Eleginops maclovinus (Patagonian blennie): 134875107
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Entry
134875107 CDS
T09869
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134875107 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134875107 (cnot3b)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134875107 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134875107 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
134875107
NCBI-ProteinID:
XP_063755596
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All DBs
Position
13:7222958..7252697
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AA seq
958 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKGKIWRSEGHLSKLHNAANANQKEKYEADL
KKEIKKLQRLRDQIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGL
GLAQKVDPAQKEKEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKENQDRIEE
LKKFIEKHRHHIRMLETILRMLDNDSVQVDSVRKIKDDVEYYLDSSQDPDFEENEFLYDD
LDLDELTQTLVATSPPGQLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGR
STDSEVGQSPVKNGNPSSLSSSSSSSSSSSSSSCCSSSSVSGLTSSSLVSMAPIMGGGPG
ANSHLGSLGGLLSNTSAGSYSNATQQPPHPSAQQQQAKSLVSSAPSAPISIPISSTNSHM
ASSASSPPNAITQGLFTSSSQAQSMSGPTSTSNSLGLSLGLSLGKGGMSIPTSSMSGSLG
LSGMQASLSNMASLLSGSTPAPYAQAASSGAIGSGLPGSLGGIGISPSTSNSAVGSIGSG
SITVGGPTSSSGGLLGPAPGLSGISSSILGLGSQSGMQGSSLMSLSPVGGLAPGSGVGVI
GSNGGSSGSAGSGVVGGNMSLSGRPPSQQKQNGSTSGVPFVSFFGDTGYSAVLADSTSDS
ALTSASQSLSSQPSCLTSTANQTKDTGPSLLGSICLSSSSPSQAFYSEAKTVSGGSLLNG
PMSYSQSSDSIKPQETLSSLKSMAERAALSSGMEGDVPSLHLTPVSLPCLSSDIFPSSTT
TQSGPPSAPQLPLSEVSIPPSLGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIR
QYLMRNPCPTLPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQS
WRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactacaaggtgaaatagatcgatgtctgaaaaaagtagcggaa
ggagtcgaacagtttgaagacatttggcaaaagggcaagatttggagaagtgaaggacat
ctatccaaacttcacaatgcagcgaacgcaaatcagaaggagaaatatgaagcagacctc
aagaaagagattaaaaagctacagcgtctccgagaccagatcaagacgtgggtggcatcc
aacgagatcaaagacaaaaggcagctagtagagaaccgcaaactcatagaaacgcaaatg
gagcggttcaagatagtggagagagaaaccaagacgaaggcgtactctaaagaagggcta
ggtctggcccagaaggtggacccggcccagaaagagaaggaggaggtcggcacgtggcta
acgaatacgatagacacgttgaacatgcaggtggaccagtttgagagcgaggtggagtcc
ctctcagtccagacgaggaaaaagaaaggagacaaagagaatcaggaccggattgaggag
ctgaagaagttcattgaaaagcatcgccaccacatccggatgctggagaccatactgagg
atgctggacaacgactcagtgcaggtggactccgtcaggaagatcaaggatgatgtggag
tattacctagactcatcgcaggatccggacttcgaggagaacgagtttctctacgacgac
ctggacctggacgagctcactcagacgctggtcgccacctccccacccggacaactggag
gatgagatcttccagcactccagcagcaccccaacctccaccacctcctcctcacccatc
cccccctcgcctgccacttgcactacggagaactctgaagatgacaagaagaggggacgc
tcaacagacagtgaagtcggtcagtcacctgtgaagaacggaaacccatcttcattatcc
tcttcctcctcctcctcctcttcttcctcctcctcttcctgctgctcttcttcgtccgtc
tctggactgacctcgtcctcgcttgtctccatggcgcccatcatggggggaggacccggg
gccaacagtcacctgggtagcttggggggcctcctctccaacacgtcggccggcagctac
agcaacgccacccagcagccgccgcacccgtcggcacagcaacagcaggccaagagctta
gtgagctccgccccctcagctcccatctccatccccatcagctccaccaacagccacatg
gcctcctccgcctcttctccccccaacgccatcacacaggggctcttcacttccagctcc
caggcccagtctatgtcggggcccacctccacctccaacagcctgggcctcagcctgggc
ctctcgctggggaaaggcggcatgtccatccccaccagctccatgtctgggagccttggc
ctgtcagggatgcaggcgtccctgagcaacatggcgagcctcctgtccggctccaccccc
gccccttacgctcaggcagcctcttcaggggccataggctccggcctgcccggctctctg
ggcggcatcggcatcagcccctccacctccaacagcgcagtgggctccatcggcagcggc
agcatcacggtcggcgggccgacgtcttcatcgggggggctgctgggcccagcgccgggg
ctgagtggcatcagctccagtattctgggtctgggctcccagtcggggatgcaggggtcc
tccctcatgtcgctgagcccggtcggagggttggcgccgggaagcggagtcggagtcatt
gggagcaacggaggcagctcgggatcagcagggagtggagtggtgggggggaacatgtcg
ctctccggcagaccgcccagccaacagaagcagaacggtagcactagcggtgtacccttt
gtgtcttttttcggcgatacaggttacagcgctgtgttagcagacagcacatcagactcc
gccctcaccagtgccagccaatcactcagcagccaaccgtcgtgtctgacctccacagcc
aatcagactaaggacactggtcctagtctgctgggctctatctgtttgtcgtccagctcc
ccgtcacaggccttctacagcgaggccaagacggtgagcggcggcagcctgctgaacgga
cccatgtcctactctcagtcctccgacagcatcaagccccaggagactctgagcagcctg
aagtccatggccgagcgagcagcactcagctcagggatggagggagacgtgccctccctg
cacctcaccccagtctctctcccttgtctgtcttcagacatcttccccagcagcactacg
acccagtcgggccccccatcagcgcctcagctcccgctgtcagaggtcagcatccccccg
tcacttggggtgtgcccactggggcccgtccccctctccaaagaccagctctaccaacag
gccatggaggaggcggcgtggacgcacatgccccacccgtccgactccgagaggatcagg
cagtacctgatgaggaacccgtgccccaccctgcctttccaccaccaggtgcccccgccc
cactcggacactgtagagttctaccagaggctttccacagaaaccctcttcttcatcttt
tactacctggagggcactaaggcccagtatctggcagccaaagccctgaagaagcagtcg
tggaggttccacacaaagtacatgatgtggttccagaggcacgaagaacccaagaccatc
acggatgagtttgagcagggaacgtacatttactttgactatgagaaatggggccagcgc
aagaaggagggcttcacgttcgagtaccgttacctcgaagaccgagacctccagtga
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