Eleginops maclovinus (Patagonian blennie): 134875116
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Entry
134875116 CDS
T09869
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134875116 (vps50)
Membrane trafficking [BR:
emac04131
]
Protein recycling
Others
EARP complex
134875116 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF1059
Motif
Other DBs
NCBI-GeneID:
134875116
NCBI-ProteinID:
XP_063755614
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All DBs
Position
13:16481134..16580391
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AA seq
995 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEMIDSIEEL
YYSNDSFDMVQHELEKLPPELNLQELEEYRDTLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSASKEEFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVAHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITMDSYIPCLTDLCKALWEVMVSYHRTMQWHEEHDKQDTSLTPGD
AAAAAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLD
VISRLMQVGEEFCSSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSN
FNISQLHEFKFMGQCRSPSVSPSRQAVSSTSPAQEELSLFQQFLQEGNPFELPTEKEEET
EDVLASNGYESDELEKNVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETIRSKKKS
DYNLNKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFG
RNDMPVPSPSLPTHIGRDAGPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAV
GETAGVHGAAEDRKEKVPSPHLSQMVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQFH
LDTMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIREIM
SQHNVYVDVLLKEFEQFNKRLEDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKC
SNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSM
KQLANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctcttatggcccgacagggcctgaaaagcccccaggaaagcatg
gcagacctcagtcctgtggagaacctgaggatccccagcaaggaggagttgcgggagctg
agggagcagcccatcgacccccaggcggagcaggagatgatcgacagcatcgaggagctg
tactattccaatgactccttcgacatggtgcagcacgaactggagaaactaccccctgag
ctaaacctgcaggagctggaggagtacagagacacgctgaagagacaacaggcagcagta
tctaaaaaggttgccgatctcattctggagaaacagccggcttatgtcaaggaactggag
cgagtgacagcgttgcagaccaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgagcgcgtcgaaggaagaattcacagaagccagcttgggtcttttggccaat
cagaggaggcggcaactgctgacagggctgctgaagtccctgaggaccatcaagacgctg
caaagaacagacgtgagactcagcgagatgcttgaggaggaagactatccaggtgcgatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagc
gaattgaattccaaactacaagacactctcgaacaaatagaggagcagcttgacgtcgcc
ctgtcgaagacttgtaagaactttgatgttgcgcactacaccaaggtccagctggcctac
actctcctgggaaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacagtgttccaggtggtgctgggatacgtggaactgtgtgccggcaacgct
gataccaagttccagaagatgcagtacaaagacctttgcacgcacatcaccatggacagc
tacattccctgcctgacggatctctgcaaggcattgtgggaggtgatggtgagctaccac
cgcaccatgcagtggcacgaggagcatgacaaacaggacacctcactcactccaggtgac
gcagcagcagcagcagcagcagagtctgatgagtcggtagtggaccgcagctatgtgaag
aagaagctggagcatggactgacacggatctggcaggacgtccagttgaaagtgaaggcc
tacatcttggggacggacatgtctaactttaaatacgatgatttcatcgtggtacttgat
gtcatcagcaggttgatgcaggtgggggaggagttctgcagcagtaagtcggaggtcctg
caggagtctatcaaacgccagagtgtcaactactttaaaaattatcacagggcacgactg
gaagagctgaggatgtttctggaaaatgagacgtgggaactttgcccagtcaaatctaac
tttaacatctcccagctccatgagtttaagttcatgggccagtgtcgttctccatccgtt
tccccgagcagacaggccgtgtcctccaccagcccggcgcaggaggagctgtctctgttt
cagcagtttcttcaggagggaaacccctttgagttgcccactgaaaaagaagaggagaca
gaggatgtcctggcatccaacgggtacgagtcagacgagctggagaagaatgtgtatcaa
gactacgacagtgacagtgacgtcccggaggagctcaagcaagactacgttgacgagcag
acgggcgatgcccccctcaagagtgtgtccagagagaccataagaagcaagaaaaagtca
gactacaaccttaataaggccaacgcgccaatcctcacaaacaccaccctcaacgtcatc
cggcttgtcgggaagtatatgcagatgatgaacattctgaagccgattgccttcgatgtg
atccactgtgtgtcgcagctattcgactactacctgtatgctgtttacaccttcttcgga
cggaatgacatgcctgtcccaagcccgtctttgccaactcatataggcagagacgcgggc
cccgccagggtggtgggccctgcttgtttgtatgagtcatcgggtctgggccttatcagc
agcagactgagaaccacactgaaccggatccaggagagcctcattgacatggaggcagtg
ggggagactgcgggagtccatggagcagcggaggacagaaaggaaaaggtgccgagcccc
catctcagccaaatggtggtcctcaccaacagtgggactctttatgggctcgcacagaga
gtggtggccaccgagtctcttgtgtttctggctgaacagtttgaatcccttcagttccac
ctggacacgatgatgccggcagccaagaagcccttcctgcaacagttttattcccagacc
gtgtctacagccagtgaacttcggaaaccaatttactggattgttgcggctaaggccatc
gactacgagcaaatgttgctcttgatggccggagttaaatgggacattagggagataatg
tcccagcataatgtatatgtggacgtcctgttgaaggagttcgagcagttcaacaagcgt
ctggaggatgtttccagacacgtgcgcatcccgctgcctgtgtccaacgtcctgtgggag
cactgcatccgtctggccaacaggactctcgtagagggctacgctaatgtgaagaaatgc
agcaatgagggccgggccctgatgcagctcgacttccagcagttcctcatgaagctggag
aagctgaccgacctgcgacccattcctgataaagaattcgttgagacctacatcaaggcc
tactacctgacggagaacgacatggagcagtttatcaagaatcaccgggagtactccatg
aagcagctggccaacttggtaaacgtttgtctgggctctcacataaacaagaaggctcgt
cagaaactgctggccgccatcgatgacattgacagacccaagagatag
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