Eleginops maclovinus (Patagonian blennie): 134876871
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Entry
134876871 CDS
T09869
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134876871 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134876871 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
emac04990
]
134876871 (snx1a)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Macropinocytosis
Sorting nexins
134876871 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
emac04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134876871 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
Motif
Other DBs
NCBI-GeneID:
134876871
NCBI-ProteinID:
XP_063758137
LinkDB
All DBs
Position
2:5565821..5578149
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AA seq
949 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDVLDSEEVGGRDSYEDDENDLFMSASNPPLTDMDSLLSPSSE
PSNVLMKPPVDLMDDPLIEPVSFQTENTPSSEVVSEPSDDFVDLTNNITDSPDEKDTAES
PVADAEGDTSEIPLDEPTEEFEDIFGSEAEAPKEEVVEADVTVEETATDKGGDASRVTVP
PVDEKTRSDEEQEAIATSTDPIINLSDDLQAVETEQPLPASLAFVDPLDDLLSDDSPATD
TQQPPPASVTFADPLVDVISDDSPAAETQELQRPKGVFIESLVEGISDDSPAAETQEPPR
ASEAFFDPLDDLLSDVSPAAEKQQPLPASNTFVDPLDDLFSDNTPAAETHQPPPASKAFV
DPLVDLLSVAAPAAQAKITTPATVDLFDDEGSDIFTEARQTKPAKQQQQSLFGGEPDEDL
FDEPLGASSKKAVSTEPRDKPVKAKAASTDVSNMGGPLQDSTPAEPADIFSEEAVTTVPM
AKNTSAVSSKSNGVHSEEETDIFAEATVELSLDSPREERKKDVTVAPSASAAPLLSAAAS
LVKPQAAALEEVHTNTHIISQNENPTEDKFEIFVSVKDPEKVGDGMNAYMGYKVTTQTQM
PMFRNKTFTVRRRFSDFLGLYEKLSEKHGPNGFIVPPPPEKSILGMTKVKVGKEDSSSAD
FVERRRAALERYLQRVVNHPSLLQDPDVREFLERDELPRATSTQALSGAGFLKMINKATD
AVSKMTIKMNESDVWFEEKLQEVESSDQHFRKLHALVESLVVHRKELSLNTAGFAKSTAM
LGSAEDNTALSRALSQLAEVEDKMEQLHQEQAANDTFCFAELIADYIRLLGAVRGSFDHR
MKAWQRWQDAQTALQKKRETEAKLLWANKPDKLQLAKEEIAEWEAKVTQYERDFERVSAT
VRKEVVRFEKEKARNCKREIINYLECLLQSQQQLIKYWEAFLPEAKAIA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcggagcgtagtcctcctccgtttcccgactccgaggaccaagatgtg
ctggactccgaagaagttggaggccgagacagttatgaagacgacgagaacgatctcttc
atgagcgcaagcaaccctccactgacagacatggacagcctactgtctccttcgagtgaa
cccagcaatgttttaatgaagcctcccgttgacctcatggatgatcccttaattgagccc
gtcagcttccaaacagaaaacacaccatccagtgaagtcgtgagcgaaccctcggatgat
tttgtcgacctaacaaacaacatcaccgactctccggatgaaaaagacacagctgaaagt
cccgttgcagatgcagaaggggacacatctgaaatccctttagatgagcccacggaggaa
tttgaagacatatttggaagtgaagccgaagccccgaaagaggaagtagtagaagcagat
gttactgttgaagaaacagcaacggataaaggtggagatgccagtcgtgttacagttcca
cctgttgatgagaaaacaagaagtgatgaggaacaggaagcaatagcaacttccaccgat
ccaattatcaacctcagtgatgatttgcaagccgttgaaacagaacagccactacctgcc
agcttagcattcgttgaccctttggatgaccttctaagtgatgattcgccagccacggac
acacaacagccaccgcctgccagcgtcacatttgctgaccctttggttgatgtcatcagc
gatgattccccagccgctgaaacacaagaactacagcgtccaaagggagtattcattgaa
tctttggttgaaggcatcagtgatgattccccagctgctgaaactcaagaaccaccgcgt
gccagcgaagcgttctttgaccctttggacgaccttctcagtgatgtttcgccagccgct
gaaaaacaacagccactgcctgccagcaacacattcgttgacccattggatgacctcttc
agtgataataccccagccgctgaaacacatcagccaccgcctgccagcaaagcgttcgtt
gaccctttggttgacctccttagtgttgctgcacctgctgctcaagccaaaataaccaca
ccggcaacagtcgatctgttcgacgacgaagggagcgacattttcacagaagcccggcag
accaagcctgccaagcagcagcagcagagccttttcggcggggaacccgacgaggatctg
ttcgatgagccgctaggggcctcgtcaaagaaagctgtgagcacggagccgagggacaaa
cccgtcaaagccaaagctgcttctactgatgttagcaacatgggggggcctctgcaggac
agtactcctgcagaacctgctgatatcttcagtgaggaagccgtcaccaccgtgcccatg
gccaaaaacaccagcgccgtctcctccaagagcaatggagtccactcggaagaggagacg
gatatatttgcagaagccacagtggagctttccctcgacagtccgcgggaagagagaaag
aaagatgtgacagtcgcaccgtctgcgtccgccgcccccctcctgtcggctgctgccagc
ctggtgaagccacaagctgctgccctggaggaggtacacacaaacacacacataatatcc
cagaatgaaaatcctacagaagacaaatttgagatctttgtgtccgttaaagatccggaa
aaagttggggatggaatgaacgcctacatgggctacaaagtaaccacacagacccaaatg
ccgatgttccgcaacaagacgttcacagtgaggcgacgcttcagcgacttcctcggcctc
tacgagaagctctctgaaaaacatggaccaaatggattcatcgtgcccccgcctccagag
aagagcatcctgggtatgacaaaggtgaaggtgggaaaggaagactcttcatcagcagac
tttgtggagagaagaagagcagctctggagaggtatctccagagggtggtaaatcacccg
tcactcctccaggatcctgatgtcagagagttcctggagagagatgaattgcccagagcg
acgagcactcaggctctgagcggcgccggcttcctgaaaatgatcaacaaagcaacagat
gctgtcagtaaaatgaccatcaagatgaacgagtcagacgtgtggtttgaggagaagctg
caggaggtggagtcttcagatcagcacttcaggaagctccacgcgctggtggagtctctg
gtcgtccaccggaaagagctgtcgttaaacacagccggcttcgctaagagcacggcgatg
ctgggcagcgcagaggacaacaccgccctgtcccgagctctgtcccagctggcagaggtg
gaggacaagatggagcagctgcaccaggagcaggccgccaacgacaccttctgcttcgca
gaactcatcgcagattacatccgcctgcttggagccgtgagggggtcgtttgatcaccgg
atgaaggcgtggcagcgctggcaggacgctcagaccgctctgcagaagaagagagagaca
gaggccaaactgctgtgggcgaacaaacctgacaagctgcagctggccaaagaggagatt
gctgagtgggaggccaaggtgacgcagtatgagagggactttgaaagagtttctgctacg
gtgcgcaaggaagtggtgcgctttgagaaggaaaaggccaggaactgtaaaagagagatc
attaattacctggagtgtctgcttcagtctcagcaacagctcataaagtactgggaggct
ttcttaccagaagccaaagctatcgcctaa
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