Eleginops maclovinus (Patagonian blennie): 134874783
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Entry
134874783 CDS
T09869
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134874783 (smarcc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134874783 (smarcc1b)
03036 Chromosome and associated proteins [BR:
emac03036
]
134874783 (smarcc1b)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134874783 (smarcc1b)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134874783 (smarcc1b)
PBAF complex
134874783 (smarcc1b)
GBAF(ncBAF) complex
134874783 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
134874783
NCBI-ProteinID:
XP_063755042
LinkDB
All DBs
Position
13:complement(16126104..16134362)
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AA seq
956 aa
AA seq
DB search
MATMSGGTNLSIPGTSLASSGTSAHRKKDSSPSARFWESPETLAQLEVVRQWIGKHYKKY
VLVDAPSCQALAAVTLQLLQFQEDAFGRQATNPALTKLPAQSFLDLRPGGGLCHILGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFGAIEIALIQNNCMSLPVVYVDSTVDQDLVSRLTD
VITKHQGMLTEDRTLASHHIYPLPASTEEDEWMRPVMRKDKHVLVHWGMHPDSYDSWLSS
SDVEGEVEEPPHSEKPWRVHAGWVLDTDVFNEWMNEEDYCVNERNVAIIFRRRIHLRDEQ
DSKNTPSKKRRRSSSPPSEGRKKGKKGRRRGPQEEEPEEDLTKDMEDPTPVPNMEEVILP
KIVNLKKDSENIPVKGGTMADLDELEDDFPGREDEEGRDIPRLSEGEDNITEQTHHIIIP
SYTSWFNNNSIHSIEKRSLPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTSCR
RNLTGDVCSVIRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQHK
PLQVSASQHMLYFPEKSREKPSDCQNFGLRSDIYTKKHPKTKGVSGREWTEQETLLLLEA
LEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENP
VMSTVAFLASVVDPRVASSAAKAALEEFSKVHEESLDKITEASNQPDKTELMDAEKIETN
STSLQDLTQVPLRADMLKVEPSGANVKGELVKSENAENILAEEGDGRADDDDSLDQVDVD
EGRVMEQDLVDGSVVTAAAAALSSAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR
HFEELETIMDREKEALEQQRQQLLSERQTFHTEQLKQAEIKVRQQREQQAQPGFTMQQSA
VPPASAQPMPNRMIPGGVNAQTMASRHPGAPNGMYPSSQPDGTAPAQPGPPASSHS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatgtccggaggaacaaacctcagcattccagggaccagcctagccagctcc
ggaacgtcagcacaccggaaaaaagacagcagtccgtccgctaggttctgggagagtccg
gagactttagcccagctggaggtggtgcgacagtggatcgggaagcactacaaaaagtat
gtgctggtggatgctccatcgtgtcaggctctggctgcagtcaccctgcagctcctccag
ttccaagaggatgcctttggcagacaagctaccaatcctgctctcaccaaactgcctgca
caaagcttcctggacctgcgaccagggggtggactctgccacattcttggcactgcctac
aagtttaaggcagagcaaggctggcgtaggtttgacttgcagaatccatcaagaactgaa
aggaatgttgagatgtttggtgccattgaaatagcactgatccagaacaattgtatgtca
ctgcctgtggtgtatgtggactctacagtggaccaggatctggttagcagacttacagat
gttatcaccaaacaccagggtatgctcactgaggaccgaacgctcgccagtcaccacatc
taccccttacctgcttctacagaggaagatgaatggatgcgtcctgtcatgaggaaagac
aaacatgttttggtacactggggcatgcaccctgacagttatgacagttggctgtcctca
agtgatgttgaaggagaggttgaagagccaccacattcagaaaagccgtggcgggtccat
gctggctgggttctggacacagatgttttcaacgagtggatgaacgaagaagactattgt
gtgaatgagaggaatgtagcaatcattttccgccggcgtattcacctcagagacgagcag
gactccaaaaacaccccttcaaaaaagagaagacgctccagctctcctccctctgaaggc
aggaagaagggaaagaaagggagaaggcgtggaccacaggaggaagaaccagaagaagac
ttgaccaaagacatggaggaccctacccctgtccctaacatggaggaagttattttaccc
aagattgtcaacctgaagaaggacagtgagaacattcctgtcaaaggagggaccatggct
gacctggatgaactggaggatgatttcccaggaagggaagacgaggagggaagagatata
cctcggctttcagagggagaagacaatatcacggaacaaacacatcacatcataataccg
agctacacgtcttggttcaataacaacagcattcactcaatagagaaacgttcgttgcct
gaattcttcaacggaaagaacaagtcaaaatccccagaaatctacctggcataccgcaac
ttcatgatcgacacataccggctcaacccccaggaatacctaagctcaacgtcctgcaga
cgcaacctcactggagacgtctgttctgtcataagggttcattcgtttttggagcagtgg
ggtttgattaactaccaggtggatgcagagagcaggcccctgcccatgggaccaccaccc
acccctcatttcaatgtattggctgacacaccgtccgggctggccccactacaacacaaa
cccctgcaggtgtcagcctcgcagcacatgttgtatttcccggaaaagagcagagagaag
ccttcagactgccagaactttggtctgcgctctgacatctacaccaagaaacaccctaag
actaagggagtatcaggaagggaatggacggagcaagagacgctcttgctattagaggcc
ttagaggtgtacagagatgactggaacaaagtgtcagaacatgtgggctccagaacgcag
gacgagtgtatcctccacttccttcgcttgccgatagaagacccttacctagaagactcc
tcggcttccctcggcccactggcataccagcccgtgcctttcagccaatcagaaaacccc
gtcatgagcactgtggccttcctggcatccgtggtggaccctcgggtggcatcgtctgca
gctaaggccgcactggaggagttttccaaagtgcacgaggagtcgctggataagatcact
gaagcgtccaaccagcctgacaaaacagagttgatggatgcagagaaaattgaaacaaac
tccacctcccttcaggatcttactcaggttcctttaagggcagatatgctcaaggtggaa
cccagtggggccaatgtgaaaggagaactggtcaagagcgaaaatgctgagaatatactt
gcagaggaaggagacggaagggcagatgacgacgacagcttagatcaggtggacgtggat
gaggggagggtgatggagcaggatctggtggatggcagcgttgtcacggcagcagctgct
gctctttcctccgctgccacaaaggctaagcacttggcagcagtagaagagaggaagatc
aaatccctggtggctctgctggtcgagacccagatgaagaagctggagatcaagctgaga
cattttgaggagctggagaccatcatggaccgagagaaagaggctctggagcagcagcgg
cagcagctcctgtctgagagacagacttttcacacggagcagctcaaacaggcagagatt
aaggttcgccagcagagggagcagcaggcgcagccgggattcacaatgcagcaatcagcc
gttcctcctgcatcggctcagcccatgcccaacaggatgattccgggtggagtaaacgcc
cagacaatggcttctcgacatcctggagctcccaatggcatgtacccgtcctctcagcct
gatgggacagcaccagctcagccgggtcctccagcgtccagtcacagctga
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