Eleginops maclovinus (Patagonian blennie): 134876530
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Entry
134876530 CDS
T09869
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134876530 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134876530 (hbs1l)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134876530 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
134876530
NCBI-ProteinID:
XP_063757571
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Position
15:complement(10874561..10898308)
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AA seq
698 aa
AA seq
DB search
MSRHRNVRGYNYDEDFDDDDVYGQSVDDDYCISPATANQFIYSRQERQAPREEPLEEEEC
EDDVPMSPTTSHNLDPLEQAKLYSCLDHMRTVLGDAVQDSVLTQAAISCGFDPQKALDAV
LSEDAKTAPVTKSTNVETASAAIASQEKAQLPQRTKKEAVAEKAKSRDVAHNKLDSEVVP
KVARMTVSGKKQTMGFDVPSVVNGGVGTPVRRGGSPESSAAASEATPKRPETPSKGSNGD
EPSTVPTPGRSSGKARQTINIKEELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGN
VNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVVTLMDAP
GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVN
KMDQVNWQQQRFQDITSKLGHFLKQAGFKDSDVYYIPSSGLSGENLTTRSSVSELTSWYS
GPSLMEQIDAFKAPQRSVEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGERILAMPPN
ETCTVKGITLHDEPLDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFRARIL
LFNIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVVKKKPKCLGKGMNAIVEIQ
TQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgttcgaggttataactacgatgaagactttgacgatgatgac
gtgtatggccagtctgtggatgatgactactgtatttcaccagcaacagcaaatcagttc
atctactcgcgtcaagagaggcaagcaccaagggaggagccgttagaagaggaagaatgt
gaagatgatgtacccatgtcccctaccaccagccacaacctagaccctcttgaacaagcc
aaactgtattcctgtctggaccatatgcggactgtgttaggagatgcagtgcaagactca
gtcctgacccaggcagccataagctgtggattcgacccacagaaggcactggatgcagtc
ctgtctgaagacgctaaaacagccccagttaccaaaagcaccaacgtagagacggcttca
gcagcaatagcaagccaggagaaagcgcagcttccacaaagaaccaagaaagaggctgtc
gccgagaaagctaaaagcagagacgtggctcacaataaactggactctgaagtcgtcccc
aaagtggcccgcatgactgtttctggaaagaagcagaccatgggcttcgatgttcccagt
gtggtgaatggtggcgtcgggacccctgtacgccgtggtggcagcccggaaagctccgca
gcagcctccgaagccacgcccaagcgtccagagactccatctaaaggttcgaatggagac
gagccctccacagttccaaccccgggacgctcctccggaaaggcccggcagacgatcaac
atcaaggaagaactggagaagaggcagggtggcaaacctctgttaaatttggtggttata
ggtcatgtggatgcaggtaagagcactctgatgggccacctgctgtatctgctgggcaac
gtcaacaagcgcaccatgcacaagtatgagcaggagtcaaagaaggcgggaaaggcctcc
ttcgcctatgcttgggtcctggatgaaactggcgaggagagggacagaggtgtgacgatg
gatgtgggcatgaccaagtttgaaacggattctaaggttgtgactctaatggatgcccct
ggacacaaagacttcatccccaacatgatcacaggagctgcacaggccgatgtggcggtg
cttgtggtggatgccagccgaggagagttcgaggcgggtttcgaagcgggcggtcagaca
agagaacacgccctattggtgcgctcgctcggcgtcactcagctcgctgtagctgtcaac
aagatggaccaggttaactggcaacaacagcgtttccaagacattacttccaaacttggc
cattttctcaagcaggcaggattcaaggactctgatgtttactacatccccagcagtggc
ctgtcaggagagaacctcaccaccaggagttcagtgtcggagctcacatcgtggtactcc
ggccccagcctgatggagcagattgacgccttcaaagcccctcagagatctgtagagaaa
ccgttcagactgtgcgtttccgatgtgttcaaagaccagggttcaggcttctgtgttacc
gggaagatcgaggctggttacattcagaccggagaaagaatactggctatgccccccaat
gaaacatgcactgtcaaaggtattactctccacgatgagcctctggactgggctgcagca
ggagaccatgtcagcctcaccgtcaccggcatggacatcatcaagatcaatgtgggctgt
gtgttctgtgatcccaaggagcctatacgagtgtgtactcgattcagagcccggatcctt
ctcttcaatatcgaggtccccatcacacaaggcttcccagtattgctgcattaccaaaca
gtgagtgagccggccaccattaggaaactgataagtgttctacacaagagcagcggtgag
gtcgtcaagaagaagccaaagtgtttgggtaaaggtatgaatgccatcgtagagatccag
acgcagaggccggtgtcattagagctgtacaaggactacaaggagctcggccggttcatg
ctcagatatgtgggctccaccattgccgcaggggttgtcacagagatcaaagaatga
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