Eleginops maclovinus (Patagonian blennie): 134877894
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Entry
134877894 CDS
T09869
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134877894 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134877894 (smarca4a)
03036 Chromosome and associated proteins [BR:
emac03036
]
134877894 (smarca4a)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134877894 (smarca4a)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
134877894 (smarca4a)
Chromatin remodeling factors
BAF complex
134877894 (smarca4a)
PBAF complex
134877894 (smarca4a)
GBAF(ncBAF) complex
134877894 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
BRK
HSA
QLQ
ResIII
HDA2-3
DEAD
Acetyltransf_18
Motif
Other DBs
NCBI-GeneID:
134877894
NCBI-ProteinID:
XP_063759637
LinkDB
All DBs
Position
16:22469743..22491321
Genome browser
AA seq
1645 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSTHSMMGPSPGPPGSGHPHPSQG
PSGYPQENMHQMHKPMEAMHEKGMPDDPRYAQMKGMSMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSDHAPSPVPANGPPSGPMMPGPVSGPMEGGGDPNQGMGQPNRGAPQGPVGPGGA
VVGPGGAGGPAPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQQPMP
NMSPATGPGGGPGAGPGPAQANYNRPHPMGGPNMVPPGPAGVPPGMQGPPTNGPPKSWPE
GPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPALPPPMMLHQ
KQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKAL
RLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERK
RRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKERM
RRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKKKK
KPEAVEGGGLGPDGEPLDETSQMSDLPVKVIHTDSGKILTGMEAPKAGQLETWLEMNPGY
EVAPRSDSEESGSEEEDDEEEEDEEQPHSSAAAAAAAAVEEKKKIPNPDEVPEVDVLHII
EHAKQDVDDEYGSASFNRGLQSYYAVAHAVTERVDNQSTLLINGQLKQYQIKGLEWLVSL
YNNNLNGILADEMGLGKTIQTIGLITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPS
VVKVSYKGSPAARRAFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKN
HHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFA
MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY
RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGYSGG
IVSGPDLYRSSGKFELLDRILPKLRATDHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDG
TTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGCERRAFLQ
AILEHEEQDEVVAQTGGRARGAWQQEEDEVPDDETVNQMIARSEEEFELFMRMDLDRRRE
DARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEK
QWLKAIEEGNLEDIEEEVRHKKTTRKRKKDRDHDSGPATPGSSSGRVRDKDEDGKKAKKR
GRPPAEKLSPNPSALTKKMKKIVDAVIKYKDGNNGRQLSEVFIQLPSRKELPEYYELIRK
PVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQK
IEKEDESEGEDSEEEEDDIDEGSESESESRSVKVKIKLSRKEKGDRGGKSQRRRGRGARA
KPVVSDDDSEEEQEEERSASGSEED
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgaccccccgatgggagggacccctcgtccgggaccctccccaggaccg
gggccatctccgggaggcatgatgggcccgagccccggcccctctccgggctcgacccac
agcatgatgggacccagcccgggacctccaggctccggtcacccccacccttcacaggga
ccctcaggatatcctcaggagaacatgcaccagatgcacaaaccaatggaagccatgcat
gagaagggaatgcccgacgacccccgctatgcccagatgaagggcatgagcatgaggccg
ggggggcacagcgggatgggaccccctccgagccccatggaccaacactcccaaggttac
ccctctccattgggaggctcagaccacgctcccagccccgtcccagctaacggcccgccc
tccggtcccatgatgcccggccctgtatctggccctatggagggcggcggtgatccaaat
caggggatgggtcaaccaaaccgtggagctccccagggtccagttggccccggcggtgct
gtagttggaccgggtggtgctggaggaccagccccattcaaccagaaccagctgcaccag
ctgcgcgctcagatcatggcctacaagatgctggcccgcagccagccgctgcccgaccac
ctgcagatggccgtgcaggggaagaggcccatgccggggatgcagcagcagcccatgccc
aacatgtcgcccgccacggggcccggaggaggaccaggagccggaccgggaccagcacag
gcaaactacaacagaccccatccgatgggggggcctaacatggtgcctcctggacctgca
ggagtcccccccggtatgcaaggcccgcccaccaacggaccccctaaatcctggcctgaa
gggccgatggtgaacgccgccgccccctctaacccccctcagaagctgatccccccacag
cccaccggcagaccctctcccgctccaccctccgtcccccccgccgcctcccctgtgatg
ccccctcagactcagtcccccggtcaacccgccctgccgcctcccatgatgctccaccag
aagcagaaccgcatcactcccatccagaagccccgcgggctggacccggtggagatcctg
caggagagagagtacaggctacaggctcgtattgctcaccgtatccaggagctggagaac
