| Entry |
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| Symbol |
fdft1
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| Name |
(RefSeq) LOW QUALITY PROTEIN: squalene synthase
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| KO |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Pathway |
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| Module |
| emac_M00101 | Cholesterol biosynthesis, FPP => cholesterol |
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
134876661 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:emac01006]
134876661 (fdft1)
Enzymes [BR:emac01000]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
134876661 (fdft1)
Prenyltransferases [BR:emac01006]
Terpene biosynthesis
Squalene/phytoene synthase
134876661 (fdft1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
15:complement(9741028..9748703)
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| AA seq |
416 aa
MDILKSLGHPEEIFNLFKFKLGGCSTVMRKLDYESMSESLRTCYLYLNQTSRSFAAVIQA
LDGELRHAVCIFYLVLRALDTVEDDMTIPLDKKVPMLNDFHTYLYQNEWCFTESQEKDRQ
VLADFPTISVEFRNLAKEYRDVISDICHRMGVGMAEFLEKKVGSMKEWDLYCHYVAGLVG
IGLSQLFSASQLEDPEVGRDTELANSMGLFLQKTNIIRDYLEDIQVGRAFWPQEAWSQFA
GRLEDFAQPEKLESALSCLNLLVTDALRHVPDVITYLSRLQNQSVFNFCAIPQVMAIATL
STCYNNPMLFQGVVKIRKGQAVTLMMEATNMRAVQTIIAQYNQEILLKVSHTDPTRDNTL
RILALIEKSALSQSNLPSRTAHLSPMYLSAAMLLAALSWQYLSTTTALDTGDMKGQ |
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| NT seq |
1251 nt +upstreamnt +downstreamnt
atggacatccttaagtcactgggccacccggaagagatattcaacctatttaagtttaaa
ttggggggatgcagcaccgtaatgcgaaagttggattatgagtccatgagtgagagtctg
cggacatgctacctgtatctgaaccaaaccagtcgcagttttgcagctgtcattcaagcg
ctggacggggagttgagacatgcagtttgtattttctacctggtgctgcgagcgttggac
acagtggaggacgacatgacgatccctttggacaagaaggttcccatgctgaatgatttc
cacacctacctgtaccagaatgagtggtgcttcaccgagagccaggagaaagacagacag
gttctggcagatttccccacgatatcagtggagttcagaaacctcgctaaggaatatcga
gacgtcatctcagatatctgccaccgtatgggagtaggaatggctgaattcctggaaaag
aaagtgggatccatgaaggagtgggacttgtattgccattatgtggcggggctggttggt
atcggtctgtctcagctgttctctgcgtcccagctggaggaccccgaagtggggcgcgat
accgagctagctaactccatgggcctgttcctccagaagacgaacatcatccgagattat
ctggaggacatacaggtgggacgcgccttctggcctcaagaggcttggagccagtttgct
ggtcgtctggaggactttgcgcagcctgagaagctggagtcggctctctcctgtctcaac
ctgctggttactgacgctctgcgacatgtccctgatgttataacctacctgtcccgcctg
caaaaccagagcgtcttcaacttctgcgccattccacaggtaatggcaatagctacactg
tcgacttgctacaacaaccccatgttattccagggagtggtgaagatcaggaaggggcag
gcggtcacgcttatgatggaggccaccaacatgagagccgtgcagaccatcatcgcccag
tataaccaggagattttactgaaggtctcccacacggacccgacccgggacaacacgctg
cgcatcctggctttaatcgagaagtctgccctttcacagagcaacctgccctcaaggacc
gcccacctgtcgccaatgtacctgtctgctgccatgctgctagctgctctcagctggcag
tacctcagcaccaccacggcactggacaccggggacatgaagggacagtga |
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