Eleginops maclovinus (Patagonian blennie): 134876936
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Entry
134876936 CDS
T09869
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134876936 (prpf39)
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134876936 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_10
Focal_AT
PPTA
DSHCT
ARM_TT21_5th
TPR_12
Motif
Other DBs
NCBI-GeneID:
134876936
NCBI-ProteinID:
XP_063758278
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All DBs
Position
15:complement(13262924..13270595)
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AA seq
798 aa
AA seq
DB search
MEDTGLQFLDNTCIGMLDTESPVMESNGDAFLPDLPVLGQTADWSHDQVTPEPLANILPE
DSDESQDAPEQHQKPNEQMNTTELGSVEKAVEQFQIASAQLFQDEQPPPPPPPPPQPEEE
SEQPLYHKPNSGESDQYNQEMTVLPEAATQDNSQEATEAPHVMEEVMELEEQSREATQEL
AVPAEPEPEAPSEFEKLFQACEENPEDFNGWVYLLQYVEQENALPAVRKSFDVFFLRYPY
CYGYWKKYADIEKKHENIQIAEEVYRRGLQAIPLSVDLWLHYLTFIKENSDLSDPETEGR
IRAAYDHAVLAAGTDFHSDRLWESYINWETEQGKLANVTAIYDRILGIPTQLYSQHLQRF
KDHVQNNNPKHFLSEEEFIQMRLELSKASLSAMICESEDKPSTQDDLPPGTEDLADPAKR
VTEIENMRHKVNEVRQEVFNHNEHEVSKRWAFEEAIKRPYFHVKSLEKNQLNNWKEYLDF
EIENGTPERVIVLFERCLIACALYEEFWTKYAKYLEGYSTDGVRHVYKKACTIHLTKKPA
IHLLWAAFEEQQGNVEEARDILKSLEAAVPGLAMVRLRRVSLERRHGNLEEAEALLREAM
ESAKNATETSFYAVKLARQMMKVQRSLSKARKVLLDALEKDQTSPKLYLNLLELEYSGDV
TQNEAEILACFDRALQSQMPLESRLLFCQRKVEFLEDFGSDVNVLGAAYEELQKLQKESE
PTKRKAENGYDSAQEPDSKRQRVDEDPTGAAAAATDPAANNSAYNSWYQQQYGGWGQNSW
GQYNQYAQYNQYYPPPPT
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaagatacgggcctgcaattcttagacaacacttgtattggaatgctcgacactgag
tcccctgtcatggagagcaatggggatgcatttcttcctgaccttccggttctaggccaa
actgcagactggtcccatgaccaggtaactccagaaccactcgcaaacatcttacccgaa
gactccgatgagtcccaggatgctcccgagcaacaccagaaaccaaatgagcagatgaat
accacagagctgggatctgtggagaaggctgtggagcagtttcagattgccagtgctcag
ctcttccaagacgagcagccaccaccaccaccgccgcctccaccccagccagaagaagag
tccgagcagccattataccacaaaccaaactctggagagtctgatcaatacaaccaggag
atgaccgttttgccagaagctgctactcaggataacagtcaagaggcgaccgaggcccca
catgtgatggaagaggttatggagctggaagaacaatccagagaagccacacaagaactg
gctgttcctgcagagcctgagccagaagcgcctagtgagtttgaaaaactctttcaagca
tgtgaggagaacccagaagacttcaatggttgggtctacctgctgcagtatgtggagcaa
gagaatgctcttccagctgtaagaaaatcatttgacgtattcttcctacgctatccctac
tgctatggctactggaagaagtatgctgatattgaaaagaaacacgagaatatacagatt
gcagaagaggtatacagaagaggcttgcaggccatccctctcagtgtggatctgtggctg
cattacctgactttcatcaaagagaactctgatctgagtgacccagagactgagggacgc
attcgagctgcctatgatcatgcagtgcttgcggcaggcacagacttccattcagaccgt
ctgtgggagtcctacatcaactgggagacggagcaggggaaactggctaacgtcaccgcc
atctatgaccgaatcctgggcatcccaacacagctgtattcccagcacctccagaggttt
aaagatcacgtgcagaacaacaaccccaaacactttttgtcagaagaggagttcattcag
atgaggctcgagctctcgaaagccagcctgtcggcgatgatctgcgagagcgaggacaag
ccttccactcaggatgacctaccacctggtaccgaggaccttgcggaccctgctaagaga
gtgacggagatcgagaatatgcgccacaaggtgaacgaggttcgacaggaagtgttcaac
cacaacgaacatgaagtcagcaagcgctgggcctttgaggaagcgattaagagaccctac
ttccacgtcaaatccttagagaagaaccagctgaacaactggaaggagtacctggacttt
gaaattgagaacgggactccggagcgtgtgatcgttctttttgaacgatgcctcatcgcc
tgcgcactctatgaggagttttggaccaagtatgcaaaatatctagagggctacagcact
gatggtgtgagacatgtctacaagaaagcgtgtaccatccacttgaccaagaagccagca
attcacctgctgtgggcggccttcgaggagcagcaaggtaatgtagaggaggctcgtgac
atcctgaagtccctggaggcagcagtccccggtctggccatggtgcgtcttaggagggtc
agtctggagcggcgccacggtaacttggaagaagcagaagcccttttgagggaggccatg
gaatctgcgaagaatgctaccgagacatcgttctacgctgtgaagctggcccggcagatg
atgaaggtgcagagaagtctgagcaaagccaggaaggtgctgctggatgctctcgaaaaa
gaccagacgagtccaaagctgtatctgaacctgcttgagctggaatacagtggagacgtg
acacagaatgaggctgagatcttggcctgtttcgaccgggccctgcagagccagatgccc
ctggaatcccgcctcctcttctgccagcgcaaggttgagttcctcgaggactttggcagt
gacgtcaatgtacttggggctgcgtatgaggaacttcaaaaactacagaaagaaagtgaa
cccacgaagaggaaagccgagaacgggtatgacagtgctcaggagcctgactctaagaga
cagcgggtggacgaggatccaacgggtgcggcagcagcagcgacggacccagcagcaaac
aactctgcatacaacagttggtaccagcaacagtacggtggttggggacaaaactcctgg
ggacagtacaaccaatatgcccagtataaccagtactacccgcctcccccaacataa
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