Eleginops maclovinus (Patagonian blennie): 134875445
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Entry
134875445 CDS
T09869
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134875445 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134875445 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134875445 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
emac00535
]
134875445 (col9a2)
Proteoglycans [BR:
emac00535
]
Extracellular matrix (ECM) proteoglycans
Others
134875445 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134875445
NCBI-ProteinID:
XP_063756095
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All DBs
Position
13:complement(18511211..18527701)
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AA seq
691 aa
AA seq
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MAALSDLLKTWVILQTLCLALAQVRGPPGPQGQSGPPGPSGTPGSDGIDGEKGPPGPPGP
PGQKGDSGEPGPNGVPGENGIDGLIGAKGDRGPFGNPGQKGQPGPTGEPGLPGPGLPGLA
GAPGPIGLPGEIGVTGPKGVMGSSGASGLPGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRAGILGEPGSIGKSGPRGEIGISGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPSGYKGINGPVGIPGPPGEEGPKGPPGEAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGLAGMPGAPGPQGHAGLPGSPGTKGGPGANGEPGPRGHV
GMQGASGPLGEPGVPGEAGMEGVPGPKGDRGQRGAVGPQGVVGKPGSKGERGPMGIPGAQ
GLGGTKGDKGFQGKVGSKGDDGDPGVEGLAGEKGEKGMSGEPGPKGQQGIRGDTGHNGPT
GDSGKPGDLGPSGLPGPRGLNGERGVPGMSGISGPPGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGSPGSQGPHGSPGSRGIPGMIGGPGQVGNTGLKGKR
GAKGDRGDPGKPHPGAPGPPGIPGPPGVDGVARDGRHGERGPQGSAGEAGYPGKAGHPGL
LGYCEAAMCLAASAYTSPRLQEAGRIKGPNI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctccgacttgttgaagacctgggttattctgcagaccttgtgcctggct
ctggcccaagtgaggggtccacctggacctcagggccagtccggcccaccaggcccctcc
ggtacccccgggtcagacggcattgatggagaaaaaggacctcctgggccccccggtccc
ccaggtcaaaagggagattcaggagagccaggtcccaatggagtaccaggagagaacggc
attgatggtctgattggagcaaaaggggatagaggtccttttggaaaccctggccagaag
ggtcaacctggacccactggggaacctggtcttcctggacccggccttccaggactggct
ggcgctccagggccgatcggtcttccaggtgaaattggagtaacgggaccaaagggtgtc
atgggatcatctggagcttcaggacttcctggacctcctggcaagccagggcctccaggg
aagttcatcggtggagaggagggaagtgcagacttccagtgccctcttaactgtccggct
ggacctaaaggcccccagggactgcagggagtcaagggacacaaaggacgtgccggaatt
ctcggagagcctggcagcattggaaaatcgggtcccaggggagaaattggcatctctggg
gagcagggcattccaggacctccgggtccgatgggtctgagaggttacccaggaatgatg
ggtcctaaaggggaagccgggcccagcggctacaagggaatcaacggacctgtaggaatc
cccgggcctcctggtgaggaaggacccaagggaccacctggagaggcaggtgacaaggga
gacaagggcagccgaggtatccaaggcccacagggcgcggtaggcaagaagggagagaat
ggtctgccgggcattgacggaaaggacggcacacctggtattcctggaatcaagggcggc
ccgggcctggctgggatgcctggcgctcccggtcctcaggggcatgcgggattacccggc
agcccagggacaaaaggtggacccggagctaatggcgagcctggacctcggggtcacgtt
ggcatgcaaggcgcctcgggacctctgggtgagcctggtgttcctggcgaggccggtatg
gaaggcgttcccggacctaagggcgacagaggccagcggggagcagtgggtccacaggga
gtagtcggcaagcctggaagcaaaggagagagaggaccaatgggtattcccggtgctcag
ggtctcggtggaaccaagggagacaagggtttccaaggaaaagtcgggtcaaagggagat
gatggtgaccccggtgttgaaggattggctggcgagaaaggtgaaaagggtatgtctggt
gaacccgggcccaaaggacagcaaggaatcaggggtgacacgggacacaatggacccact
ggagactccggtaaacctggagacctagggccctcaggactgcctggccccaggggattg
aacggagagcgcggagtacccggcatgtccggcatttcagggccaccgggacgcgatgca
tctgaccagcatatcatcgaggtggtgctgaagatgttgcaggagaggctagctgctgtt
gcggtgagcgccaagagggcggtgctgggtggagcaggtgtgatgggacctcctgggccc
cctggacctcctggatcacctggttctcagggcccacatggctcacccggatcccgtggc
attccaggcatgattggagggcctggacaggtcggaaacaccggactcaaaggaaagaga
ggagctaagggagacagaggagatcctggtaaaccccatccaggagccccaggaccccca
ggaataccaggtcctcctggtgttgatggtgtggctcgggacggtaggcacggcgagaga
ggaccccagggatcagccggagaggccggttaccccggtaaggcgggtcatccgggtctc
ctaggctactgcgaggcggccatgtgcctcgctgcatcggcgtacacctccccgagacta
caggaggccggccgaatcaaaggacccaatatttag
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