcgaaata
gaagaggactataaagccagaagagcgtataaaactcagcctgccaaagtcaaaggcatg
aaaggggcagagggaaactttgtgaagataaatctgaagaagaaatctcatgtaaaagga
tacgctctcagaggtgctggtctacgcaaacagatctatatggagaagttccagctgaag
ggcgaacgtttcggtggacatggatttcttagcagaggaagagggggaggtttcagaggg
ggaggattcagaggaggtttcagaggggggatgaatcagtcgggggacacctgctacaag
tgtggagggaccggacactgggccataaactgcaaaggaccagcccctcccccctctgct
gctgaccatcagcccgatgaggaggagccgtttgaactgcccaccctggaggaggttgct
agggcaacaggcacactgcaacctcagccaacggcagcgtcttccagtacagcagaggag
cagccgtcccaggataagcaaggggacagtaaccttaaagacgaggtgttgctgaatgtg
attcgtccagactatgagcgtcctgttgctccacctccaatggaaccactatttcctctc
acagatgatgggaaagtccaggaagcgcctcctgagctgtatgaggctctgaaagaactc
ggctatcagtcatttagacccggacaagcggaagccatcatgaggatactgtcaggtctg
tctaccctggtagtgttgtcaacggggatgggtaaatcgttgtgctatcagctcccagcc
tacatgtacgctaagcgatcaaatagcatcactttggtcatttcccctctagtctcgctg
atggatgaccaggtgtctggcctgccagccaatctgaaggcagcctgtattcactccaac
atgagcaagaaacagagggaagctgcgatagaaaaggtgaaggcaggtgaggtgtgtgtg
ttgctcctctctccggaggctctggtggggggaggcggttcaggttcaggttgtctgccc
tctgctcaggatctccctcctgtggccttcgcctgtatcgacgaagctcattgcgtctca
gaatggtcgcacaacttcagaccctgctacctgagactctgtaaggtactaagggagcgt
ttgggagtgcagtgcttgctgggactcacggctacagccacactgtccactgctctggac
atcgcacgacatctgaacatcaacgataaagacggcattgcagtccgatctgcagcagtg
cctcctaacctgcacctgtctgtgtccatggatagagaaaaagatcaggctttagtgtcc
ttgctgaaaggagatcgttttggttgtctggactccatcatcgtctactgtactcgaaga
gaggagactactcgcatttcagcgctgctcaggacctgcctgcaaggagtgatcctgaaa
gaaagcaaatataagaacactaacagtcaggcacaacacaaccctgtgggacagaaaaag
aaagacttggcaaggaagaagattcgtaaacctctgaaatggcaggcggagtcgtaccac
gctggcttgtcctcttcagagcgccgtcgtgtccagaacaacttcatgtgcggggagctc
agactcgtggtggccactgtggcgtttggcatgggcctcgataaatctgatgtccgcggt
atcatccactacaacatgcctaaaagctttgagagctacgtccaggagattgggagagca
ggaagagatggagagcccgcacactgtcacctctttctgaatcccgagggggaggacctc
catgagctccgtcgtcatatatactcggacacagtggactacttcacagtaaagaaactg
gtccagaaagttttccctccatgtaaatgtaaacagattcaccagaaacaacaggagctt
gaacaggacatggaagatgcggagatgatggaaatgatggatatgtgcgaccaggagaac
ctgaaccctcctaatcagcaggactcagaacatacagatacaccagaacagtcaactgca
caggagtcatcacatccagaagcagcagagctacctctccaagactgtaaagatgaagag
aagaaaatggagttggaggagaagaaagatgagcagagtgtcgaacacgaagaagcagac
aactcgataaagcccaaggaaggggagtcgaaagaagatgattggctaagggaccaggaa
gaggagggcagtgattggcccaaagagcgggtctgtcacacgcatgagagagcgattccc
atggaagcaactgtggaggctctggacatcacagaggaaggtgtagaaacgctgctctgc
tatctggagctgcatccccagcgctttgttgaactgctccaccccacgctgtctgtgtgt
aaaatcggctgctatagtggacccaaacaactccagaaactaactaaaatttgccctccc
attgctgtggtgttggccagaaggcgcatggcgggcgagcgggtggagacgtgtgatcag
ctggagttcgacgttgttgaggttgcagacactatgggatggcagctatctcttgtgaaa
agaggactccgacagctgcagtggtcctcggtcggaggccgtagcggtgtcagcgttgaa
ttgtcctccatatcgttctacttccgatcctttggcgacctcgatgatgaggagatggac
agagtttgtcagttcctctataatcgcgtccagagccaggagaagacgcagctctaccag
ctaacctcctccttcaaggccttcaagagcgttgcgttccccagcgcatcgttctgtgtc
gacgacctggatgagagtcgcagtgtgaggctgaaagagctgctgtccgagtacttcgac
aagaggcgagacctaagccaaatgctcgctccggtgtacatcgaggagctcgacaaatat
aaggtgtcagactgtgagagtcacatcagagcagacatcagaagttttctttccaaccgg
agtgatgagaagttttctggaagagctattgctagaatcctccacggcataggcagccct
tgttatcctgctcagatctacggcagggacaggcgctactggaggaagtacatccagttt
gacttcaaccagctcatcagactggccactcaggagatcattcacttcaagtga |
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