Eleginops maclovinus (Patagonian blennie): 134877646
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Entry
134877646 CDS
T09869
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac00260
Glycine, serine and threonine metabolism
emac00630
Glyoxylate and dicarboxylate metabolism
emac00670
One carbon pool by folate
emac01100
Metabolic pathways
emac01200
Carbon metabolism
emac01230
Biosynthesis of amino acids
emac01240
Biosynthesis of cofactors
emac04981
Folate transport and metabolism
Module
emac_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
134877646 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134877646 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134877646 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134877646 (shmt1)
Enzymes [BR:
emac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
134877646 (shmt1)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
134877646
NCBI-ProteinID:
XP_063759302
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Position
16:complement(20470868..20478126)
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AA seq
482 aa
AA seq
DB search
MSLTDGHSVSKETWDSHNKMMMDPLSVSDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRSLETYGLDSDKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPRLIIAGTSCYSRNLDYRRLKLIADENGAFLMGDMAHISGLVAAGVV
PSPFEYCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYQLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQTQVLANCKSLSSALVDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLMQEDFKKVA
EFIHRAIKLTLEVQGSLDPKATLKEFIAALRQGEKFQLRVSEIKAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgactgatggccacagtgtgagcaaagaaacatgggattcacacaacaagatg
atgatggatcctctgtccgtcagcgactctgaggtgttctccatcataaaaaaagagaag
cacaggcagacgtacgggctggagctgatagcgtccgagaactttgccagcagagccgtt
ttagaggctctgggttcctgcatgaacaacaaatactctgaggggtatcccggtcagagg
tactacggtggaacagagcatgtcgatgagctggagagactctgtcagaagaggtcgctg
gagacgtatggtctggactctgacaaatggggcgtcaacgtgcagccttactcaggttcc
cccgctaattttgccgtctacacggccgttgtggagccccacggcaggatcatggggctg
gaccttcctgatgggggtcacctgactcacggcttcatgactgagaagaagaaaatctcg
gcaacgtccatcttctttgagtccatgccgtacaaggtgaatccagagactggctacatt
gattacgacagactgcaagaaaacgcccggctcttccaccccagactcatcatcgccgga
accagctgctattcccgcaacctggactacagacgcctgaagctgatcgctgatgagaac
ggtgcgttcctgatgggagacatggctcacatcagtggactggtggctgcaggagtggtg
ccctcacccttcgagtactgtgacatcgttaccacaacgacacacaagacgctgcgaggc
tgccgcgccggactcatcttctacaggaaaggtgtgcgcagtgtggatgctaaggggaag
gagactctgtaccagttggagtctttgataaatcaggctgtgtttcccgggctgcaggga
ggaccgcacaaccacgctatcgcaggtgttgctgtggctctcaaacaagccatgactcca
gagtttaaggcctaccagacgcaggttcttgctaactgcaaatctctatccagcgccctt
gttgaccacggctacaagatcgtcactggcggctccgacaaccatctgatcctgctcgac
ctgcgcagtaagggaactgatggaggaagagcggagaaggttctggaagcctgtgccatc
gcctgtaataagaacacctgtccaggggataagagtgctctgcgcccgagtggtttgagg
ttcggctctccagctctgacttccagaggcttgatgcaggaagacttcaagaaggtggcc
gagttcattcacagagccatcaagttgaccctggaggtgcaggggagtctggatcctaaa
gccactctgaaggagttcatcgcagcgctgcgtcagggagagaagttccagctgcgggtt
tcagaaatcaaagccgaggtggaggccttcgctggtcagttccccatgcctggcctccct
gagctgtag
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