Eleginops maclovinus (Patagonian blennie): 134877674
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Entry
134877674 CDS
T09869
Symbol
top3a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03440
Homologous recombination
emac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134877674 (top3a)
03460 Fanconi anemia pathway
134877674 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emac03032
]
134877674 (top3a)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134877674 (top3a)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
134877674 (top3a)
DNA replication proteins [BR:
emac03032
]
Eukaryotic type
DNA Topoisomerases
134877674 (top3a)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
134877674 (top3a)
FA (Fanconi anemia) pathway
134877674 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
134877674
NCBI-ProteinID:
XP_063759334
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All DBs
Position
16:20494090..20506932
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AA seq
1048 aa
AA seq
DB search
MLALLGSSLLRSGLQQRLRVIRRCFRVAQSDRCLADTPPPPQQQADMNRGRGQIXRVLCV
AEKNDAAKGIAAIMSGGNARRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLGMEFK
AQFQKWYSCSPVLLFDAEVEKHCPDNMIQIKRTLEKEARQCQALVIWTDCDREGENIGFE
VIDVCKAVKPNMQVFRAKFSEITPNSIRRACDTLIEPDANVSDAVDLRQELDLRIGASFT
RFQTMRLQKIFPQSLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHDVEED
SVEFSWKRNRLFHHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRK
LKISAKETMKIAEKLYTQGYISYPRTETNIFPENLALGPLVEQQTQSQAWGAFAQRVMEQ
PGGPNPRQGKKSDQAHPPIHPTKFTSSLQGNEGRVYEFIVRHFLACVSQDALGHETVVDI
SIAQEIFSASGLMIIARNYLDVYPYERWSAKVIPVYEQGSQFQPSAIEMVDGQTSPPQLL
TEADLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYE
MSKPNLRAELEADLKLVSEGRKDKRIVLQNHIQKYKTVFIESVRKAKKLDEALAPYLGAA
QVIAEEQQQDMEIPLTVRKCPQCSRDMVLKKKREGNSKYLSCTGYPDCKTAVWFPDTVLE
LSRDDSVCPTCQPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRGGG
GGGGGGGRGNGGGRRDDPRLPAPRPPRPDPPRALVSNPRPSLPPVPSWTPQPRPPSGTSS
DAIVCNCGQDAVQLTVRKDGPNQGRQFYKCNAGTCNFFLWADEPGQQGAPLQPAPPRPSL
GFRNGQTGGRGQDGGGGGGGGGGGGGGGGGGGGGQAGQTMCNCNEAAVMRTVQKDGPNKG
RMFHTCGKPREQTCGFFQWSDENEPPPGGGGGGGGFNRGGGGVGGGDGGRKGRKTPAGDA
TKPPAAKKPRSCGICHMPGHTRTTCPQR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgctgctcggtagctctcttcttcgatcaggattacagcagcggctccgggtc
atacggaggtgttttcgcgtggcgcagagtgatcggtgtctggctgacactcctccacca
ccgcagcagcaggcagacatgaaccggggtcggggtcagatcnggagggtcctctgcgtg
gccgagaagaacgatgcagcgaaaggcatcgcagcgatcatgtccggcggcaacgcgagg
aggagagaggggatgtcaaagttcaataaaatctatgagtatgaatatcatctctttggc
cagaatgtgacggtaaccatgacctcagtctccggacatttactgggtatggagtttaaa
gcacagtttcagaagtggtacagttgcagtcctgtgctgttgtttgatgctgaggtagag
aagcactgtccagataacatgatacaaatcaagcggacactagagaaagaggcgaggcag
tgccaggctttagtcatctggaccgattgtgacagagagggagaaaacattggctttgaa
