Eleginops maclovinus (Patagonian blennie): 134875328
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Entry
134875328 CDS
T09869
Symbol
nup153
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134875328 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134875328 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134875328 (nup153)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134875328 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
134875328
NCBI-ProteinID:
XP_063755928
LinkDB
All DBs
Position
13:14358783..14374522
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AA seq
1479 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQPSGIISRVTDTVKSIVPSWLTKYFKNEDAPEGGG
AVLGTEQNCQTPPPPNGSEEGPPLLDGRDSPEPSTSNTEPSTSRASLNFQEYVLSRPPLS
RSHLHFPPLDASSSILGAPSNLFSQPSTSSAPGPFSTGFSLVKEIKDNLSQHEDDNISTT
SGFSSRASEKDVPTSKTASLPQLWSPETDRTHSGSHHAHQSSLKRPAFNLSVFGTSSNSS
LNSTVLNSSQLGDSLYYPGKTMYGGAAAVRSTRGRPGTPYQAPVRRQIKAKPAGVQPCGV
TSATARRILQSLERMSSPLADARRIPSAASSPLSASMDGTNLDGSHNQPKKKRREPSLPP
VQKLMVPAAASVSGNRSVSFRPTLTPGGVSRTLDKTPRDTPTRQSPQLPEATPGPSKSTM
GSSGPAYPLSSTPAASGAGSGGGKMKRERMSARPSSKRVDEDEMAELPDLPTVSLPIHTL
PSFSFTSPLPPPTTTSTTISTAPTTTPMNPTKETNKELPTASTPPCVPFTFSSPIVMATA
ASPPSLSPLAEFTFSAPVAKLGPSMSNGNLASPILAVKLPTSNSTEDFEGPFKPAKTLKQ
GSVLDLLKAPGFASPVARTSPTPERAPQLSSTQSTAPSFSSTTTTTSSLPSIGFGAGFKS
PPGWSCDVCMVQNKPSDTKCVCCCAPQPKSMDSKPLTATSDVVESSGSSTTSTSAGFGTM
FSKPAGTWDCDTCLVLNKPEAVKCVACETAKPGTGLKPSATLPSAFSAVKTVSPPTALVS
TGFSGFGDKFKKAEGAWECDTCLVENKAEVTKCVACSSAKPGVSAAASSATIAPVIGFGD
AFKMPEGAWECDVCLVQNKAADVQCVXCQTAKPGAIVEPKAFGSAFGSSAGGTSGTTSGG
FKFGTTDSTLGSGSGGFKFGGSFTESSSSSSGGFKFGVQSETTSNDTTASSGFKFGSSSE
GFKIGVASSDDKNSDPPVAGSGFKFGASGGIMFGTGSSSAESVSSKGGFSFGLSKPEEKT
PDTTLSSQEKSESAASSNDTTSTNSTTTSSKGSVFGRLGERGSTTPTPQGGPTFGSLQAD
KEPAAPAFTFGKPEENKEAPTSLAPSGFLFGAASKDAEAAPPPGATGGFSFNKPSAQTEQ
PPPTFNFGKPADKSETSTAEAPNPSFAFGQSAADSSAAPKPAFSFMSGNPIVNSTTSTST
TPTPSLFGATTTSSSSSSSSTQAPAPFAAPSTLMFGQPAATATDAPPAKAFLFGQSQDSQ
PLAPSAANLNSISSPAQPFLFGAPAAATAAAPPPAAAAAATPTFGFGTAAPSAASSAAPS
AAPSPFAFSSAPSGGFGANQTPSFGSSFGSPFTASPSQPPAFGAKPNAAPVFGQQNSSTP
VFGAAANSAPGGGFQFGGASAFGATNNASGGGVFTFGGGPAASPAPPANPSIPPQAPGGG
FNFSQPPAFNMGSKTFTAPPVGQPAIAGRKIKTAVRRRK
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgggtggagggaaaattagaagcaggagatatcacatcgcctctaaacct
tacgccaagagtaaacagccgtcaggcatcatcagtcgagtgacagacacagtaaagagc
atcgttccttcctggctgacaaaatacttcaagaatgaagatgctcctgaagggggagga
gctgtactggggacggagcagaactgccagactcctcctcctcccaatggcagcgaagag
ggtcctcctctgcttgatggacgcgattccccagagccaagcaccagtaacacagagcct
tcaaccagccgggcttccctgaactttcaggagtatgtgctttctcgaccacctctgagt
cgttcccatctccactttcccccgctggatgcctcttcttcgatcctgggggcccccagc
aacctcttctcccaaccctccacctcctcagcccctggacccttttccacaggcttctcc
ttggtcaaagaaatcaaggacaacctatcgcagcacgaagatgataacatctccaccact
agcggcttctcctcccgcgcctcagaaaaagatgttcccacttccaaaacagcatcactt
ccacaactttggtccccagagacggacagaacacactctggctctcatcacgctcatcag
tccagtctgaaaaggcctgctttcaacctgtctgtatttggaacttcctccaattcgtca
ttaaacagcacagtgctgaactccagccagctcggagattccctctattaccccgggaag
accatgtatggtggggcagcggcagtcaggagcactcgaggtcgccccggaacaccgtac
caggccccagtgaggagacagatcaaggccaagcctgctggggttcagccctgtggggtg
accagcgccacagccagacgcatccttcagtccttggagcgcatgtccagtcccctcgct
gatgcaaggagaatcccgtcagctgcctcgtcccccctttcagcatcaatggatggtaca
aatctagatggttcacataatcagccgaaaaagaaacgtagggaaccctccctccctccg
gtgcagaagctcatggttcctgctgcagcgtcggtgtcaggaaaccgctccgtgtctttt
aggccaactctgactcctggaggagtgagccgaactctggacaagacccccagagacacg