ctgccgggctctctggccggagatctgaggactaaagccaccatcgagctgaaggccctg
aggctgctcaacttccagagacagctgcgtcaggaggtagtggtctgcatgcgtcgggac
acggcgctggaaaccgccctgaacgctaaagcctacaaacgcagcaaacgtcagtctctg
cgtgaagcccgcatcacggagaagctggagaaacagcagaagatcgaacaggagcgcaaa
cgccggcagaaacaccaggaatacctcaacagcatcctgcagcacgccaaggacttcaag
gagtatcaccgctcgatcacggccaagatccagaaggccacgaaggccgtcgccacgtac
cacgccaacacggagcgcgagcagaagaaggagaacgagcgcatcgagaaggagaggatg
aggaggctcatggctgaggatgaggaggggtaccgtaagctgatcgaccagaagaaggac
aagcgtctggcctacctgctgcagcagacggacgagtacgtggccaacctgacggagctg
gtgcgcgctcacaaggccgtgcaggcgctcaaagagaagaagaagaagaagaaaaagaag
aagccagaggctgtggagggaggtggcctgggaccagatggagagcctttggatgagacc
agtcagatgagcgacctgccggtgaaggtcatccacaccgacagcgggaagatcctgacg
gggatggaggctccgaaggccggacagctggagacctggctggagatgaacccaggatac
gaagtggctccgcgttcagacagtgaagaaagcggctcagaagaagaggatgacgaggag
gaagaagacgaggagcagcctcattcctctgcggctgcagcagcagcggcggcagtagag
gagaagaagaagatccccaaccccgacgaagtccctgaagtggacgtcctgcacatcatc
gaacacgctaagcaggatgtggacgacgagtacgggagcgcgagcttcaaccgcggcctg
cagtcgtactacgccgtggctcacgctgtcactgagcgggtggacaaccagtcaacgctg
ctcatcaacggccagctcaagcagtaccagattaaaggcctggagtggctggtgtctctc
tacaacaacaacctgaacggtatcctggctgacgagatgggtttgggaaaaaccatccag
accatcggcctcatcacttacctcatggagtacaagcgcctcaacgggcccttcctcatc
atcgtacctctctcaactttatcaaactgggtctacgagtttgataagtgggccccgtct
gttgtgaaagtgtcctacaagggctctcctgctgcccgccgtgcgttcctccccatcctg
cgcagcggcaaattcaacgtgctgctcaccacgtacgagtacatcatcaaagacaagcag
gtgctagccaagctccgctggaagtacatgatcgtggacgagggccaccggatgaagaac
caccactgtaagctgacgcaggtcctcaacactcactacctggccccccgccgcctgctg
ctcaccggcaccccccttcagaacaagctgcccgagctgtgggcgctgctcaacttcctg
ctgcccaccatcttcaagagctgcaccaccttcgagcagtggttcaacgcccccttcgcc
atgaccggggagaaggtggacctgaacgaagaggaaaccatcctcatcatcaggcgttta
cacaaagtgctccggccgttcctgctgcgccgactcaagaaggaggtggaggctcagctg
ccggagaaggtggagtacgtgataaagtgcgacatgtcggccctgcagagagtcctgtac
cgacacatgcaggccaagggagtgctgctcaccgacggctcagagaaagacaagaagggt
aaaggtggcacgaagaccctgatgaacactatcatgcagctgaggaagatctgcaaccac
ccgtacatgttccagcacatcgaggagagtttctctgagcatctcggctactccggagga
atcgtgagcggccccgacctgtaccgctcctctggtaaattcgagctgctggatcgcatc
ctgcccaaactgagggccacggaccacaaagtgctgctcttctgtcagatgacctcgctc
atgaccatcatggaggactacttcgcctaccgcggcttcaagtacctgcgtctggacgga
accactaaggcggaggaccgtggcatgctgctgaagacgttcaacgacccggcctcggag
tactttgtgttcctgctcagcaccagggccggaggtctgggcctcaacctgcagtccgct
gacaccgtcgtcatcttcgacagcgactggaaccctcaccaggacctgcaggcccaggac
cgagctcaccgcatcgggcagcagaacgaggtgcgcgtcctccgcctctgcaccgtcaac
agcgtggaggagaagatcctggccgccgccaagtacaagctgaacgtggaccagaaggtc
atccaggccggcatgttcgaccagaagtcgtcgggctgcgagcgccgcgccttcctgcag
gccatcctggagcacgaggagcaggacgaggtcgtggcccagacagggggccgtgctcgg
ggggcatggcaacaggaggaggatgaagtccccgatgatgagaccgtcaaccagatgatc
gccaggagtgaagaggagtttgagctgttcatgcgcatggatctagaccggcgccgcgag
gacgcccgcaaccccaagaggaagccgcgtctgatggaggaggacgacatgcccagctgg
atcctgaaggacgacgctgaggtggagaggctgacctgcgaggaagaggaggagaagatg
ttcggccgaggatcccgccaacgcaaggaggtcgactacagcgactcgctcactgagaaa
cagtggctgaaggccatagaggaggggaacctggaggacatcgaggaggaggtgcgtcac
aaaaagacgaccaggaagcgcaagaaggaccgggaccacgacagcggtccggccacgccc
ggctccagcagcggccgagtgcgagacaaagacgaggacggcaagaaggccaagaaacga
ggacgcccccccgcagagaaactctcccccaacccttcggccctcaccaagaagatgaag
aagatcgtggatgccgtcatcaaatataaggacgggaacaacggtcgacagctgagcgaa
gtcttcatccagctgccgtctcgcaaagagctgcccgagtactacgagctcatccgcaaa
cccgtggacttcaggaagatcaaggagaggatccgcagccataagtaccgcagcctgaac
gacctggagaaggacgtgatgctgctttgtcaaaacgcccagaccttcaacctggagggc
tctctgatctacgaggactccatcgtgctgcagtcagtcttcaccagcgtccgacagaag
atcgagaaggaggacgaaagcgagggagaggacagcgaggaagaggaggacgacatcgac
gaaggctccgagtctgagagtgagtctcgctcggtgaaggtgaagatcaagctgagccgg
aaagagaaaggcgatcgggggggaaagagtcagcgacggaggggccgcggagcccgagca
aaacctgtggtgagcgacgacgacagcgaggaggagcaggaagaggagcgttcggccagt
ggcagcgaggaggactga
DBGET
integrated database retrieval system