gtcatagatgtctgcaaagcagtgaagcccaatatgcaagtgtttcgggcaaagttttct
gagatcacccccaactccatccggagggcttgtgacacgctaatcgagccggatgctaac
gtgagcgatgctgtcgatctgcggcaggagctggacctgcgaataggtgcgtccttcact
cgcttccagaccatgcgcctgcagaagatcttccctcagtctctggccaatcagctgatc
tcgtacggcagctgtcagtttccaactctgggcttcgtggtggagcgcttcaaagccatc
caggcgttcataccagagacgttctacaaaatcaaagtgctgcacgacgtggaggaggac
tctgtggagttcagttggaaaagaaaccgtctcttccaccacacagcctgcctggtgctc
taccagatctgcatggaggatcccatagcaacagtcacctcagtaaccagcaaacccaag
agcaagtggagaccgctgcctctggacactgtggaaatggagaaactcgcatctcgaaag
ctaaaaataagcgccaaagagacgatgaaaattgcagaaaagctttatacccaggggtac
atcagctaccctcgtacagagacgaacatcttccctgagaacttggctctcggccccctg
gtggagcagcagactcaaagccaggcctggggggcgttcgctcagagggtgatggagcag
cccgggggtcccaacccacgacagggcaagaaatctgaccaggcccatccccccatccac
cccaccaagttcaccagttcactgcagggcaatgaaggacgtgtctatgagttcatcgta
cggcacttcctggcttgtgtatcccaggatgctttggggcatgagactgtggtggacatc
tccatcgctcaggagatcttctccgcctcgggactcatgatcatcgccaggaactacctg
gacgtttacccctacgagaggtggagcgccaaggtgatcccagtgtatgagcagggctct
cagttccagccctctgcgatcgagatggtggacggacagacgagtcctccacagctgctc
actgaggcagacctcatatccctgatggagaaacacggcatcggcactgatgcaactcat
gcagatcacatcgagacgataaagagccgcatgtatgtcggtctgactgctgaccagagg
tttctgcctggagagctcggcatgggactggtggagggttacaactccatgggctatgag
atgtccaaaccgaacctgcgcgcggagctggaggccgacctgaagctggtgtcagaggga
cggaaagacaaacggatcgtcctgcagaaccacatccagaaatacaaaaccgtcttcatc
gagtcggtcaggaaggccaagaagttagatgaagccctggcgccgtatctgggtgccgct
caggtgatcgctgaagaacagcagcaggacatggagatcccgctgactgtcaggaagtgc
cctcagtgcagtcgggacatggtgctgaagaagaagagggaggggaacagtaagtacctg
tcctgtacaggttacccggactgtaagacggcggtgtggttccccgacacagtcctggag
ctcagcagggatgacagcgtctgtcccacctgtcagccccacccggttcacatgttgaag
ttcaagttccgcaggggcagcctccctcccatgatgccgttagagttcgtcggctgcatc
ggtgggtgtgacgagacactcagggaggtgctggacctgaagtacctcagaggcggtgga
ggtggaggaggaggaggaggacgagggaatggcggagggagaagagatgatccccgtctt
ccagctccaagaccccccagaccagatccacccagagccctggtgtcaaaccctcgcccg
tcccttcctcccgtcccctcctggaccccgcagccccgacctccatcaggcaccagcagc
gacgccatcgtgtgtaactgcggtcaggacgcagttcagctgacggtgcgcaaagacgga
cccaaccaaggccgccagttctacaagtgcaacgccgggacctgcaacttcttcctgtgg
gcggacgagccgggccagcagggggccccgctgcagcctgcacctcccagaccctccctg
gggttcaggaacggccaaacgggaggcagagggcaagacgggggaggaggaggaggagga
ggaggaggaggaggaggaggaggaggaggaggaggaggaggacaggcgggacagacgatg
tgtaactgtaacgaggcggcggtgatgcgcacggtgcagaaagacggacccaacaaggga
cgcatgttccacacctgcgggaaacccagagagcagacgtgcggcttcttccagtggtcg
gatgagaacgaacctccaccaggaggaggaggaggaggaggaggatttaacagaggtgga
ggtggtgttggtgggggagacggaggtcggaaagggagaaagaccccagctggagatgct
acaaaacctccagctgcgaagaaaccccgatcctgcggcatctgccacatgccaggacac
acccgcaccacctgtcctcagcggtga
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