Eleginops maclovinus (Patagonian blennie): 134877715
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Entry
134877715 CDS
T09869
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134877715 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134877715 (ddx5)
03009 Ribosome biogenesis [BR:
emac03009
]
134877715 (ddx5)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134877715 (ddx5)
Spliceosome [BR:
emac03041
]
Complex A
U1 snRNP components
U1 related factors
134877715 (ddx5)
Complex B
134877715 (ddx5)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Pre-60S particles
Helicases
134877715 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134877715
NCBI-ProteinID:
XP_063759387
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All DBs
Position
16:23060855..23067418
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AA seq
627 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGSGGPPRFGGHRGGGGGGGGGGKFGNPGERLRKKQWNLDELP
KFEKNFYQQHPDVARRSPQDVELYRRTKIITLKGRDCPNPIAKFHEASFPSYVMDVINKA
GWAEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV
LAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL
ESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED
FLKEYVQINVGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKR
RCDDLTRRMRKDGWPGMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKF
VINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLIAVLREANQAINPKLL
QMAEDRGGRSRGGRGGDYRDDRRDRYSGRRDFGSFRDRDNGRGYDNGPSKSFGSSSQNGG
YGGGSNNGGGAANGYSGAGYNGNGQSSFNNPPGAFGGQSFQTQPFALAKPPQTGASHPPF
PFPQAQAPPQQHPPPLVPYPMPPQFSQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattccgacagagaccgcggcagggatagagacagagggtatggcggcagc
ggagggcctcctcgcttcggcggacaccgcggaggaggtggtggaggaggcggtggagga
aagttcggaaaccctggtgaacggctaaggaagaagcaatggaacctggatgagctccca
aagtttgagaagaacttctaccaacagcatcctgatgttgcccgcaggtctccgcaagat
gttgaactatacagaaggaccaaaatcattacgctgaaggggagagattgcccaaatcct
attgccaaattccacgaggccagcttcccatcctatgtgatggatgtgatcaacaaagca
ggctgggctgaaccgacacccatccaggctcagggctggcctctggctctcagtggaaag
gatatggtcggcattgcacagactggctctggcaagacactctcttatttgttgcctgca
attgtgcacatcaaccaccagcctttcctggagcgtggagacggacccatttgcttggtg
ctagccccgacacgtgagctggctcagcaggtgcaacaggtggcggcagaatacggaaga
gcgtctcgcctcaagtccacatgcatctacgggggagcacccaagggaccccagatccgt
gacctggaaagaggtgtggagatctgcatcgccaccccaggaaggctcatcgacttcctt
gagtctggaaagacaaacctccgccgctgcacttacctcgtgttggacgaggccgacaga
atgctggacatgggcttcgagccacagatccgaaagattgtcgaccaaatcaggcctgac
cgtcagactctgatgtggagtgctacttggcccaaagaggttcgccagctggcagaggac
ttcctgaaggagtacgtccagatcaacgtcggcgcgctgcagctcagtgccaaccacaac
atcctccagatcgtggatgtctgcaacgacggagagaaggaaaacaaactgatccgcctg
ctcgaggaaatcatgagtgaaaaggagaacaagaccatcatctttgtagagaccaagagg
cgttgtgatgatctcaccaggaggatgagaaaggacgggtggcctggtatgggaatccat
ggagataaaagccagcaagaaagagactgggttctcaatgagttcaaatacggaaaggct
ccgattctcattgccacagatgtggcctccaggggtttagatgtggaagatgtgaaattt
gtcatcaactttgactaccccaacaactctgaggactatatccaccgcattggcagaacg
gctcgtagccaaaagacaggcacggcctacaccttcttcactccgaacaacatgcgccag
gcaagcgacctcatcgcggtgctccgcgaggccaaccaggccatcaaccccaagctcctc
cagatggcggaagacagaggaggtcgttcaaggggcggtcgaggtggtgattacagagac
gaccgtcgggataggtattctgggaggcgtgactttggcagttttagggaccgggacaac
ggtagaggttacgacaacggaccaagcaaatcttttggcagcagttcacagaacggaggc
tacgggggcggcagcaacaacggcggcggcgcggctaacggctacagcggggccggctac
aacgggaacggacagtccagctttaacaacccgcccggggccttcggaggccagagcttc
cagacccagcccttcgctctcgctaagccaccacagaccggagccagccacccccccttc
cccttcccccaggcacaggctcctccacagcagcaccccccaccgctggtgccgtaccct
atgcctcctcagttctcgcagtaa
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