Eleginops maclovinus (Patagonian blennie): 134876661
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Entry
134876661 CDS
T09869
Symbol
fdft1
Name
(RefSeq) LOW QUALITY PROTEIN: squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac00100
Steroid biosynthesis
emac01100
Metabolic pathways
Module
emac_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
134876661 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
emac01006
]
134876661 (fdft1)
Enzymes [BR:
emac01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
134876661 (fdft1)
Prenyltransferases [BR:
emac01006
]
Terpene biosynthesis
Squalene/phytoene synthase
134876661 (fdft1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
134876661
NCBI-ProteinID:
XP_063757785
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All DBs
Position
15:complement(9741028..9748703)
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AA seq
416 aa
AA seq
DB search
MDILKSLGHPEEIFNLFKFKLGGCSTVMRKLDYESMSESLRTCYLYLNQTSRSFAAVIQA
LDGELRHAVCIFYLVLRALDTVEDDMTIPLDKKVPMLNDFHTYLYQNEWCFTESQEKDRQ
VLADFPTISVEFRNLAKEYRDVISDICHRMGVGMAEFLEKKVGSMKEWDLYCHYVAGLVG
IGLSQLFSASQLEDPEVGRDTELANSMGLFLQKTNIIRDYLEDIQVGRAFWPQEAWSQFA
GRLEDFAQPEKLESALSCLNLLVTDALRHVPDVITYLSRLQNQSVFNFCAIPQVMAIATL
STCYNNPMLFQGVVKIRKGQAVTLMMEATNMRAVQTIIAQYNQEILLKVSHTDPTRDNTL
RILALIEKSALSQSNLPSRTAHLSPMYLSAAMLLAALSWQYLSTTTALDTGDMKGQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacatccttaagtcactgggccacccggaagagatattcaacctatttaagtttaaa
ttggggggatgcagcaccgtaatgcgaaagttggattatgagtccatgagtgagagtctg
cggacatgctacctgtatctgaaccaaaccagtcgcagttttgcagctgtcattcaagcg
ctggacggggagttgagacatgcagtttgtattttctacctggtgctgcgagcgttggac
acagtggaggacgacatgacgatccctttggacaagaaggttcccatgctgaatgatttc
cacacctacctgtaccagaatgagtggtgcttcaccgagagccaggagaaagacagacag
gttctggcagatttccccacgatatcagtggagttcagaaacctcgctaaggaatatcga
gacgtcatctcagatatctgccaccgtatgggagtaggaatggctgaattcctggaaaag
aaagtgggatccatgaaggagtgggacttgtattgccattatgtggcggggctggttggt
atcggtctgtctcagctgttctctgcgtcccagctggaggaccccgaagtggggcgcgat
accgagctagctaactccatgggcctgttcctccagaagacgaacatcatccgagattat
ctggaggacatacaggtgggacgcgccttctggcctcaagaggcttggagccagtttgct
ggtcgtctggaggactttgcgcagcctgagaagctggagtcggctctctcctgtctcaac
ctgctggttactgacgctctgcgacatgtccctgatgttataacctacctgtcccgcctg
caaaaccagagcgtcttcaacttctgcgccattccacaggtaatggcaatagctacactg
tcgacttgctacaacaaccccatgttattccagggagtggtgaagatcaggaaggggcag
gcggtcacgcttatgatggaggccaccaacatgagagccgtgcagaccatcatcgcccag
tataaccaggagattttactgaaggtctcccacacggacccgacccgggacaacacgctg
cgcatcctggctttaatcgagaagtctgccctttcacagagcaacctgccctcaaggacc
gcccacctgtcgccaatgtacctgtctgctgccatgctgctagctgctctcagctggcag
tacctcagcaccaccacggcactggacaccggggacatgaagggacagtga
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