Eleginops maclovinus (Patagonian blennie): 134878250
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Entry
134878250 CDS
T09869
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134878250
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134878250
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134878250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134878250
NCBI-ProteinID:
XP_063760231
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Position
16:20783378..20792210
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AA seq
648 aa
AA seq
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MGGSYGDRDRDRGRDRGSSPRYGSSRGGAPSGRKFGNPGERLRKKRWDLDELPKFEKNFY
SEHPEVQRLSQYDVKEFCRKKEITIRGSGCPKPVTHFHQAQFPQHVLDVLMQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRLKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCMESEKDNKLFQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARDLIRVLEEARQAINPKLLQLVDTGR
GGGGGGGGGGRSRFRGGSISNNPNLMYQDECERRLRSVGGGGSAKDSRGSSSSSRRGSSR
DGERSSSSSSSSSYRERSSRDGAGRSYTSTSSYEQYQTNNSSSSSSSGYSSSRGSSGVSV
GGVVPPPTPAPQPLMAKQFNPAQPMMGLMGHSPFQFAPPAPPAPSGRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgggaggttcatacggagacagagaccgagaccgtggccgtgacagaggcagcagccct
cggtacgggtccagcagaggtggcgcaccctcaggtagaaagtttgggaaccccggggag
cgtttacggaagaagagatgggacctggatgagcttcccaaatttgagaagaacttttat
agtgaacatccagaagtgcagcgactgagccagtatgatgtcaaggagttctgcaggaag
aaagaaatcactattcgaggctcaggctgcccaaagccggtcacccacttccatcaggca
cagtttccccaacatgtattggatgtactgatgcagcagaatttcaaggagcccacagct
atccaggcacaaggtttccctctggccctcagtgggagagacatggtgggcattgcacag
actggctctgggaagaccttatcatacctcctgcctgccatagtgcacatcaatcatcag
ccctacttggagcgtggagatggacccatttgcttggttctggcacccacaagagaactg
gcgcagcaggtccagcaggtggcctatgactatggaaagtcctcccgcctcaaaagcact
tgtgtgtatgggggtgctcccaagggacctcaaatcagagacctggagagaggtgttgag
atctgcatcgccactccgggtcgtctgattgacttcctcgaggctggaaagacaaacctg
cggcgctgcacctacttggttctggatgaagctgaccgcatgctggatatgggttttgaa
ccacagattcgcaagattgtggaccagatcaggcctgacagacagaccctgatgtggagc
gctacctggcctaaagatgttcgccagctggcagaggacttcctgaaagactacgttcaa
atcaacgtcggagctctggaactcagcgccaaccacaacatccttcagatagtcgacgtc
tgtatggagagtgagaaggacaacaagttattccagctgatggaggagatcatggcagag
aaagagaacaagaccatcatcttcgtggagaccaagaagcgatgtgacgatctgacacgc
aggatgagacgtgatggttggccggcgatgtgtattcatggcgacaagagtcagccggag
agagactgggtgttatcggagttccgcagcggcaaagctcccatcctcatcgctactgac
gtggcctcgcgtggtttggacgtggaggatgtgaagtttgtcatcaactacgactacccc
aactcctcggaggattacatccatcgcatcggccgcacggcccgcagcaccaacaagggc
accgcctacaccttcttcaccccggggaacctccgccaggcccgagacctgatccgcgtt
ctggaggaggcgcggcaggccatcaaccccaaactgctgcagctggtggacaccggacgt
ggaggaggaggggggggagggggaggaggccgttctcgcttccgtggcggctccatctcc
aacaaccccaacctgatgtatcaggacgagtgtgagcggcggctgcgttcagtgggtgga
ggcggcagcgccaaggacagccgcggcagcagcagcagcagccgcagagggagcagccgg
gacggggagcgctcttcctcctcctcgtcttcctcctcttacagggagcgcagcagcagg
gacggagcgggacgcagctacacctccacctccagctacgagcagtaccagaccaacaac
agcagcagcagcagcagcagcgggtacagcagctccagaggcagctcaggggtcagcgtg
gggggggtggtgccgcctcctactccggcccctcagcctctcatggccaagcagttcaac
cccgcccagcccatgatgggtctgatggggcactcgccgttccagtttgctcctccagcg
ccacccgctccatcaggcagaaagtaa
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