Eleginops maclovinus (Patagonian blennie): 134877091
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Entry
134877091 CDS
T09869
Symbol
vps18
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04140
Autophagy - animal
emac04148
Efferocytosis
emac05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134877091 (vps18)
04148 Efferocytosis
134877091 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134877091 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134877091 (vps18)
Membrane trafficking [BR:
emac04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134877091 (vps18)
Hops complex
134877091 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_11
zf-RING_16
zf-RING_2
Apolipoprotein
zf-RING_UBOX
DUF5600
zf-RING_5
zf_RING_Vps8
zf-ANAPC11
Lact-deh-memb
zf-rbx1
zf-C3H2C3
zf-RING_Vps41
KNOX2
LETM1_C
DUF4446
DUF1664
Motif
Other DBs
NCBI-GeneID:
134877091
NCBI-ProteinID:
XP_063758538
LinkDB
All DBs
Position
15:12474549..12480972
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AA seq
983 aa
AA seq
DB search
MASILDGYEDSQNTRTISQQHNRLSNANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKDESKVHKLFLDPTGSHLLICL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKQLGNETNTGPVLVGTSQGIIFEAEISA
TEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGGSENKYFIIATTRKRLFQFVGKL
AEGSEQQGFSSIFSQSQDLLPSFQEFPANMGYSEITFYTPKLRNSPKSFGWMMGNGVLYG
QLDYVRPDSLLSDVQVWEYTPDIDINLNKPISIVLTQFHFLLLLHDRVKAICTLNGQEVY
EDLFPDKFGTLKKMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMTKFDLAKEYC
RDRPECMDMVLAKEAEHCFQNKRYIDSAKCYALTQNYFXEIALKFIEAKQEEALKEFLLK
KLNNLKQSERTQITLLVTWLAELYLNSLGQLESDGNSVIFQETRDEFRQFLSSSKHKECL
YNNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALDVLSKHCDQKLFY
KFSPVLMQHIPKKVVDAWIEMGKRLDPKKLIPALMNYSQMGSSQQISETIRYMEFCVYKL
TVTEEAIHNYLLSLYAKYKPDSLLQYLKQAGTHPSEIHYDLKYALRLCAENGYLKACVLV
YRIMELYEEAVDLALQVDVDLAKTCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNC
LSSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIRED
IQEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLTPLKQSRLE
ELQKKLAATTQTSKSRHRPALKDEGDTASLGKGNAGTSREQIKSDMDDIIASECVYCGEL
MIKSIDKPFIDPQKFEEEKSSWL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattcttgacgggtacgaggactctcaaaacaccaggacgatttcgcagcag
cacaaccgcctgtcaaatgccaacatcgggataacacattcaggctttgtgaatgtgaga
ctcgaggaagagaagccgatattcaacaagcagaggatcgattttactccacctgagagg
ataaaccatcttgcagtctgcaacaatcagctatgcatgagtctgggaaaggacaccctg
ctgagaattgatttggccaagccagatcaacctaatcagattgaattaggacgaaaagat
gaaagtaaagtgcacaaactgttcctggaccccactggctcccatctgctcatctgcctg
agcacaagcgagtgtctgtacctaaacaggaacacgcagaaggtgcgcagtctgtcccgc
tggagaggccacctaatcgagagcgtgggctggaacaagcagctgggcaatgagaccaac
acaggacctgtcttagttggcaccagtcaaggcatcatctttgaggcggagatctctgca
actgagggcagcctgttcaacaccaatcctgatcaatacttcagacaggtccactccctg
gaggaggatgggaagcctgcaccagtctgctgcctggaggtggagcgggggggctcggag
aacaagtacttcatcatcgccaccacccgcaaacgcctgttccagtttgtgggtaaattg
gcagaggggtcagagcagcagggcttcagctccatcttcagccagagccaggacctgctg
cccagcttccaggagttcccagccaacatgggctacagcgagatcaccttctacaccccg
aagctccgcaactccccaaagtcgttcggctggatgatgggtaacggagttctttacggt
cagctggactatgtcaggcctgattccctgctgagtgatgtgcaggtatgggagtacacg
cctgacattgacatcaatctgaacaagcccatctccatcgtgctgacccagttccacttc
ctgctgctgctccatgatcgagtaaaggccatctgcaccctgaatggacaggaggtgtat
gaggatttgttcccggataaatttggcacccttaagaagatgattaaggacccagttgga
gggttggtgtggatctacaccgagcgggcggtgttccggtaccacatccagcgcgaggcc
agggacgtctggcagatgtacatgagcatgactaagttcgacctggccaaggagtactgc
cgtgaccggccagagtgcatggacatggttctggccaaggaagccgagcactgcttccag
aacaagcggtacatcgacagcgcaaagtgctatgcgctgacacagaactactttngagag
atagcgctcaagttcatcgaagccaaacaggaagaagccctgaaggagttcttactgaag
aaactgaataatttgaagcagagcgagagaacgcagatcaccctgctggtcacatggctc
gccgagctctacctgaacagcctaggccagctggagagcgacggcaatagcgtcatcttc
caggagacccgtgacgagtttcgacaattcctcagcagctccaagcacaaggagtgtctg
tacaacaaccgcagcaccatttacgacctgctggccagccacggcaacgtggacgacatg
gtgtacttctcggtcgtcatgcaggactacgagcgagtcatttcccactactgccagcac
gacgactacagcgccgctctggatgtgctctccaagcactgcgatcagaagctgttttac
aagttctccccggtcctcatgcagcacattcccaaaaaagtggtagacgcgtggatcgaa
atgggcaagcggctggacccaaagaagctcatcccggctctgatgaactacagccagatg
ggcagctctcagcagatcagcgaaaccatccgctacatggagttctgcgtgtacaagctg
accgtgacggaggaggccatccataactacctgctgtcgctctatgccaagtacaagccg
gactcactgctgcagtatctgaaacaggcggggacgcacccctcagagatccactacgac
ctaaagtacgccctcaggctgtgcgctgaaaatggctacctcaaagcctgtgtgctggtt
tatcggattatggagctgtatgaggaggcagtggatctcgctttacaagtagatgtagac
ttggccaagacgtgtgcggacctgcctgaagatgacgaggagctgaggaagaagctttgg
ctgaagatcgcgcggcatgtggtgcaggaggagaaagatgtgaagaaagccatgaactgt
ctatccagctgcaacctgctcaagattgaagacatcctgcccttcttcccagactttgtc
accattgaccattttaaggaggccatctgcagctccctggaggagtacaaccagcacatc
gaggagctgaagcaggaaatggaggaggccacggagagtgctaaacgcatccgagaggac
atccaggaaatgaggaacaaatatggcgttgtggattcccaagaaaagtgtgctgcatgt
gacttcccgttgctcaacagacccttctatctgttcctgtgtggacacatgttccactac
gactgcctgttccaggaagtgacccctcacctgacgccccttaagcagagtcgtctagag
gagcttcagaaaaagctggccgcaaccacgcaaacctccaagtcacgacatcgcccggcg
ctcaaggacgaaggagacaccgccagtctgggaaagggcaacgctggcacaagccgcgag
cagataaaatcagacatggatgacatcatcgcgtcggaatgtgtgtactgcggcgaactg
atgattaagtccatcgacaagcccttcattgatccacagaaatttgaggaggagaaatcc
agctggttataa
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