cccacaagacaatcaccgcaactacctgaagcaaccccaggtccatcgaaaagcacaatg
ggttccagtggcccggcctatcctctgtccagcacgcctgcagccagcggcgcgggatct
ggaggggggaagatgaagcgagagaggatgagtgcacggccttcctctaaacgcgttgat
gaggacgagatggctgagctaccggacctaccaactgtttcacttcccatccacaccttg
ccttccttcagctttacctcccctctcccacctcccacaaccacctccaccaccatcagt
acggcccccaccaccacgccaatgaatcccactaaggagacgaataaggagctaccaaca
gcctcgacccctccctgtgtaccttttacattttcctcccccatagtcatggcaactgct
gctagtcctccttccctttcccccttagctgaattcacttttagtgcacctgtagcaaag
ttaggtccatccatgtcaaatgggaacctggcctctcccattctcgcagtgaaattacca
acaagcaacagcacagaagactttgaaggacctttcaaaccagccaagaccctgaagcag
ggcagcgtgctggatcttctcaaagcacctggctttgcttctcctgttgctcggacctcc
ccaaccccagaaagagctccgcagctgagctccacacaatcaacagccccctccttctcc
tccaccactacaaccacctcctccctcccatcgatagggtttggcgctgggttcaaatcc
ccaccaggctggagctgtgatgtctgcatggtgcagaacaagccatcggacaccaagtgt
gtgtgctgttgtgccccacagcccaaatctatggacagtaaacctttaacagccacctcg
gatgtggttgagagcagcggctcctccaccacatcaacctctgccggttttggcacaatg
ttctccaaacccgcaggaacctgggactgtgatacgtgtctagttctaaacaaacctgaa
gcagttaagtgtgtggcctgcgaaacggccaaacctgggacagggcttaaaccctcagca
actcttccttctgcattctcagctgtaaagactgtatccccgcccacagccctcgtctct
acagggttttctggatttggagacaagttcaaaaaagctgagggagcatgggaatgtgat
acatgtttggtagaaaacaaggcagaggtgacaaagtgtgtggcctgtagcagcgccaaa
ccaggagtttctgcagcagcctcttcagccaccattgctccagtgattggctttggagat
gcgttcaagatgccggagggtgcctgggaatgtgacgtctgtctagtgcagaacaaggct
gctgatgtacagtgtgtgngctgtcagacagccaaacctggagctatcgtggagcccaaa
gcttttggttcagctttcggttcgtcagctggtgggacttcaggcaccacttctggagga
tttaagtttggcacaacagacagtaccttgggttctggatccggaggtttcaagtttgga
ggctcatttacagagtcctcctcttcatcgtcaggtggattcaaatttggagtccaatca
gaaaccacatctaatgacactactgcctcctcagggtttaagtttggcagctcatctgag
ggctttaaaatcggggttgcctctagtgatgacaaaaactcagacccgcctgtcgcaggt
tctgggtttaagttcggagccagcggtgggataatgtttggaaccggatcctctagcgca
gaaagtgtctcctctaagggcggcttcagctttggactttcaaaacccgaagagaaaaca
cctgacaccaccttgtcttcacaagagaaaagtgaaagcgcagcatcatcaaatgacacc
acatccacaaactcaacaacaacctcaagcaaggggtctgtatttgggagattgggcgag
cgaggttcgacgacccccacaccacaggggggccccacgtttggttctttacaggcagac
aaagagccagctgctcccgcctttaccttcgggaagccagaggaaaataaggaagccccc
acctccttagctccatccggcttcctcttcggcgcagctagtaaagatgcagaggctgca
ccacccccgggcgccactggggggttctccttcaacaagcccagtgctcagacagaacaa
cctccaccgacctttaactttggcaagccagcagacaagagtgaaacatctactgcagag
gccccgaacccgtctttcgcatttggacagagtgccgcagactcctctgctgctccaaaa
ccagcattttcctttatgtctggcaatcccatcgtcaactccaccacctctacatccacc
accccgacgcccagtctgttcggcgccaccaccacaagcagcagcagcagcagcagctcc
actcaggctcccgctccctttgctgctcctagcactttaatgttcggtcagccagctgcc
accgccactgacgctccccctgctaaagccttcctcttcggccagagtcaggacagccag
cctctggcaccgtcagcggccaacctgaactccatttcatctcccgctcagcccttcctc
ttcggtgctcctgctgctgccaccgctgctgctcctcctcctgctgctgctgctgctgct
actccaaccttcggctttggaacggcagcgccctctgctgcttcctcagcagctccctct
gcagctccatctccatttgcgttcagctcggccccctctggtggattcggggccaaccag
actccttcattcggttcatcctttggatcgcccttcacagcgtcaccctcccagccccca
gcgttcggagccaaacccaacgccgccccggtgtttgggcagcagaacagctccacacct
gtctttggggcggctgctaattctgctccaggtggaggcttccagtttggaggagccagt
gcatttggagccacaaacaacgcctcaggaggaggagtgtttactttcggaggagggcct
gcagcttccccggcccccccagccaacccctccatcccaccccaggcccctggaggtgga
ttcaacttttcacaaccccccgcattcaatatggggtcaaaaaccttcaccgcccctcct
gttggacagccggcaattgctgggcgtaagatcaagacagcggtgcggcgcaggaagtaa
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