Eleginops maclovinus (Patagonian blennie): 134876345
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Entry
134876345 CDS
T09869
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134876345
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134876345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134876345
NCBI-ProteinID:
XP_063757412
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All DBs
Position
14:complement(8444343..8581223)
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AA seq
672 aa
AA seq
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MEMSEARGASKCVEKMEKEVAPQKRQQYRTTVLNIISSLCSVASIAFCILLSINTADVKN
RVVDLESGNDEHTFIRAPGYSMDDFNSLIEQRVDELLSQRSYEQFVKIRTARQASPECSC
PPGPPGKRGRRGRNGETGPPGPPGLKGDKGDQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGVPGLAGDPGQPGDIGLIGPEGPPG
QKGFIGPPGNPGVDGLKGDVGIPGLDGVPGAKGEMGERGEKGDLGEDGPKGDLGEKGDAG
SSAAGIKGEPGEPGRGGTKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGERGD
HGPQGKGERGEIGPMGPKGSQGEGGTPGNKGSKGETGDKGLVGSVGPKGPPGQKGDQGAT
EIVDYNGNIQEALQKITTITVTGPPGPPGPIGPEGVKGDRGMPGLPGLDGERGYKGSKGD
MGMPGASGEKGTTGLPGLPGVNGMRGEKGDAGLPGLQGSSIIGTPGPPGPHGPPGPMGPH
GFPGAKGESGLHGVKGIRGETGHKGDRGPLGLPGASGLDGKPGIRGQDGPAGPAGPAGPK
GDIGERGASGDPGPRGPYGLPGSAGTPGLDGEKGKKGKKGPKGEKGEQGAPGLDAPCPLG
PDGLPMPGCWQK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtcagaggcaagaggagcatctaagtgcgtggaaaaaatggagaaagaagtg
gcgcctcagaagagacaacagtaccgcacaacagtgctgaacattatctcgtctttgtgc
tcagtggcgtccatcgccttttgcattctcctgagcattaacacagctgacgtgaagaac
cgggttgtggatttggagagtgggaatgacgagcacacctttatccgagccccgggctac
tccatggatgattttaattcattgattgagcaacgcgtggatgagctgctctctcagcgc
tcctatgaacagtttgtcaagatccggactgccagacaagcatcacctgaatgcagctgc
cctccaggacctccgggaaagcgaggaagaagaggccgcaatggagaaactggacctcct
ggccctccaggtctcaagggtgataagggggatcaaggcgaccagggaccacggatggtc
ttccctaagatcaatcatggctttctttccgctgaccagcagctcataaagcggcgtctc
attaagggagatcaggggcaagctggaccacctgggcctccggggccaccgggtcctcca
gggccgagggggcctccaggggacacggggaaagacggacccagaggtgtacctggtcta
gcaggggatccaggccagcctggagatataggattgatcggacctgaggggccaccaggg
cagaagggttttatcgggcctcctggaaatccaggtgttgatggactgaagggggatgtt
ggcatcccaggattggatggagtccccggcgctaagggtgaaatgggagagcgaggtgaa
aagggcgatttgggtgaagacggaccgaaaggggatttaggagagaagggagatgcaggc
tcttctgcagcaggcatcaagggagaacctggtgagcctggacgaggtggaacaaaggga
gagccaggacttccagggctgcctggactcccagggataaagggtgagcccggattcctc
gggccccagggagaaccagggctcccaggtctcccaggaactaagggtgagagaggcgac
cacgggccacaaggaaagggagaaagaggagaaattggacccatgggaccaaagggttcc
caaggagagggaggtacacctggtaataaagggtcaaagggtgagactggagataaagga
cttgtgggatcggttggcccgaagggcccccccggccagaaaggagaccaaggagccaca
gaaatcgtcgactacaatggaaacattcaggaggctttacagaagattaccactattaca
gtaacgggtccacctggaccgcccgggcccataggaccggagggggtgaaaggggaccgt
gggatgcctggcctccctggactcgatggagaaagaggctacaaaggctctaaaggagac
atggggatgcccggagcttcaggggagaaaggaacaactggtttacctggcttacctggt
gtaaacgggatgagaggagaaaagggagacgcaggtctgcctggtcttcaaggttcttca
atcatcggcactccagggcctccagggccccatggacccccaggacccatgggtccccat
ggtttccctggagcaaagggggaatctggtttgcacggtgtgaagggaatccgaggagag
acgggacacaaaggggaccgcgggccgcttggtcttcccggagcatccggcttggacggc
aagcccggaattaggggccaggacgggcctgcggggccagctgggccggcggggccgaag
ggcgacataggtgagagaggagcgtcaggcgatccaggaccaaggggcccttacggactt
cctggatctgctggaaccccaggcctggatggggagaagggaaagaagggcaaaaaaggg
cctaagggcgagaaaggagaacagggggcccctggattagatgcaccctgcccattgggc
ccagatggattaccaatgcctggatgctggcagaagtga
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